| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is rpfC [H]
Identifier: 34498703
GI number: 34498703
Start: 3528413
End: 3532855
Strand: Direct
Name: rpfC [H]
Synonym: CV_3248
Alternate gene names: 34498703
Gene position: 3528413-3532855 (Clockwise)
Preceding gene: 34498702
Following gene: 34498706
Centisome position: 74.27
GC content: 67.48
Gene sequence:
>4443_bases CTGCTGCAATCGATACTGGACAATTCCTCGGCGGCGATCTTCGTCAAGGATCTGGACGGCCGCTACCTGCTGGCCAACCT GGGCTCTCAAACCCTGCTTGGGCTGCCGCGGGTGCCCGAAGCCGGGCTGCGCGACCACGACCTGTTTCCCGAGGCGTTCG CGGACCGGCTGGCGGCAGCCGACCGCCAGGTGCTGTCCAGCGGCCGCCCCCAGGAGTTCGAGGTGCTGATGGAACACCTC GACCCGCCCCGCACCTACCTGTCGCTCAAGTTCCCGCTGCGCGCGCCCTCCGGCGAGATCTACGCCATCGGCGGCATCGC CACCGACATCAGCGAGCGCAAGCGGCTGGAAAGCCAGATCAGCGAGCATGACGAACTACTGCGCGACATGAGCGCCATCG CCCGCATCGGCGGCTGGTGGTTCGACCCGATCAGCGGCCAGGGCAATTGGACCGCCGAGGTGGCGCGCATCCACGACCTG CCGGAAGCGGCGCCGGTCAATGTGGAAGACGGCCTGTCCTACTACAGCGGAGAGTCGCGCGAGCGGATAGAGGCGGCGGT CCAGGCCGCCATCCGCGACGGCAAGCCCTACGACCTGGAGCTGGAACTGATTTCCGCCACTGGCCGGCGCAAATGGGTGC GCACGCTGGGCCGCCCGCAGGTCCGCGACGGCCGGGTGGTGAAGGTGCGCGGCGCGATGCAGGACATCTCCGACCGCAAG CAGGCGGAACTGGCGCTAAGGGAAAGCGAGGAACTGCTGCACCTGTTCGTCGAGCATGCGCCGGCCGCGCTGGCGATGTT CGACCGCCAGATGCGCTACCTGGCGGTCAGCCGCCGCTGGCTGCGCGATTACGGCCTGGAAGGGCGGGACATCCTGGGCC AGTCGCACTACGCCGTCTTCCCGGAAATCCCGCCCGCCTGGCGCGCGGTGCACCGGCGCGGCCTGGACGGCGAAGTGGTC CGCGAGGAAGAGGCGCTGTTCATCCGCGCCAACGGCGACCAGCAATGGCAAAAATGGGAGGTGCGGCCCTGGCGGCGGCG CGACGGCACCATCGGCGGCATCCTGATCTACACCGAAGACATCACCGCGCGCAAGCAGGCGGAAAAAGACAAGCACTGGC TGGCCGAGGCGCTGAACCAGGCCGCCCAACCCATCCTGATGGTCGATGCCGAAGACCGCGTCACCTACGCCAATCCCGCC TATACCGCGCTGATGGGATATTCGCGGGACGAACTGATCGGCATCCAGGCCAACCAGCTCGCCCCGGGCGCCGACCAGGC CGAGCGGGACATCATCAAGCAGAAGATATTGACCGAGGGCAGCTGGTCCGGAGAACTGGCGCGGCTGGACAGCCAGGGCA GATCGATACCGGTCTATGCCTCCGCCGCCGCACTGCATGACCAGGCCGGCACGCTGGAAGGCTATGTCGTCACTTACGCC GATCTGCGCCCGCTGCAAGAAAAGAGCCTGGCATTGGCGGAAAGCCAGGCCCGCTACCAGACTGTGCTGGACCATGCCGC CGACGCGGTATTCATCGCCGATCCCGCCGGCCGCTATCTGTACGCCAACCGCCAGGCGAGCCAGCTGTTGGGTTACAGCC AGCAGGAGCTATTGAAGTTGTCGATCGCCGACATCACGCCGCCGGAGGACGCCGGCAACGCCGCCCGCGCCTTCCAGTCT CTGCTGGCGGGCAGCCACGTCACCGCCGAGCTGCTGCTCAAGCGCAAGGACGGAGGCCAGGTGCCGGTGGAAATCAACGC GATCCAGCTGCCGGACGGCACCTTCTACGGCGCCTGCCGCGACATCGCCGAGCGCAAGCGGACCGAGGAAGAGATCCGCA AGCTGTCGCTGGTGGTGGAGCAGAGTCCGGAAAGCATCATGATCACCGACAGGCAGGCGCGGATCGAGTATGTGAACGAT GCCTTCGTCCGCAAGACCGGCTACAGCCCGGACGAAGTGATAGGCCGCGACCCCAGCCTGCTTGCCTCCGGCAAGACGCC CAAGTCCACCTACGAGGACCTGTGGCGGCAGCTGCAGGATGGACAATCGTGGAAGGGAGAATTCCACAACCGCTGCAAGG ATGGCCGCGAACTGGTGGAACTCGCCCGCATCGCGCCCATCCGCGAGAAGGATGGGCGCATCAGCCACTACCTGGCGCTG CAGGAGGACATCACCGAGAAGAAGCGGCTGGGACTGGAGCTGGACAATTACCGCCACCGCCTTGAAGAACTGGTCGAGGC GCGCACCGCTGAGGTCCGCGAAGCCCATGCCCGGCTGCAGATCACCCAGTTCGCGATGGACAGCGTGGGCATCGGCATAC AGTGGATCGATCCCGATAGCGGCCGCTTCGTCTACGCCAATCGGCACACGGCCGAGCTGCTGGGATACAGCGAGCAGGAA ATGCTGACCCTGACGGTATCCGACATCGATCCCGCCTTCCCGCTTCCCGCCTTCCACGCCACGATGGCGCGGCTGCGCCA ATCGCGCTATACCCAATTCCAAAGCCAGATAGAGACCCGGGGCGGCGTTCCCATCCCGGTGGAAATCACGCTGTACTACA TGGAAGGCGACGCCGATGCCCCTGCCCGCGTCATCGCCTTCCTGACCGACATCAGCCGCCGCAAGGAAACCGAGCAAACG CTGGTCCAGGCCAAGGAGGCGGCGGAAAAGGCCAACCTGGCCAAGACAGCCTTCGTGGCCAACATGAGCCACGAGATCCG CACGCCGATGAACGCCATCCTCGGCATGGTCTACCTGCTGAGCCAGGGCCGCCTGTCCGCTCAGCAGCAGCACCAGCTGG ACACCATTGACCGCTCGGCGCGCCACCTGCTGAACCTGATCAACGACATTCTCGACCTGTCCAAGGCCGACGTCGGCAAG CTGCAACTCGCGCTCAGCGATTTCGACCTGGCACGCCTGCCCGCCGACGTGATGGGACTGGTGGCCGACCAGGCCAAGGC CAAAGGGCTGCAACTGTCGCTGCAAGCGGATGCCGGGCCGCTGCCGGTCCGCGGCGACGCCACCCGGCTGACCCAATGCC TGCTCAATCTGCTCAGCAATGCGGTCAAGTTCACCGAACGCGGGCGGATAGCGATCTCCCTGAGCATTGACGGCGAGGAC GAGTACGGCGTCCTTGCCCGATTCGAAGTGCGCGACACCGGCATAGGCATTCCCGCCGAAGTGCAGCCCCGGCTGTTCGG CGCCTTCGAACAGGCGGACGCCTCCACCACCCGCCGCTACGGCGGCACCGGCCTGGGACTGGCCATCACCAAGCGGCTGG CGGAGCTGATGGGCGGCGCGGTGGGCGTGGAAAGCGCGCCCGGCCAGGGCAGCCTGTTCTGGTTCACCGCCCGCGTGGCC AGAAGCGGCCAAGCCGCCGCCGACCAGTATCCGCAGCAGACGGGCGTAGCGCAGCCCCGCACGCGCTGGGACGGCCTGCG TGTGTTGCTGGTCGAGGATGACGCCATCAACCGCGAAGTGGCCCAGGCATTGCTGCAGGATGTCGGGCTCGAAGCCGACA TGGCGGAAAACGGCAAGATCGCGGTGGAACGGGTCCAGGCGGCACCCGCCCGCTACGCGCTGATCCTGATGGACGTGCAG ATGCCGGAAATGGACGGGCTGGAAGCCACCCGCCGCATACGCGCGCTGGATGCCGGGGAGAACATTCCCATCATGGCGAT GACGGCCAATGCCTTCGCCGAAGACCGGTCGGCCTGCCGCGAGGCGGGGATGAACGACTTCGTCGCCAAGCCGGTCGATC CGGACCAGCTGTTCGCCGCGCTGCGGCGCTGGCTGCCGGCGGGACGAACGGAGGCGCCCGCTCCCCCCGCCCCGCCAGTC AGCGAGCTGCAAGGGATGCTGGGCAATATACCCGGCCTGGACCTGCGACAAGGCCTGGCCTGTCTGGGCGGCGACCTGGA ACGCTACCGCGCCATGCTGACGCGCTTCCTGGCTGGCCACGGCGACGACGCGGCCAAACTGCGCGCGCTGCGCGACCAAG GCCGGGAACAGGATGCGATGCGGCTGGCCCACTCCCTGAAAGGCAGCAGCGGCACGCTGGGGCTGACCGAGCTGCAAGCC TCCGCCGCCGCGCTGGAGGCCGAGCTGAACCGCGACCATCCCGACGCCGCCGGCCACATCGCCCGGCTGGAGGCCATTCT CGGCCAGCTTGCCCGCTGCCTCGCCTCGACGACGACCGGAAACCCCGCGGCGCCCATGCCCCCGGTCGACGCGGCGGCCG TGCTGAAACAGCTGGAAAACGCGCTGCGGGCCGGAGACTTCGCCGCCTACAGCCTGTATATCGGCAACCGGGAAGCGCTG AACGGCCATTGCGGCGCCGACGCGCTGCTCGAACTGGAGCGGCGCATGCGGGGGTTCGACTTCGCAGAGGCGCTGGCCAT CGTCCAGTCCATCGAAGGCGGCGGACAGCCGCCGGGCGGCTGA
Upstream 100 bases:
>100_bases CCCTTTCGAGGACGAGGACGGCAGGCGGTCATTCAGCGTGGTGATACGCGACCTGTCCGCCGAGCACGAAGTGCAGTCCG AACTGGCGCGTCAGCACCAA
Downstream 100 bases:
>100_bases AACCGGGATCTCAGCCGCCCGGCGCCAGCACGCTGGCCGCGATGGCCGCATCCTGGGCAGCGATGCCGGTCAGATCGGCC AGCGTGATCTGCTCGTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1480; Mature: 1480
Protein sequence:
>1480_residues MLQSILDNSSAAIFVKDLDGRYLLANLGSQTLLGLPRVPEAGLRDHDLFPEAFADRLAAADRQVLSSGRPQEFEVLMEHL DPPRTYLSLKFPLRAPSGEIYAIGGIATDISERKRLESQISEHDELLRDMSAIARIGGWWFDPISGQGNWTAEVARIHDL PEAAPVNVEDGLSYYSGESRERIEAAVQAAIRDGKPYDLELELISATGRRKWVRTLGRPQVRDGRVVKVRGAMQDISDRK QAELALRESEELLHLFVEHAPAALAMFDRQMRYLAVSRRWLRDYGLEGRDILGQSHYAVFPEIPPAWRAVHRRGLDGEVV REEEALFIRANGDQQWQKWEVRPWRRRDGTIGGILIYTEDITARKQAEKDKHWLAEALNQAAQPILMVDAEDRVTYANPA YTALMGYSRDELIGIQANQLAPGADQAERDIIKQKILTEGSWSGELARLDSQGRSIPVYASAAALHDQAGTLEGYVVTYA DLRPLQEKSLALAESQARYQTVLDHAADAVFIADPAGRYLYANRQASQLLGYSQQELLKLSIADITPPEDAGNAARAFQS LLAGSHVTAELLLKRKDGGQVPVEINAIQLPDGTFYGACRDIAERKRTEEEIRKLSLVVEQSPESIMITDRQARIEYVND AFVRKTGYSPDEVIGRDPSLLASGKTPKSTYEDLWRQLQDGQSWKGEFHNRCKDGRELVELARIAPIREKDGRISHYLAL QEDITEKKRLGLELDNYRHRLEELVEARTAEVREAHARLQITQFAMDSVGIGIQWIDPDSGRFVYANRHTAELLGYSEQE MLTLTVSDIDPAFPLPAFHATMARLRQSRYTQFQSQIETRGGVPIPVEITLYYMEGDADAPARVIAFLTDISRRKETEQT LVQAKEAAEKANLAKTAFVANMSHEIRTPMNAILGMVYLLSQGRLSAQQQHQLDTIDRSARHLLNLINDILDLSKADVGK LQLALSDFDLARLPADVMGLVADQAKAKGLQLSLQADAGPLPVRGDATRLTQCLLNLLSNAVKFTERGRIAISLSIDGED EYGVLARFEVRDTGIGIPAEVQPRLFGAFEQADASTTRRYGGTGLGLAITKRLAELMGGAVGVESAPGQGSLFWFTARVA RSGQAAADQYPQQTGVAQPRTRWDGLRVLLVEDDAINREVAQALLQDVGLEADMAENGKIAVERVQAAPARYALILMDVQ MPEMDGLEATRRIRALDAGENIPIMAMTANAFAEDRSACREAGMNDFVAKPVDPDQLFAALRRWLPAGRTEAPAPPAPPV SELQGMLGNIPGLDLRQGLACLGGDLERYRAMLTRFLAGHGDDAAKLRALRDQGREQDAMRLAHSLKGSSGTLGLTELQA SAAALEAELNRDHPDAAGHIARLEAILGQLARCLASTTTGNPAAPMPPVDAAAVLKQLENALRAGDFAAYSLYIGNREAL NGHCGADALLELERRMRGFDFAEALAIVQSIEGGGQPPGG
Sequences:
>Translated_1480_residues MLQSILDNSSAAIFVKDLDGRYLLANLGSQTLLGLPRVPEAGLRDHDLFPEAFADRLAAADRQVLSSGRPQEFEVLMEHL DPPRTYLSLKFPLRAPSGEIYAIGGIATDISERKRLESQISEHDELLRDMSAIARIGGWWFDPISGQGNWTAEVARIHDL PEAAPVNVEDGLSYYSGESRERIEAAVQAAIRDGKPYDLELELISATGRRKWVRTLGRPQVRDGRVVKVRGAMQDISDRK QAELALRESEELLHLFVEHAPAALAMFDRQMRYLAVSRRWLRDYGLEGRDILGQSHYAVFPEIPPAWRAVHRRGLDGEVV REEEALFIRANGDQQWQKWEVRPWRRRDGTIGGILIYTEDITARKQAEKDKHWLAEALNQAAQPILMVDAEDRVTYANPA YTALMGYSRDELIGIQANQLAPGADQAERDIIKQKILTEGSWSGELARLDSQGRSIPVYASAAALHDQAGTLEGYVVTYA DLRPLQEKSLALAESQARYQTVLDHAADAVFIADPAGRYLYANRQASQLLGYSQQELLKLSIADITPPEDAGNAARAFQS LLAGSHVTAELLLKRKDGGQVPVEINAIQLPDGTFYGACRDIAERKRTEEEIRKLSLVVEQSPESIMITDRQARIEYVND AFVRKTGYSPDEVIGRDPSLLASGKTPKSTYEDLWRQLQDGQSWKGEFHNRCKDGRELVELARIAPIREKDGRISHYLAL QEDITEKKRLGLELDNYRHRLEELVEARTAEVREAHARLQITQFAMDSVGIGIQWIDPDSGRFVYANRHTAELLGYSEQE MLTLTVSDIDPAFPLPAFHATMARLRQSRYTQFQSQIETRGGVPIPVEITLYYMEGDADAPARVIAFLTDISRRKETEQT LVQAKEAAEKANLAKTAFVANMSHEIRTPMNAILGMVYLLSQGRLSAQQQHQLDTIDRSARHLLNLINDILDLSKADVGK LQLALSDFDLARLPADVMGLVADQAKAKGLQLSLQADAGPLPVRGDATRLTQCLLNLLSNAVKFTERGRIAISLSIDGED EYGVLARFEVRDTGIGIPAEVQPRLFGAFEQADASTTRRYGGTGLGLAITKRLAELMGGAVGVESAPGQGSLFWFTARVA RSGQAAADQYPQQTGVAQPRTRWDGLRVLLVEDDAINREVAQALLQDVGLEADMAENGKIAVERVQAAPARYALILMDVQ MPEMDGLEATRRIRALDAGENIPIMAMTANAFAEDRSACREAGMNDFVAKPVDPDQLFAALRRWLPAGRTEAPAPPAPPV SELQGMLGNIPGLDLRQGLACLGGDLERYRAMLTRFLAGHGDDAAKLRALRDQGREQDAMRLAHSLKGSSGTLGLTELQA SAAALEAELNRDHPDAAGHIARLEAILGQLARCLASTTTGNPAAPMPPVDAAAVLKQLENALRAGDFAAYSLYIGNREAL NGHCGADALLELERRMRGFDFAEALAIVQSIEGGGQPPGG >Mature_1480_residues MLQSILDNSSAAIFVKDLDGRYLLANLGSQTLLGLPRVPEAGLRDHDLFPEAFADRLAAADRQVLSSGRPQEFEVLMEHL DPPRTYLSLKFPLRAPSGEIYAIGGIATDISERKRLESQISEHDELLRDMSAIARIGGWWFDPISGQGNWTAEVARIHDL PEAAPVNVEDGLSYYSGESRERIEAAVQAAIRDGKPYDLELELISATGRRKWVRTLGRPQVRDGRVVKVRGAMQDISDRK QAELALRESEELLHLFVEHAPAALAMFDRQMRYLAVSRRWLRDYGLEGRDILGQSHYAVFPEIPPAWRAVHRRGLDGEVV REEEALFIRANGDQQWQKWEVRPWRRRDGTIGGILIYTEDITARKQAEKDKHWLAEALNQAAQPILMVDAEDRVTYANPA YTALMGYSRDELIGIQANQLAPGADQAERDIIKQKILTEGSWSGELARLDSQGRSIPVYASAAALHDQAGTLEGYVVTYA DLRPLQEKSLALAESQARYQTVLDHAADAVFIADPAGRYLYANRQASQLLGYSQQELLKLSIADITPPEDAGNAARAFQS LLAGSHVTAELLLKRKDGGQVPVEINAIQLPDGTFYGACRDIAERKRTEEEIRKLSLVVEQSPESIMITDRQARIEYVND AFVRKTGYSPDEVIGRDPSLLASGKTPKSTYEDLWRQLQDGQSWKGEFHNRCKDGRELVELARIAPIREKDGRISHYLAL QEDITEKKRLGLELDNYRHRLEELVEARTAEVREAHARLQITQFAMDSVGIGIQWIDPDSGRFVYANRHTAELLGYSEQE MLTLTVSDIDPAFPLPAFHATMARLRQSRYTQFQSQIETRGGVPIPVEITLYYMEGDADAPARVIAFLTDISRRKETEQT LVQAKEAAEKANLAKTAFVANMSHEIRTPMNAILGMVYLLSQGRLSAQQQHQLDTIDRSARHLLNLINDILDLSKADVGK LQLALSDFDLARLPADVMGLVADQAKAKGLQLSLQADAGPLPVRGDATRLTQCLLNLLSNAVKFTERGRIAISLSIDGED EYGVLARFEVRDTGIGIPAEVQPRLFGAFEQADASTTRRYGGTGLGLAITKRLAELMGGAVGVESAPGQGSLFWFTARVA RSGQAAADQYPQQTGVAQPRTRWDGLRVLLVEDDAINREVAQALLQDVGLEADMAENGKIAVERVQAAPARYALILMDVQ MPEMDGLEATRRIRALDAGENIPIMAMTANAFAEDRSACREAGMNDFVAKPVDPDQLFAALRRWLPAGRTEAPAPPAPPV SELQGMLGNIPGLDLRQGLACLGGDLERYRAMLTRFLAGHGDDAAKLRALRDQGREQDAMRLAHSLKGSSGTLGLTELQA SAAALEAELNRDHPDAAGHIARLEAILGQLARCLASTTTGNPAAPMPPVDAAAVLKQLENALRAGDFAAYSLYIGNREAL NGHCGADALLELERRMRGFDFAEALAIVQSIEGGGQPPGG
Specific function: Involved in the positive regulation of synthesis of extracellular enzymes and polysaccharide, and hence in pathogenicity. Can restore function to the non-pathogenic mutant 8237 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=586, Percent_Identity=31.740614334471, Blast_Score=246, Evalue=9e-66, Organism=Escherichia coli, GI1789149, Length=401, Percent_Identity=34.9127182044888, Blast_Score=204, Evalue=5e-53, Organism=Escherichia coli, GI1788713, Length=503, Percent_Identity=31.610337972167, Blast_Score=198, Evalue=2e-51, Organism=Escherichia coli, GI145693157, Length=276, Percent_Identity=38.0434782608696, Blast_Score=172, Evalue=2e-43, Organism=Escherichia coli, GI87081816, Length=336, Percent_Identity=35.7142857142857, Blast_Score=166, Evalue=1e-41, Organism=Escherichia coli, GI1790436, Length=264, Percent_Identity=29.5454545454545, Blast_Score=95, Evalue=3e-20, Organism=Escherichia coli, GI1786600, Length=243, Percent_Identity=29.6296296296296, Blast_Score=91, Evalue=5e-19, Organism=Escherichia coli, GI1788549, Length=250, Percent_Identity=28, Blast_Score=88, Evalue=4e-18, Organism=Escherichia coli, GI1790346, Length=229, Percent_Identity=27.9475982532751, Blast_Score=86, Evalue=2e-17, Organism=Escherichia coli, GI1786783, Length=232, Percent_Identity=30.1724137931034, Blast_Score=80, Evalue=9e-16, Organism=Escherichia coli, GI1786912, Length=246, Percent_Identity=26.4227642276423, Blast_Score=78, Evalue=3e-15, Organism=Escherichia coli, GI1788393, Length=249, Percent_Identity=26.9076305220884, Blast_Score=78, Evalue=4e-15, Organism=Escherichia coli, GI1790437, Length=150, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=4e-15, Organism=Escherichia coli, GI87082128, Length=220, Percent_Identity=28.1818181818182, Blast_Score=72, Evalue=4e-13, Organism=Escherichia coli, GI1788279, Length=247, Percent_Identity=26.7206477732794, Blast_Score=67, Evalue=8e-12, Organism=Escherichia coli, GI1787894, Length=228, Percent_Identity=29.3859649122807, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1789453, Length=105, Percent_Identity=30.4761904761905, Blast_Score=65, Evalue=3e-11, Organism=Escherichia coli, GI1790551, Length=209, Percent_Identity=30.622009569378, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1788191, Length=107, Percent_Identity=35.5140186915888, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322000, Length=121, Percent_Identity=38.0165289256198, Blast_Score=87, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6322044, Length=154, Percent_Identity=35.7142857142857, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 162965; Mature: 162965
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS50894 HPT ; PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQSILDNSSAAIFVKDLDGRYLLANLGSQTLLGLPRVPEAGLRDHDLFPEAFADRLAAA CCHHHHCCCCCEEEEEECCCCEEEECCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH DRQVLSSGRPQEFEVLMEHLDPPRTYLSLKFPLRAPSGEIYAIGGIATDISERKRLESQI HHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHH SEHDELLRDMSAIARIGGWWFDPISGQGNWTAEVARIHDLPEAAPVNVEDGLSYYSGESR HHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCHHHCCCHH ERIEAAVQAAIRDGKPYDLELELISATGRRKWVRTLGRPQVRDGRVVKVRGAMQDISDRK HHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHH QAELALRESEELLHLFVEHAPAALAMFDRQMRYLAVSRRWLRDYGLEGRDILGQSHYAVF HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEC PEIPPAWRAVHRRGLDGEVVREEEALFIRANGDQQWQKWEVRPWRRRDGTIGGILIYTED CCCCHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCHHCCCCCHHCCCCCEEEEEEEECC ITARKQAEKDKHWLAEALNQAAQPILMVDAEDRVTYANPAYTALMGYSRDELIGIQANQL CHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHCCCCCCEEEEECCCC APGADQAERDIIKQKILTEGSWSGELARLDSQGRSIPVYASAAALHDQAGTLEGYVVTYA CCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEHHHHHHHCCCCCCCEEEEEE DLRPLQEKSLALAESQARYQTVLDHAADAVFIADPAGRYLYANRQASQLLGYSQQELLKL CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCHHHHHHCCCHHHHHHH SIADITPPEDAGNAARAFQSLLAGSHVTAELLLKRKDGGQVPVEINAIQLPDGTFYGACR HHHCCCCCCCCCHHHHHHHHHHCCCCCEEHHHEECCCCCCCCEEEEEEECCCCCHHHHHH DIAERKRTEEEIRKLSLVVEQSPESIMITDRQARIEYVNDAFVRKTGYSPDEVIGRDPSL HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHCCCCCCC LASGKTPKSTYEDLWRQLQDGQSWKGEFHNRCKDGRELVELARIAPIREKDGRISHYLAL EECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH QEDITEKKRLGLELDNYRHRLEELVEARTAEVREAHARLQITQFAMDSVGIGIQWIDPDS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC GRFVYANRHTAELLGYSEQEMLTLTVSDIDPAFPLPAFHATMARLRQSRYTQFQSQIETR CCEEEECCCHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GGVPIPVEITLYYMEGDADAPARVIAFLTDISRRKETEQTLVQAKEAAEKANLAKTAFVA CCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NMSHEIRTPMNAILGMVYLLSQGRLSAQQQHQLDTIDRSARHLLNLINDILDLSKADVGK HCHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LQLALSDFDLARLPADVMGLVADQAKAKGLQLSLQADAGPLPVRGDATRLTQCLLNLLSN EEEEECCCCHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH AVKFTERGRIAISLSIDGEDEYGVLARFEVRDTGIGIPAEVQPRLFGAFEQADASTTRRY HHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHC GGTGLGLAITKRLAELMGGAVGVESAPGQGSLFWFTARVARSGQAAADQYPQQTGVAQPR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHCCHHCCCCCCC TRWDGLRVLLVEDDAINREVAQALLQDVGLEADMAENGKIAVERVQAAPARYALILMDVQ CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCCEEEEEEEEEC MPEMDGLEATRRIRALDAGENIPIMAMTANAFAEDRSACREAGMNDFVAKPVDPDQLFAA CCCCCCHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH LRRWLPAGRTEAPAPPAPPVSELQGMLGNIPGLDLRQGLACLGGDLERYRAMLTRFLAGH HHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC GDDAAKLRALRDQGREQDAMRLAHSLKGSSGTLGLTELQASAAALEAELNRDHPDAAGHI CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH ARLEAILGQLARCLASTTTGNPAAPMPPVDAAAVLKQLENALRAGDFAAYSLYIGNREAL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC NGHCGADALLELERRMRGFDFAEALAIVQSIEGGGQPPGG CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLQSILDNSSAAIFVKDLDGRYLLANLGSQTLLGLPRVPEAGLRDHDLFPEAFADRLAAA CCHHHHCCCCCEEEEEECCCCEEEECCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH DRQVLSSGRPQEFEVLMEHLDPPRTYLSLKFPLRAPSGEIYAIGGIATDISERKRLESQI HHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHH SEHDELLRDMSAIARIGGWWFDPISGQGNWTAEVARIHDLPEAAPVNVEDGLSYYSGESR HHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCHHHCCCHH ERIEAAVQAAIRDGKPYDLELELISATGRRKWVRTLGRPQVRDGRVVKVRGAMQDISDRK HHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHH QAELALRESEELLHLFVEHAPAALAMFDRQMRYLAVSRRWLRDYGLEGRDILGQSHYAVF HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEC PEIPPAWRAVHRRGLDGEVVREEEALFIRANGDQQWQKWEVRPWRRRDGTIGGILIYTED CCCCHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCHHCCCCCHHCCCCCEEEEEEEECC ITARKQAEKDKHWLAEALNQAAQPILMVDAEDRVTYANPAYTALMGYSRDELIGIQANQL CHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHCCCCCCEEEEECCCC APGADQAERDIIKQKILTEGSWSGELARLDSQGRSIPVYASAAALHDQAGTLEGYVVTYA CCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEHHHHHHHCCCCCCCEEEEEE DLRPLQEKSLALAESQARYQTVLDHAADAVFIADPAGRYLYANRQASQLLGYSQQELLKL CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCHHHHHHCCCHHHHHHH SIADITPPEDAGNAARAFQSLLAGSHVTAELLLKRKDGGQVPVEINAIQLPDGTFYGACR HHHCCCCCCCCCHHHHHHHHHHCCCCCEEHHHEECCCCCCCCEEEEEEECCCCCHHHHHH DIAERKRTEEEIRKLSLVVEQSPESIMITDRQARIEYVNDAFVRKTGYSPDEVIGRDPSL HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHCCCCCCC LASGKTPKSTYEDLWRQLQDGQSWKGEFHNRCKDGRELVELARIAPIREKDGRISHYLAL EECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH QEDITEKKRLGLELDNYRHRLEELVEARTAEVREAHARLQITQFAMDSVGIGIQWIDPDS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC GRFVYANRHTAELLGYSEQEMLTLTVSDIDPAFPLPAFHATMARLRQSRYTQFQSQIETR CCEEEECCCHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GGVPIPVEITLYYMEGDADAPARVIAFLTDISRRKETEQTLVQAKEAAEKANLAKTAFVA CCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NMSHEIRTPMNAILGMVYLLSQGRLSAQQQHQLDTIDRSARHLLNLINDILDLSKADVGK HCHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LQLALSDFDLARLPADVMGLVADQAKAKGLQLSLQADAGPLPVRGDATRLTQCLLNLLSN EEEEECCCCHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH AVKFTERGRIAISLSIDGEDEYGVLARFEVRDTGIGIPAEVQPRLFGAFEQADASTTRRY HHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHC GGTGLGLAITKRLAELMGGAVGVESAPGQGSLFWFTARVARSGQAAADQYPQQTGVAQPR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHCCHHCCCCCCC TRWDGLRVLLVEDDAINREVAQALLQDVGLEADMAENGKIAVERVQAAPARYALILMDVQ CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCCEEEEEEEEEC MPEMDGLEATRRIRALDAGENIPIMAMTANAFAEDRSACREAGMNDFVAKPVDPDQLFAA CCCCCCHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH LRRWLPAGRTEAPAPPAPPVSELQGMLGNIPGLDLRQGLACLGGDLERYRAMLTRFLAGH HHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC GDDAAKLRALRDQGREQDAMRLAHSLKGSSGTLGLTELQASAAALEAELNRDHPDAAGHI CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH ARLEAILGQLARCLASTTTGNPAAPMPPVDAAAVLKQLENALRAGDFAAYSLYIGNREAL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC NGHCGADALLELERRMRGFDFAEALAIVQSIEGGGQPPGG CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1645442 [H]