| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498763
Identifier: 34498763
GI number: 34498763
Start: 3601918
End: 3602841
Strand: Direct
Name: 34498763
Synonym: CV_3308
Alternate gene names: NA
Gene position: 3601918-3602841 (Clockwise)
Preceding gene: 34498761
Following gene: 34498764
Centisome position: 75.81
GC content: 64.07
Gene sequence:
>924_bases ATGGATATCCTCCAGTGTCGAATGCGCGCGACGCGCCGCGCCCGGACTATCGGGCGGGCATGGCCTCACGCTAAATTCAA ATTGCATAAAATATTTCTCTTTTCAATTCAGTTACAGCAGAATTCAGATTACAAGCACAAGAACCATGGAGAGATCATGA CTTCGGCACTCGCCGCCCACCACCCGCAAGCCCCCTCCCATCCCGAACCGCAACTGGAGCCGATCTGCCGCCGCCTGGCG CTGCAGGACTTCTGCCTGCTGCCGGCGGAGCAAAGCCGTTCCCTGATGCAACGCTTCCCGGGCGCATTGGCTGACTGGAC CGCCTTTCAGGACAGTTGGAACCATCTGCAGCAAGACAAGTTCATGGCGGACGGCGGCCGCTACCGCAAACGGCTGCACG CGACGCTCAGCGCCGAGCCATCCTCCCGCGTCGCGCGCGCCGAGCCCCACCGCCCACACTACCAGAGCAAGCTGTACAAC CCGCTGAACGGCGGCGTGCCGCGCCATTTCGAGCCGATACGCAACGAAATCCTGCTCGGCCCCACCATGCAGGCGGCGCT GAGCCTGGGCTGCGCCATCTTCGGCCAGCTGTCGCCGTACACGCCGTGGCATATCGAAGCCCACCAGTTCCGCATCGAGG CACGCAACCGCGAACCCGGCTGGCCCACGCCGGAAGGCGTGCACCGCGACGGCGTGCATTTCCTGATGATGATGCTGGTC AAGCGTCACAATCTGGTGAACGGCGCCACCGAGCTGTTCGACCTGGAAAAACAGCCGCTGGCCTCGTTCACGCTGACCGA CCCGCTGGACATCGCGCTGGTCAACGACGAGCGCGTGCTGCACGGCGTCACCCCGGTCAGCCAGCTCGATCCCTCGCGCG ACGGCCACCGCGACGTGCTGCTGATCAGCTTCCGCCGCCGCTGA
Upstream 100 bases:
>100_bases ACCGCGATCACCAATAGGCCGAACAGCGCCGACCATGCCAGCCTGGGGCGGGCCAATATCATGCGTACCAGGATGAAACG GCGAATCATGCTCGTCATCA
Downstream 100 bases:
>100_bases CCCTCTCCGGCCATCCAGTTCCCGCCGGAGGCCAGGCGCGCCGGCGCGGCATCGGGACATGCGCCGGCCACGCCAAATGG TAATCTTCTTGGCCTATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MDILQCRMRATRRARTIGRAWPHAKFKLHKIFLFSIQLQQNSDYKHKNHGEIMTSALAAHHPQAPSHPEPQLEPICRRLA LQDFCLLPAEQSRSLMQRFPGALADWTAFQDSWNHLQQDKFMADGGRYRKRLHATLSAEPSSRVARAEPHRPHYQSKLYN PLNGGVPRHFEPIRNEILLGPTMQAALSLGCAIFGQLSPYTPWHIEAHQFRIEARNREPGWPTPEGVHRDGVHFLMMMLV KRHNLVNGATELFDLEKQPLASFTLTDPLDIALVNDERVLHGVTPVSQLDPSRDGHRDVLLISFRRR
Sequences:
>Translated_307_residues MDILQCRMRATRRARTIGRAWPHAKFKLHKIFLFSIQLQQNSDYKHKNHGEIMTSALAAHHPQAPSHPEPQLEPICRRLA LQDFCLLPAEQSRSLMQRFPGALADWTAFQDSWNHLQQDKFMADGGRYRKRLHATLSAEPSSRVARAEPHRPHYQSKLYN PLNGGVPRHFEPIRNEILLGPTMQAALSLGCAIFGQLSPYTPWHIEAHQFRIEARNREPGWPTPEGVHRDGVHFLMMMLV KRHNLVNGATELFDLEKQPLASFTLTDPLDIALVNDERVLHGVTPVSQLDPSRDGHRDVLLISFRRR >Mature_307_residues MDILQCRMRATRRARTIGRAWPHAKFKLHKIFLFSIQLQQNSDYKHKNHGEIMTSALAAHHPQAPSHPEPQLEPICRRLA LQDFCLLPAEQSRSLMQRFPGALADWTAFQDSWNHLQQDKFMADGGRYRKRLHATLSAEPSSRVARAEPHRPHYQSKLYN PLNGGVPRHFEPIRNEILLGPTMQAALSLGCAIFGQLSPYTPWHIEAHQFRIEARNREPGWPTPEGVHRDGVHFLMMMLV KRHNLVNGATELFDLEKQPLASFTLTDPLDIALVNDERVLHGVTPVSQLDPSRDGHRDVLLISFRRR
Specific function: Unknown
COG id: COG4340
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35254; Mature: 35254
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILQCRMRATRRARTIGRAWPHAKFKLHKIFLFSIQLQQNSDYKHKNHGEIMTSALAAH CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHC HPQAPSHPEPQLEPICRRLALQDFCLLPAEQSRSLMQRFPGALADWTAFQDSWNHLQQDK CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FMADGGRYRKRLHATLSAEPSSRVARAEPHRPHYQSKLYNPLNGGVPRHFEPIRNEILLG HHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHEECC PTMQAALSLGCAIFGQLSPYTPWHIEAHQFRIEARNREPGWPTPEGVHRDGVHFLMMMLV CHHHHHHHHHHHHHCCCCCCCCCEEEHEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH KRHNLVNGATELFDLEKQPLASFTLTDPLDIALVNDERVLHGVTPVSQLDPSRDGHRDVL HHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCHHEECCCCHHHCCCCCCCCCEEE LISFRRR EEEECCC >Mature Secondary Structure MDILQCRMRATRRARTIGRAWPHAKFKLHKIFLFSIQLQQNSDYKHKNHGEIMTSALAAH CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHC HPQAPSHPEPQLEPICRRLALQDFCLLPAEQSRSLMQRFPGALADWTAFQDSWNHLQQDK CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FMADGGRYRKRLHATLSAEPSSRVARAEPHRPHYQSKLYNPLNGGVPRHFEPIRNEILLG HHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHEECC PTMQAALSLGCAIFGQLSPYTPWHIEAHQFRIEARNREPGWPTPEGVHRDGVHFLMMMLV CHHHHHHHHHHHHHCCCCCCCCCEEEHEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH KRHNLVNGATELFDLEKQPLASFTLTDPLDIALVNDERVLHGVTPVSQLDPSRDGHRDVL HHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCHHEECCCCHHHCCCCCCCCCEEE LISFRRR EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA