| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34498718
Identifier: 34498718
GI number: 34498718
Start: 3550551
End: 3551027
Strand: Direct
Name: 34498718
Synonym: CV_3263
Alternate gene names: NA
Gene position: 3550551-3551027 (Clockwise)
Preceding gene: 34498717
Following gene: 34498719
Centisome position: 74.73
GC content: 67.3
Gene sequence:
>477_bases ATGTCAACGGAACACCCTAGCGAGATGGTGGCCGCCACGCAGGAATCATTCCCGCTGGCATCCCGGGGCGTCACGGTCAG CCTGCCCGTAGCGGCGCCCACCGGCCCGGCGCTGAAAGCCCAGGCCGGCGGCAAACCTCGCCAAGCCTATCTCCGGGTCG AACGGATCACCGGGAAAGGCATGCCGCCGGGCTACGAGATCTATCTGCATCCGCCGGGCGAAAACCAGCCCAGCCGCCGG GAAGAGCTGTGCGCCGGCGTGCTGCCGCTGTTCGGCTTGGACAAGGCGTCCCGGCAAGGCGCTGGGCATGCGGGCACCGG CCTGCATTACGTGTTCGACGTCACCGAGCTGATGGAAAGGCTGGAACGGGAACCCGGCTGGGATCCCCAGGACCTGCGCG TCACCTTCGTGCCCAGACGGCAGCCCAGGCAAGATGCCGAAGTCCGGGTGGGACGGGTCAGCCTGTATTACGCATAG
Upstream 100 bases:
>100_bases GATACCGCCAACGGCCCTTGGCACTACCAGTACGACAATCTCGCCAATCCGCTGGGCAACGTCCACTAGCCGCGCCCGGC CATCACGGGAGGACCCACTC
Downstream 100 bases:
>100_bases CCGCGGATCGAGACGATGCGCCCGCCATCCATCCGCGGCTCCCGCCTCGCCGCGGCGCGAGCATGGCCGGCCGTTCTGGA ACAAGCGTCGGGCTGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase; Tyrosinase Domain Protein
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSTEHPSEMVAATQESFPLASRGVTVSLPVAAPTGPALKAQAGGKPRQAYLRVERITGKGMPPGYEIYLHPPGENQPSRR EELCAGVLPLFGLDKASRQGAGHAGTGLHYVFDVTELMERLEREPGWDPQDLRVTFVPRRQPRQDAEVRVGRVSLYYA
Sequences:
>Translated_158_residues MSTEHPSEMVAATQESFPLASRGVTVSLPVAAPTGPALKAQAGGKPRQAYLRVERITGKGMPPGYEIYLHPPGENQPSRR EELCAGVLPLFGLDKASRQGAGHAGTGLHYVFDVTELMERLEREPGWDPQDLRVTFVPRRQPRQDAEVRVGRVSLYYA >Mature_157_residues STEHPSEMVAATQESFPLASRGVTVSLPVAAPTGPALKAQAGGKPRQAYLRVERITGKGMPPGYEIYLHPPGENQPSRRE ELCAGVLPLFGLDKASRQGAGHAGTGLHYVFDVTELMERLEREPGWDPQDLRVTFVPRRQPRQDAEVRVGRVSLYYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17335; Mature: 17204
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEHPSEMVAATQESFPLASRGVTVSLPVAAPTGPALKAQAGGKPRQAYLRVERITGKG CCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCHHHEEEEEEECCCC MPPGYEIYLHPPGENQPSRREELCAGVLPLFGLDKASRQGAGHAGTGLHYVFDVTELMER CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHEEEHHHHHHH LEREPGWDPQDLRVTFVPRRQPRQDAEVRVGRVSLYYA HHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure STEHPSEMVAATQESFPLASRGVTVSLPVAAPTGPALKAQAGGKPRQAYLRVERITGKG CCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCHHHEEEEEEECCCC MPPGYEIYLHPPGENQPSRREELCAGVLPLFGLDKASRQGAGHAGTGLHYVFDVTELMER CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHEEEHHHHHHH LEREPGWDPQDLRVTFVPRRQPRQDAEVRVGRVSLYYA HHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA