| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ppK [H]
Identifier: 34498812
GI number: 34498812
Start: 3652772
End: 3654850
Strand: Direct
Name: ppK [H]
Synonym: CV_3357
Alternate gene names: 34498812
Gene position: 3652772-3654850 (Clockwise)
Preceding gene: 34498811
Following gene: 34498813
Centisome position: 76.88
GC content: 65.61
Gene sequence:
>2079_bases ATGTCACAACCGCAAGACCTGCTGCTGAACCGTGAACTGGGACTGATAGAATTCAACCGCCGCGTGCTGGCCCAGGCGGA AGACCCGGACCTGCCGCTGCTGGAGCGCCTGAAGTTCCTGTGCATCGTCTCCTCCAACCTGGACGAATTCTTCGAAGTCC GCGTCGCCTGGCTGCAAGACGCCGCCCACGCCACGCCCGACCGCATCCTGGCGGATGGCTCCACGCCGGAGCAGGCGCTG GCCAAGGTGTCCCGCGCCAGCCACCAGCTGGTGCGCGAGCAATACGCGGTGATGAGCGAGGTGCTGTTCCCGGCGCTGCG CGAACAGGGCATCGTGTTCTTGCGCCGCAGCGAGTGGACCGAGCAGCAGCAGGAATGGGTGAAAAACTACTTCTTCCGCG AGCTGATGCCCATCCTGACGCCGATCGGGCTCGATCCGTCCCACCCCTTCCCCAAGGTATTGAACAAATCGCTCAACTTC GCGGTGGAGCTGGAAGGCCGCGACGCCTTCGGCCGCGCGTCCGGCACCGCCATCGTGCAGGCGCCGCGCATCCTGCCGCG CGTGATCAAGCTGCCGGCCGACGTCTGCGACGGCCGCCCGCACTGCTTCGTGTTCCTGTCGTCGATACTGCACTCGCACG TGCACGAGCTGTTCCCCGGCATGGCGGTCAAGGGCTGCTACCAGTTCCGCGTGACCCGCGACAGCGAACTGTCGGTCGAC GACGACGACTTCAAGAACCTGCGCACCGCGCTGCAGGGCGAACTGCGCCAGCGCCAGTTCGGCGACGCGGTGCGGCTGGA GATCGCCGATACCTGCCCGCAACACATGGAATCCTTCCTGCTGACCCAGTTCAACCTGCAGCCGCGCGACGTCTACCGCG TCAACGGCCCGGTGAACCTGGTGCGGCTAATGCAGGTGCCCGACCTGGTGGACCGCGCCGATCTCAAGTTCGCGCCGTTC ACGCCGACGCTGCCGGCCAATCTGCAGAAGAAGTCCAAGTCCTCGCTGTTCGACGTCATCCGCAAGGGCGACGTGCTGCT GCACCACCCGTACCAGAGCTTCCAGCCGGTGATCGACTTCCTCACCCAGGCGGCGACCGATCCGCACGTGGTGGCCATCA AGATGACGGTGTACCGCACCGGCACCGACTCGGTGCTGATGGAGTCGCTGATCGCCGCCGCCCGCGCCGGCAAGCAGGTG ACGGTGGTGGTGGAGCTGATGGCCCGCTTCGACGAAGAGGCCAACATCGGCTGGGCCAGCCGGCTGGAAGACGCCGGCGC CCACGTGGTCTACGGCGTGATCGGCTACAAAGTGCACGCCAAGATGCTGATGGTGGTGCGCCGCGAGGCCCACGGCCTGC ACCGCTACGTGCATCTGGGCACCGGCAACTACCACCCGCGCACCGCGCGCTTGTACACCGACTTCGGCCTGTTGACCTGC AACGAGGAAATCGCCAGCGACGTCAACGACATTTTCATCCAGCTCACCGGCCTGGGACGCGCCGGCAGCCTGAAGCGGCT GTTCCAGAGCCCGTTCACGCTGCACAGCATGATCATGGAGGCGATACAGCGCGAGACCGAGCACGCGCAGGCCGGCAAGC CGGCGCAGATCATCGCCAAGATGAACTCGCTGCTGGAGCCGCAGGTGATCCACGCGCTGTACCGCGCCAGCCAGGCCGGG GTGAAGATCCAGCTGATCGTGCGCGGCGTGTGCGCGCTGCGGCCGGGCGTGCCGGGGCTGTCGGACAATATCACCGTCCG CTCCATCGTCGGCCGCTTCCTCGAACACCCGCGCGTGTTCTACTTCTACAACGATCACAAGGAAGACCTGCTGATGTCCA GCGCCGACTGGATGGGTCGCAACTTCTTCCGCCGCATCGAGACCTGCGCGCCTATCCTGGACAACAAGTTGAAGCGCCGC ATCATCAAGGAGGCGCTGCGCCTGTATCTGGAAGACAACGTCAACAGCTGGGAAATGCTGCCGGACGGCGGCTACAAGCG CCGGACCAGCCGCGGCAAGCCGCACTGCGCGCAGCGCGAGCTGCTGGCCTCCTATACCGGCAATCCGGAAGCGGAATAA
Upstream 100 bases:
>100_bases CCGGCGGGCTATACGCCGCCGCAGAACTAAAGCCGTGAACAAGCCCTCCAAGCGAGGGCTTTATTGTTTCCGATCACCGT CATTTTGGCTCGCATACCGT
Downstream 100 bases:
>100_bases GCGCATGGAAATCCTCGGCTATCTCATCGCCGCGCTGATGGTGCTGGCCGGCCTCGCCGGCACCATCCTGCCGGCCATCC CCGGCTTGCCGCTGATGTTC
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 692; Mature: 691
Protein sequence:
>692_residues MSQPQDLLLNRELGLIEFNRRVLAQAEDPDLPLLERLKFLCIVSSNLDEFFEVRVAWLQDAAHATPDRILADGSTPEQAL AKVSRASHQLVREQYAVMSEVLFPALREQGIVFLRRSEWTEQQQEWVKNYFFRELMPILTPIGLDPSHPFPKVLNKSLNF AVELEGRDAFGRASGTAIVQAPRILPRVIKLPADVCDGRPHCFVFLSSILHSHVHELFPGMAVKGCYQFRVTRDSELSVD DDDFKNLRTALQGELRQRQFGDAVRLEIADTCPQHMESFLLTQFNLQPRDVYRVNGPVNLVRLMQVPDLVDRADLKFAPF TPTLPANLQKKSKSSLFDVIRKGDVLLHHPYQSFQPVIDFLTQAATDPHVVAIKMTVYRTGTDSVLMESLIAAARAGKQV TVVVELMARFDEEANIGWASRLEDAGAHVVYGVIGYKVHAKMLMVVRREAHGLHRYVHLGTGNYHPRTARLYTDFGLLTC NEEIASDVNDIFIQLTGLGRAGSLKRLFQSPFTLHSMIMEAIQRETEHAQAGKPAQIIAKMNSLLEPQVIHALYRASQAG VKIQLIVRGVCALRPGVPGLSDNITVRSIVGRFLEHPRVFYFYNDHKEDLLMSSADWMGRNFFRRIETCAPILDNKLKRR IIKEALRLYLEDNVNSWEMLPDGGYKRRTSRGKPHCAQRELLASYTGNPEAE
Sequences:
>Translated_692_residues MSQPQDLLLNRELGLIEFNRRVLAQAEDPDLPLLERLKFLCIVSSNLDEFFEVRVAWLQDAAHATPDRILADGSTPEQAL AKVSRASHQLVREQYAVMSEVLFPALREQGIVFLRRSEWTEQQQEWVKNYFFRELMPILTPIGLDPSHPFPKVLNKSLNF AVELEGRDAFGRASGTAIVQAPRILPRVIKLPADVCDGRPHCFVFLSSILHSHVHELFPGMAVKGCYQFRVTRDSELSVD DDDFKNLRTALQGELRQRQFGDAVRLEIADTCPQHMESFLLTQFNLQPRDVYRVNGPVNLVRLMQVPDLVDRADLKFAPF TPTLPANLQKKSKSSLFDVIRKGDVLLHHPYQSFQPVIDFLTQAATDPHVVAIKMTVYRTGTDSVLMESLIAAARAGKQV TVVVELMARFDEEANIGWASRLEDAGAHVVYGVIGYKVHAKMLMVVRREAHGLHRYVHLGTGNYHPRTARLYTDFGLLTC NEEIASDVNDIFIQLTGLGRAGSLKRLFQSPFTLHSMIMEAIQRETEHAQAGKPAQIIAKMNSLLEPQVIHALYRASQAG VKIQLIVRGVCALRPGVPGLSDNITVRSIVGRFLEHPRVFYFYNDHKEDLLMSSADWMGRNFFRRIETCAPILDNKLKRR IIKEALRLYLEDNVNSWEMLPDGGYKRRTSRGKPHCAQRELLASYTGNPEAE >Mature_691_residues SQPQDLLLNRELGLIEFNRRVLAQAEDPDLPLLERLKFLCIVSSNLDEFFEVRVAWLQDAAHATPDRILADGSTPEQALA KVSRASHQLVREQYAVMSEVLFPALREQGIVFLRRSEWTEQQQEWVKNYFFRELMPILTPIGLDPSHPFPKVLNKSLNFA VELEGRDAFGRASGTAIVQAPRILPRVIKLPADVCDGRPHCFVFLSSILHSHVHELFPGMAVKGCYQFRVTRDSELSVDD DDFKNLRTALQGELRQRQFGDAVRLEIADTCPQHMESFLLTQFNLQPRDVYRVNGPVNLVRLMQVPDLVDRADLKFAPFT PTLPANLQKKSKSSLFDVIRKGDVLLHHPYQSFQPVIDFLTQAATDPHVVAIKMTVYRTGTDSVLMESLIAAARAGKQVT VVVELMARFDEEANIGWASRLEDAGAHVVYGVIGYKVHAKMLMVVRREAHGLHRYVHLGTGNYHPRTARLYTDFGLLTCN EEIASDVNDIFIQLTGLGRAGSLKRLFQSPFTLHSMIMEAIQRETEHAQAGKPAQIIAKMNSLLEPQVIHALYRASQAGV KIQLIVRGVCALRPGVPGLSDNITVRSIVGRFLEHPRVFYFYNDHKEDLLMSSADWMGRNFFRRIETCAPILDNKLKRRI IKEALRLYLEDNVNSWEMLPDGGYKRRTSRGKPHCAQRELLASYTGNPEAE
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=644, Percent_Identity=35.4037267080745, Blast_Score=382, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 78431; Mature: 78300
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPQDLLLNRELGLIEFNRRVLAQAEDPDLPLLERLKFLCIVSSNLDEFFEVRVAWLQD CCCCHHHHHCCCCCCEECCCHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH AAHATPDRILADGSTPEQALAKVSRASHQLVREQYAVMSEVLFPALREQGIVFLRRSEWT HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCH EQQQEWVKNYFFRELMPILTPIGLDPSHPFPKVLNKSLNFAVELEGRDAFGRASGTAIVQ HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCEEEE APRILPRVIKLPADVCDGRPHCFVFLSSILHSHVHELFPGMAVKGCYQFRVTRDSELSVD CHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCC DDDFKNLRTALQGELRQRQFGDAVRLEIADTCPQHMESFLLTQFNLQPRDVYRVNGPVNL CHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCEEEECCCHHH VRLMQVPDLVDRADLKFAPFTPTLPANLQKKSKSSLFDVIRKGDVLLHHPYQSFQPVIDF HHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH LTQAATDPHVVAIKMTVYRTGTDSVLMESLIAAARAGKQVTVVVELMARFDEEANIGWAS HHHCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHH RLEDAGAHVVYGVIGYKVHAKMLMVVRREAHGLHRYVHLGTGNYHPRTARLYTDFGLLTC HHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEECCCEEEE NEEIASDVNDIFIQLTGLGRAGSLKRLFQSPFTLHSMIMEAIQRETEHAQAGKPAQIIAK CHHHHCCHHHEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH MNSLLEPQVIHALYRASQAGVKIQLIVRGVCALRPGVPGLSDNITVRSIVGRFLEHPRVF HHHHCCHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEE YFYNDHKEDLLMSSADWMGRNFFRRIETCAPILDNKLKRRIIKEALRLYLEDNVNSWEML EEECCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC PDGGYKRRTSRGKPHCAQRELLASYTGNPEAE CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure SQPQDLLLNRELGLIEFNRRVLAQAEDPDLPLLERLKFLCIVSSNLDEFFEVRVAWLQD CCCHHHHHCCCCCCEECCCHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH AAHATPDRILADGSTPEQALAKVSRASHQLVREQYAVMSEVLFPALREQGIVFLRRSEWT HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCH EQQQEWVKNYFFRELMPILTPIGLDPSHPFPKVLNKSLNFAVELEGRDAFGRASGTAIVQ HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCEEEE APRILPRVIKLPADVCDGRPHCFVFLSSILHSHVHELFPGMAVKGCYQFRVTRDSELSVD CHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCC DDDFKNLRTALQGELRQRQFGDAVRLEIADTCPQHMESFLLTQFNLQPRDVYRVNGPVNL CHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCEEEECCCHHH VRLMQVPDLVDRADLKFAPFTPTLPANLQKKSKSSLFDVIRKGDVLLHHPYQSFQPVIDF HHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH LTQAATDPHVVAIKMTVYRTGTDSVLMESLIAAARAGKQVTVVVELMARFDEEANIGWAS HHHCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHH RLEDAGAHVVYGVIGYKVHAKMLMVVRREAHGLHRYVHLGTGNYHPRTARLYTDFGLLTC HHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEECCCEEEE NEEIASDVNDIFIQLTGLGRAGSLKRLFQSPFTLHSMIMEAIQRETEHAQAGKPAQIIAK CHHHHCCHHHEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH MNSLLEPQVIHALYRASQAGVKIQLIVRGVCALRPGVPGLSDNITVRSIVGRFLEHPRVF HHHHCCHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEE YFYNDHKEDLLMSSADWMGRNFFRRIETCAPILDNKLKRRIIKEALRLYLEDNVNSWEML EEECCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC PDGGYKRRTSRGKPHCAQRELLASYTGNPEAE CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA