| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498847
Identifier: 34498847
GI number: 34498847
Start: 3685251
End: 3687302
Strand: Direct
Name: 34498847
Synonym: CV_3392
Alternate gene names: NA
Gene position: 3685251-3687302 (Clockwise)
Preceding gene: 34498844
Following gene: 34498853
Centisome position: 77.57
GC content: 65.3
Gene sequence:
>2052_bases ATGTCCGCCTATCGTGAAACATCTTGCCGGGAGACACCCCATGCGCATCGCCATTCCGCCGCTCCTGTACACCCTGCTGG CAGCGGCATCGATCCAGGCCGCCCCCGCTCCCGACCACCCGCGCGTGCCGCCCGACGAAGCGTTCCAAGCCTGCAACGGC AAGAAAGCCGGCGATGCCGTCACCTTCACCACCCCGCGCGGCGAGAAAATGAGCGGCAAATGCAGAATGATGCCGGCCCG GATGGCGGCCGTGCCCGACCATCCGCCCCCGCCGCCGGAAGGAAAGGCCCCGCCCCCGCCGCAATAGGCGCGGCACGAAA AAAAAACGGCGCGGCCTGCCCGGACCGCGCCGTCCTCATGCGCTCATTTGGCCAGCACGCCCTCCCACAGCCGGTTCAGT TGGGGGTCGGTGAACGGCTTGATGCTTTCGTAGATGTGGCTGACGCCCACCGTAGCCTTGGCGTTGGTGTCGGTCGCCTT GCCGGCGTTGTGGCAGGAGAAGCAGTTGTACAGCTTGTTGCCCAGGGTGACATAGGTTTCCATCGTCGAATTGGCCAGCG CGTTGCCGCCGACGTGATTGGGCTGGTTGTTGCCGCCGGCAGCCTGGAACGGGTTGTACGGATCATTGCCGCCATTGGTC CAGGTGGCGCCGATCAGCAGATAGTTGCGCCGGGTATCGCCTTGTTTCAGCAGGCTGCGGACGCTGTTGTTGATCGAAAT CACCTCGCTGTTGGCCTGCGCCGCGCTCTGCGCCGGCTGTATCGGCAAAGCGGCGGACACCCCCCAGGGGAAGGTGCGCA GGGTGTCGCTGGGCGAAACGGTCTGTCCGCTGCTGGCCCTGACCGTGAGCGGACTGGCATCGGGATCGACATACATGTGC TGGACGTTGAACGGCCCGGTCGCGCCATTGGCCGAGAACAGCATGCCCTTGGGCACTTCCTGCGGCACCGCCACCGTCGC GCCCTGGGCGTTGATGTAGGAATAGGCGCCATTGGGCGAGTTGCTGTCATGCTCGAACGTGGCCCAGATCATTTCCGGGT GCCCGGCGGCGCTGCCGACCACATGCAGGCCCACCAGCGCCAGCAGCGCCTGGCGGCTGCCGGTCTGCACCCATTTCTGC GAATCGCGGGTATCGAACACCGGAATCTCGCCCACGGTGGTGATATAGCGATTGGTATCCAGGCCGTCCGCCTCCACCCA GGAGGCTTTCAATTCCAGCGCCAGCGCGTCGGCATCCGGCACCCGGTGATGGTGCTGCTTGGCCCAGGCCAGCACCTTGT CCAGCTCGGCCTGAGTGGTGGGGAAGCGCAGCCTGGGATTCTTGGTGCCGCTGGCCGAGGCAAAGAAGGCGTACACGTCG TTGACCAGGATGGTGTAGTAGACCATCTTGCCGCCCCGCCCCATCAGCGCGGCGCCGTCGGCCTGCTGGGGGCCGCTGCC GTCGGCCTGGGTGACCCCGCTATCCTTGTCCACCGCATCGGTCTTGTCGAAGCGCGGCTTGTTCACCCGGATGCTGAACA GCGATGCCGGCTTGCCGCCGCAGGTGTTCACGCCCAGCTCGCGATTGACCAGGCAGCGCGCCTTGCCGTCGTCGCTGTTC AGCACGCTGTAGAACGCCACCGAGTCCATCACCGTGCCGTTGCCGCCGAACAAGCGCATCGGCGAGGAGGTCAGCCACAG GAACATCCGCTGCGACCACTGGTAGAAATTGCAATTGATGGTCTTGTTGCTGGCCGGCGGATTGACGGTGTCGTGGTTGA ACTTGACGCTGTTGGCCGGCGTGACCACGCCGTTGGGCGTCACCCGGTCGAACAGGAACCAGCTTTGGAATATGGCCGGG CTCACCGTACAGGTGGCCGCGGCGTCCGCCGGAACCAGGTTTTGCGCCTGGCTGGCGCCGCCGGCCAGGCAGGCCAGCAA GATCGCGGATGCCGCCGGCGCGCCGGCGATAGCTTTGCGGATGAACATTCTGCGTATCTCCCTGTAAGCATTAGGGCCAG CGGCAAAGCGGCTGGACATGGAAAAGGCGCTCATTCAAGCCTGCAGCCCTGA
Upstream 100 bases:
>100_bases AAAAAATCAATGAATTACATTCACTTGTACGACGTTTTTAAAGTAAAAAATCAGACAAAAACTGTTCTGAAGATCAGGAG TCATCTTGTTCTTCATGCAA
Downstream 100 bases:
>100_bases ATGAAGCGCCTATATCCGTTCTAGCGAAGGGGAAATGACGTTTCAATTGATAAATAACTAGTTGAAATTACTTAGGAATA CAGCCTGGACAGGCACGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 683; Mature: 682
Protein sequence:
>683_residues MSAYRETSCRETPHAHRHSAAPVHPAGSGIDPGRPRSRPPARAARRSVPSLQRQESRRCRHLHHPARRENERQMQNDAGP DGGRARPSAPAAGRKGPAPAAIGAARKKNGAACPDRAVLMRSFGQHALPQPVQLGVGERLDAFVDVADAHRSLGVGVGRL AGVVAGEAVVQLVAQGDIGFHRRIGQRVAADVIGLVVAAGSLERVVRIIAAIGPGGADQQIVAPGIALFQQAADAVVDRN HLAVGLRRALRRLYRQSGGHPPGEGAQGVAGRNGLSAAGPDRERTGIGIDIHVLDVERPGRAIGREQHALGHFLRHRHRR ALGVDVGIGAIGRVAVMLERGPDHFRVPGGAADHMQAHQRQQRLAAAGLHPFLRIAGIEHRNLAHGGDIAIGIQAVRLHP GGFQFQRQRVGIRHPVMVLLGPGQHLVQLGLSGGEAQPGILGAAGRGKEGVHVVDQDGVVDHLAAPPHQRGAVGLLGAAA VGLGDPAILVHRIGLVEARLVHPDAEQRCRLAAAGVHAQLAIDQAARLAVVAVQHAVERHRVHHRAVAAEQAHRRGGQPQ EHPLRPLVEIAIDGLVAGRRIDGVVVELDAVGRRDHAVGRHPVEQEPALEYGRAHRTGGRGVRRNQVLRLAGAAGQAGQQ DRGCRRRAGDSFADEHSAYLPVSIRASGKAAGHGKGAHSSLQP
Sequences:
>Translated_683_residues MSAYRETSCRETPHAHRHSAAPVHPAGSGIDPGRPRSRPPARAARRSVPSLQRQESRRCRHLHHPARRENERQMQNDAGP DGGRARPSAPAAGRKGPAPAAIGAARKKNGAACPDRAVLMRSFGQHALPQPVQLGVGERLDAFVDVADAHRSLGVGVGRL AGVVAGEAVVQLVAQGDIGFHRRIGQRVAADVIGLVVAAGSLERVVRIIAAIGPGGADQQIVAPGIALFQQAADAVVDRN HLAVGLRRALRRLYRQSGGHPPGEGAQGVAGRNGLSAAGPDRERTGIGIDIHVLDVERPGRAIGREQHALGHFLRHRHRR ALGVDVGIGAIGRVAVMLERGPDHFRVPGGAADHMQAHQRQQRLAAAGLHPFLRIAGIEHRNLAHGGDIAIGIQAVRLHP GGFQFQRQRVGIRHPVMVLLGPGQHLVQLGLSGGEAQPGILGAAGRGKEGVHVVDQDGVVDHLAAPPHQRGAVGLLGAAA VGLGDPAILVHRIGLVEARLVHPDAEQRCRLAAAGVHAQLAIDQAARLAVVAVQHAVERHRVHHRAVAAEQAHRRGGQPQ EHPLRPLVEIAIDGLVAGRRIDGVVVELDAVGRRDHAVGRHPVEQEPALEYGRAHRTGGRGVRRNQVLRLAGAAGQAGQQ DRGCRRRAGDSFADEHSAYLPVSIRASGKAAGHGKGAHSSLQP >Mature_682_residues SAYRETSCRETPHAHRHSAAPVHPAGSGIDPGRPRSRPPARAARRSVPSLQRQESRRCRHLHHPARRENERQMQNDAGPD GGRARPSAPAAGRKGPAPAAIGAARKKNGAACPDRAVLMRSFGQHALPQPVQLGVGERLDAFVDVADAHRSLGVGVGRLA GVVAGEAVVQLVAQGDIGFHRRIGQRVAADVIGLVVAAGSLERVVRIIAAIGPGGADQQIVAPGIALFQQAADAVVDRNH LAVGLRRALRRLYRQSGGHPPGEGAQGVAGRNGLSAAGPDRERTGIGIDIHVLDVERPGRAIGREQHALGHFLRHRHRRA LGVDVGIGAIGRVAVMLERGPDHFRVPGGAADHMQAHQRQQRLAAAGLHPFLRIAGIEHRNLAHGGDIAIGIQAVRLHPG GFQFQRQRVGIRHPVMVLLGPGQHLVQLGLSGGEAQPGILGAAGRGKEGVHVVDQDGVVDHLAAPPHQRGAVGLLGAAAV GLGDPAILVHRIGLVEARLVHPDAEQRCRLAAAGVHAQLAIDQAARLAVVAVQHAVERHRVHHRAVAAEQAHRRGGQPQE HPLRPLVEIAIDGLVAGRRIDGVVVELDAVGRRDHAVGRHPVEQEPALEYGRAHRTGGRGVRRNQVLRLAGAAGQAGQQD RGCRRRAGDSFADEHSAYLPVSIRASGKAAGHGKGAHSSLQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71994; Mature: 71863
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYRETSCRETPHAHRHSAAPVHPAGSGIDPGRPRSRPPARAARRSVPSLQRQESRRCR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH HLHHPARRENERQMQNDAGPDGGRARPSAPAAGRKGPAPAAIGAARKKNGAACPDRAVLM HHCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHH RSFGQHALPQPVQLGVGERLDAFVDVADAHRSLGVGVGRLAGVVAGEAVVQLVAQGDIGF HHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHH HRRIGQRVAADVIGLVVAAGSLERVVRIIAAIGPGGADQQIVAPGIALFQQAADAVVDRN HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH HLAVGLRRALRRLYRQSGGHPPGEGAQGVAGRNGLSAAGPDRERTGIGIDIHVLDVERPG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC RAIGREQHALGHFLRHRHRRALGVDVGIGAIGRVAVMLERGPDHFRVPGGAADHMQAHQR HHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCCCCEECCCCCHHHHHHHHH QQRLAAAGLHPFLRIAGIEHRNLAHGGDIAIGIQAVRLHPGGFQFQRQRVGIRHPVMVLL HHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHCCCCCCEEEEE GPGQHLVQLGLSGGEAQPGILGAAGRGKEGVHVVDQDGVVDHLAAPPHQRGAVGLLGAAA CCCHHHHHCCCCCCCCCCCEEECCCCCCCCCEEECCCCCHHHHCCCCCCCCCHHHHHHHH VGLGDPAILVHRIGLVEARLVHPDAEQRCRLAAAGVHAQLAIDQAARLAVVAVQHAVERH HCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RVHHRAVAAEQAHRRGGQPQEHPLRPLVEIAIDGLVAGRRIDGVVVELDAVGRRDHAVGR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC HPVEQEPALEYGRAHRTGGRGVRRNQVLRLAGAAGQAGQQDRGCRRRAGDSFADEHSAYL CCCCCCCHHHHCCHHCCCCCCCCHHHHHEEECCCCCCCCCHHHHHHHCCCCCHHCCCCEE PVSIRASGKAAGHGKGAHSSLQP EEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SAYRETSCRETPHAHRHSAAPVHPAGSGIDPGRPRSRPPARAARRSVPSLQRQESRRCR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH HLHHPARRENERQMQNDAGPDGGRARPSAPAAGRKGPAPAAIGAARKKNGAACPDRAVLM HHCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHH RSFGQHALPQPVQLGVGERLDAFVDVADAHRSLGVGVGRLAGVVAGEAVVQLVAQGDIGF HHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHH HRRIGQRVAADVIGLVVAAGSLERVVRIIAAIGPGGADQQIVAPGIALFQQAADAVVDRN HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH HLAVGLRRALRRLYRQSGGHPPGEGAQGVAGRNGLSAAGPDRERTGIGIDIHVLDVERPG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC RAIGREQHALGHFLRHRHRRALGVDVGIGAIGRVAVMLERGPDHFRVPGGAADHMQAHQR HHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCCCCEECCCCCHHHHHHHHH QQRLAAAGLHPFLRIAGIEHRNLAHGGDIAIGIQAVRLHPGGFQFQRQRVGIRHPVMVLL HHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHCCCCCCEEEEE GPGQHLVQLGLSGGEAQPGILGAAGRGKEGVHVVDQDGVVDHLAAPPHQRGAVGLLGAAA CCCHHHHHCCCCCCCCCCCEEECCCCCCCCCEEECCCCCHHHHCCCCCCCCCHHHHHHHH VGLGDPAILVHRIGLVEARLVHPDAEQRCRLAAAGVHAQLAIDQAARLAVVAVQHAVERH HCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RVHHRAVAAEQAHRRGGQPQEHPLRPLVEIAIDGLVAGRRIDGVVVELDAVGRRDHAVGR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC HPVEQEPALEYGRAHRTGGRGVRRNQVLRLAGAAGQAGQQDRGCRRRAGDSFADEHSAYL CCCCCCCHHHHCCHHCCCCCCCCHHHHHEEECCCCCCCCCHHHHHHHCCCCCHHCCCCEE PVSIRASGKAAGHGKGAHSSLQP EEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA