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The map label for this gene is nudJ [H]

Identifier: 34498856

GI number: 34498856

Start: 3695511

End: 3695978

Strand: Direct

Name: nudJ [H]

Synonym: CV_3401

Alternate gene names: 34498856

Gene position: 3695511-3695978 (Clockwise)

Preceding gene: 34498855

Following gene: 34498857

Centisome position: 77.78

GC content: 66.24

Gene sequence:

>468_bases
ATGATTGTCAATAACAAACCGCGGCAGTGGAAGCCGAATGCCACAGTCGCCGCCATCATCGAACGCGATGGCCGCTTCCT
GATGGTCGAGGAGGAAACGCCGGCCGGACTGCGCCTCAACCAGCCCGCCGGTCACCTGGAGCGCGGCGAGACGCTGCTGC
AGGCGGTCGCGCGCGAGGCGCTGGAAGAAAGCGGCTGGCTGTTCGCGCCGCGCGGACTCACCGGCATCTACCTGGCCGAC
GCCCAGGACGGCGACGTCACCTATATGCGCTTCGCCTTCCACGGCGACGCCACTCCCCCCGCCGCCCCGCCGCGACTGGA
CGCCGGCATCGTCGCCGTGCACTGGCTCTCCTTCGAAGACATCGCCGCCCAGCAAACACGGCTTCGCAGCCCCGTGGTAT
CGCAATGCCTGCAAGACTATCTCAATGGCATCGCGTATCCTCTGCAACTGATACGCGACCTGCGCTGA

Upstream 100 bases:

>100_bases
TCTGGCTGTCGGTCACTGCATTGCACAAGCAGACATACATCGGAAGCCCCCTCTGGCTTACAATCAAGAATAGTTATCAT
CATCATAGAGACAGACAAGA

Downstream 100 bases:

>100_bases
CCCACCCGCCACAGGATGCCCGATGCGACTGCTGATGCCGCTGCTGCTTGCCCTGCTCCTTCCCGCCGCCCGCGCCGACG
GCTTAAACATCTGTTATCAT

Product: MutT-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIVNNKPRQWKPNATVAAIIERDGRFLMVEEETPAGLRLNQPAGHLERGETLLQAVAREALEESGWLFAPRGLTGIYLAD
AQDGDVTYMRFAFHGDATPPAAPPRLDAGIVAVHWLSFEDIAAQQTRLRSPVVSQCLQDYLNGIAYPLQLIRDLR

Sequences:

>Translated_155_residues
MIVNNKPRQWKPNATVAAIIERDGRFLMVEEETPAGLRLNQPAGHLERGETLLQAVAREALEESGWLFAPRGLTGIYLAD
AQDGDVTYMRFAFHGDATPPAAPPRLDAGIVAVHWLSFEDIAAQQTRLRSPVVSQCLQDYLNGIAYPLQLIRDLR
>Mature_155_residues
MIVNNKPRQWKPNATVAAIIERDGRFLMVEEETPAGLRLNQPAGHLERGETLLQAVAREALEESGWLFAPRGLTGIYLAD
AQDGDVTYMRFAFHGDATPPAAPPRLDAGIVAVHWLSFEDIAAQQTRLRSPVVSQCLQDYLNGIAYPLQLIRDLR

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=144, Percent_Identity=37.5, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 17219; Mature: 17219

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNNKPRQWKPNATVAAIIERDGRFLMVEEETPAGLRLNQPAGHLERGETLLQAVAREA
CCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHH
LEESGWLFAPRGLTGIYLADAQDGDVTYMRFAFHGDATPPAAPPRLDAGIVAVHWLSFED
HHHCCCEEECCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCHHH
IAAQQTRLRSPVVSQCLQDYLNGIAYPLQLIRDLR
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVNNKPRQWKPNATVAAIIERDGRFLMVEEETPAGLRLNQPAGHLERGETLLQAVAREA
CCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHH
LEESGWLFAPRGLTGIYLADAQDGDVTYMRFAFHGDATPPAAPPRLDAGIVAVHWLSFED
HHHCCCEEECCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCHHH
IAAQQTRLRSPVVSQCLQDYLNGIAYPLQLIRDLR
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA