| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498752
Identifier: 34498752
GI number: 34498752
Start: 3588587
End: 3589033
Strand: Reverse
Name: 34498752
Synonym: CV_3297
Alternate gene names: NA
Gene position: 3589033-3588587 (Counterclockwise)
Preceding gene: 34498753
Following gene: 34498751
Centisome position: 75.54
GC content: 71.59
Gene sequence:
>447_bases ATGAGCGGTTTGCTGACGGGCGGCCTGGCCGCGCTGCTGCTGGTTTCCGGCCTGGCCTGGGCGGACATCGGCGATTCCGC GGCATCGGCGCCCCGCGTCCGGCTGGAGTGCCTGCCCGACGGCGACGGCGCCGACTGGCATGGCTGGCTTTCCGCCCGGC TGGCGCTGCGCGGCCTGGAAGAGGGGCCGCCGCCGGGCTGGCGCCTGTGTTTCGCCGAGGAGCAGCGTCAGCAGTGGGTG GACCAGCCTGTGGATTGGCGCTATGACGGTTACTGGCGTCAGCCGCCGTACCGGCTTGAGCAGTGGATCGAGTTGAGCCT GACGGTGAAGGGCGAAGACGGAACCGTATTGTGGAGCGGCCGCGAGCGGCTGGGCGACGGCGACAACCGGCGCGCCAGGT TGGAGCGGGCGGCGCGCAGGCTGGTGGACAGGATGCCGCTGCCGTAA
Upstream 100 bases:
>100_bases CTTCCTGCTTCCGTCTTTTTAAAAGTGCCGCGACCGCCATCGCGGCACTTTGTCGTTTGGAGGCAGTCTGTTCGGGTATC GGATAGAAAAGGAGAGGGCG
Downstream 100 bases:
>100_bases TTGCTCCTTGTTATGACTGTTGATTATTTGCTTGTAAGCTATTGGTGTTTTCCCGTATTGTGACCGTTGCTTCCTACGGT AGTATCGATGGCCTCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSGLLTGGLAALLLVSGLAWADIGDSAASAPRVRLECLPDGDGADWHGWLSARLALRGLEEGPPPGWRLCFAEEQRQQWV DQPVDWRYDGYWRQPPYRLEQWIELSLTVKGEDGTVLWSGRERLGDGDNRRARLERAARRLVDRMPLP
Sequences:
>Translated_148_residues MSGLLTGGLAALLLVSGLAWADIGDSAASAPRVRLECLPDGDGADWHGWLSARLALRGLEEGPPPGWRLCFAEEQRQQWV DQPVDWRYDGYWRQPPYRLEQWIELSLTVKGEDGTVLWSGRERLGDGDNRRARLERAARRLVDRMPLP >Mature_147_residues SGLLTGGLAALLLVSGLAWADIGDSAASAPRVRLECLPDGDGADWHGWLSARLALRGLEEGPPPGWRLCFAEEQRQQWVD QPVDWRYDGYWRQPPYRLEQWIELSLTVKGEDGTVLWSGRERLGDGDNRRARLERAARRLVDRMPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16690; Mature: 16559
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLLTGGLAALLLVSGLAWADIGDSAASAPRVRLECLPDGDGADWHGWLSARLALRGLE CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCC EGPPPGWRLCFAEEQRQQWVDQPVDWRYDGYWRQPPYRLEQWIELSLTVKGEDGTVLWSG CCCCCCEEEEECHHHHHHHHCCCCCCCCCCEECCCCHHHHHEEEEEEEEECCCCEEEECC RERLGDGDNRRARLERAARRLVDRMPLP CHHCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SGLLTGGLAALLLVSGLAWADIGDSAASAPRVRLECLPDGDGADWHGWLSARLALRGLE CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCC EGPPPGWRLCFAEEQRQQWVDQPVDWRYDGYWRQPPYRLEQWIELSLTVKGEDGTVLWSG CCCCCCEEEEECHHHHHHHHCCCCCCCCCCEECCCCHHHHHEEEEEEEEECCCCEEEECC RERLGDGDNRRARLERAARRLVDRMPLP CHHCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA