| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498623
Identifier: 34498623
GI number: 34498623
Start: 3452149
End: 3452976
Strand: Direct
Name: 34498623
Synonym: CV_3168
Alternate gene names: NA
Gene position: 3452149-3452976 (Clockwise)
Preceding gene: 34498621
Following gene: 34498625
Centisome position: 72.66
GC content: 63.04
Gene sequence:
>828_bases ATGACTTCGAACAATACCCAGAATAACGATCCACACCAGACAACGGAAGAGATTCCGCTGCCGCCGCCGGAAAGCGAAGT CACGCTGGCCAACCTGGCCATCCCACTGGGCGAAACCATACTGACGCTCAGCGGCGACGGCCGCCCCATCTACGGCATCC TGCAGCGCAGCCGGGCGATGACGGCCCAGTCCGACTATTTCCGCCTGCAGTTCCGCGGCTATGCCCGCTCCGACGGCGCG CACTGGCAGCCGCTGGAAGGCGACGACAGCCGTTTCCACGCCGTCTACAACCTGGCCTGGGTCAGGGTGGATCGCCCGAG CAAGACCGTCACCTTCGGTCCCAAGAGCGGCGTGCAGGCCAGTCCTGGACTGGCAGGCAGCGGCTTGGACGCCTATCTGT TCGCCAGCGTCATCGCCTGGGCCAAGGGCGTCTGCCCCGATTTCGCCATCAGCCCGGGCATGATCACCATGGGACAGAAC CATACCGAGGAAGAACGGCTGAAGTGCCACGCCTTCTATGCCGGCCAGGGCTTCCAGTTCGAGTGGCAGGATCCGGCCCA GCGCAGCGCGCTGTATTTCAAGGACAAGGTGAACAAGCTCTTGGGCGTCTGGAACAAGGAAGCGGTCAAGGAATTCGGCG GCGAGGAAATGCTGAAGACGCTTGCCGGCCAGGACGAGGCCCGGGCCGAGCTGCAGCAGCAGCTGGACAAGCTGGAAAGC GCGCACGACAGCCTGAAGCGCGCGCTGCAAAAGGAAAAAAGCACCTCGCAAATCCTGACCGGGGTGCTGATACTGGCAGC CATCTTCGCGATCTGGGCCGTCATCTAA
Upstream 100 bases:
>100_bases AGCGCAAGCGCGCTCCCCTACAATGTAGGATAGAATTCCCATGCCGATGGCGTCCCGCGGGCGCAGGCACACGACCACCC AGCGACAGAACCCTAGCCAC
Downstream 100 bases:
>100_bases GCGCCTGTTCGCGATCTTTTGGCGGCATCGGCCGTTTTCTGCCGGACGCTGGGCGCCAACAACGGCCTACCGCAGCGTCA TTCGCAGCCGGGGACGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTSNNTQNNDPHQTTEEIPLPPPESEVTLANLAIPLGETILTLSGDGRPIYGILQRSRAMTAQSDYFRLQFRGYARSDGA HWQPLEGDDSRFHAVYNLAWVRVDRPSKTVTFGPKSGVQASPGLAGSGLDAYLFASVIAWAKGVCPDFAISPGMITMGQN HTEEERLKCHAFYAGQGFQFEWQDPAQRSALYFKDKVNKLLGVWNKEAVKEFGGEEMLKTLAGQDEARAELQQQLDKLES AHDSLKRALQKEKSTSQILTGVLILAAIFAIWAVI
Sequences:
>Translated_275_residues MTSNNTQNNDPHQTTEEIPLPPPESEVTLANLAIPLGETILTLSGDGRPIYGILQRSRAMTAQSDYFRLQFRGYARSDGA HWQPLEGDDSRFHAVYNLAWVRVDRPSKTVTFGPKSGVQASPGLAGSGLDAYLFASVIAWAKGVCPDFAISPGMITMGQN HTEEERLKCHAFYAGQGFQFEWQDPAQRSALYFKDKVNKLLGVWNKEAVKEFGGEEMLKTLAGQDEARAELQQQLDKLES AHDSLKRALQKEKSTSQILTGVLILAAIFAIWAVI >Mature_274_residues TSNNTQNNDPHQTTEEIPLPPPESEVTLANLAIPLGETILTLSGDGRPIYGILQRSRAMTAQSDYFRLQFRGYARSDGAH WQPLEGDDSRFHAVYNLAWVRVDRPSKTVTFGPKSGVQASPGLAGSGLDAYLFASVIAWAKGVCPDFAISPGMITMGQNH TEEERLKCHAFYAGQGFQFEWQDPAQRSALYFKDKVNKLLGVWNKEAVKEFGGEEMLKTLAGQDEARAELQQQLDKLESA HDSLKRALQKEKSTSQILTGVLILAAIFAIWAVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30398; Mature: 30266
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNNTQNNDPHQTTEEIPLPPPESEVTLANLAIPLGETILTLSGDGRPIYGILQRSRAM CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHEEECCCCEEEEECCCCCCHHHHHHHHHHH TAQSDYFRLQFRGYARSDGAHWQPLEGDDSRFHAVYNLAWVRVDRPSKTVTFGPKSGVQA CCCCCEEEEEEECEECCCCCCCCCCCCCCCHHEEEEEEEEEEECCCCCEEEECCCCCCCC SPGLAGSGLDAYLFASVIAWAKGVCPDFAISPGMITMGQNHTEEERLKCHAFYAGQGFQF CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHEEEEEECCCCCEE EWQDPAQRSALYFKDKVNKLLGVWNKEAVKEFGGEEMLKTLAGQDEARAELQQQLDKLES CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHH AHDSLKRALQKEKSTSQILTGVLILAAIFAIWAVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSNNTQNNDPHQTTEEIPLPPPESEVTLANLAIPLGETILTLSGDGRPIYGILQRSRAM CCCCCCCCCCCCCCCCCCCCCCCCCEEEEHEEECCCCEEEEECCCCCCHHHHHHHHHHH TAQSDYFRLQFRGYARSDGAHWQPLEGDDSRFHAVYNLAWVRVDRPSKTVTFGPKSGVQA CCCCCEEEEEEECEECCCCCCCCCCCCCCCHHEEEEEEEEEEECCCCCEEEECCCCCCCC SPGLAGSGLDAYLFASVIAWAKGVCPDFAISPGMITMGQNHTEEERLKCHAFYAGQGFQF CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHEEEEEECCCCCEE EWQDPAQRSALYFKDKVNKLLGVWNKEAVKEFGGEEMLKTLAGQDEARAELQQQLDKLES CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHH AHDSLKRALQKEKSTSQILTGVLILAAIFAIWAVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA