Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34498620

Identifier: 34498620

GI number: 34498620

Start: 3448500

End: 3450053

Strand: Direct

Name: 34498620

Synonym: CV_3165

Alternate gene names: NA

Gene position: 3448500-3450053 (Clockwise)

Preceding gene: 34498615

Following gene: 34498621

Centisome position: 72.58

GC content: 67.7

Gene sequence:

>1554_bases
ATGCGCAAACAACTTAACACTCTGACCAGTCCGCTTAATACCGCAGCGAAGAGTGGCCACTATGCTCACAGTCAATCGCT
TATGCAAACGGCTTGCCGCGGTGAACCCATGATCAAAAGAATACTGCTCGCCTCCGCCCTGCTCGGCCTGCCGCTATGCG
CGCTGGCCGGCATCGGCGCGGACGGCGCCCGCCACCTGCTGGCGCGCGCCGGCTTCGGCGCCAACCCGGCGCAGATCGAG
GCTTTCGCGCCGCTGAGCCGCGAGGCGGCGGTGGACAAGATACTGGCCGGTGTCCGCACCCAGGCGGCGACGCCGCCGCC
TGGGTGGGCCAACGAGCCGTTCGAACGGCCCGGCCAGCCCGGCCTCACCGAGGAACAGAAAAAGGCGCTGCAACAGGAAC
GCAATCAGCACGCGGTCGAGCTGCGCAGCTGGTGGCTGGCCGAGATGCGCAACACGCCGTCGCCGCTGACGGAGAAGATG
ACGCTGTTCTGGCACAACCATTTCGTGTCGGCGTTGGACAAGGTGCGCTCGCCGCAGATGATGTACCAGCAAAACCTGCT
GCTGCGCCACTACGCGCTGGGCGACTTCGGCCAGCTGCTGCACGCGGTGGCGCGCGATCCGGCGATGATGCGCTACCTCG
ACACCGCCAACAACCGCAAGGACCAGCCCAACGAGAACTTCGCCCGCGAGGTGATGGAGCTGTTCACGCTGGGCGAAGGC
CGCTACAGCGAACAGGACATCCGCGAGGCCGCCCGAGCCTTCACCGGCTGGGGCCTGGACCGCGACGACCAGTTCATCGT
CCGTCCGCGGCTGCGCGACACCGGCGAGAAAGTCATCTTCGGCCAGCGCGGCAATTTCGACGGCGACGACGTGATCGACC
TGCTGCTGCAGCAGCCTAGCACCGCGGTGTTCGTCACCAGCAAGCTGTGGCGCAACTTCGTGTCGCCGACGCCCGATCCG
GCCACGATCAACAAGCTGGCCGCCGACTTCCGCCGCGGCCATTACCAGTTGAAGCCCTTGATGCGCGCGCTGCTGCTGAC
GCCGCAGTTCTGGCGCAGCCAGGGCCAACTGGTGAAATCGCCGCTGGAGCTGACCGTAGGCACGCTGGTGACTTTCGACC
TCAATCCGCCGGACTGGCGCGTGATCGCCGGCCTGAACCGCCAGCTGGGTCAAGACGTGTTCGCGCCGCCCAACGTCAAG
GGCTGGCCCGGCGGCGAGGCCTGGATCAACAGCGCCACCCTGCTCACCCGCAAGCAGTTTCTGGACCGCATCGCCCGCGA
CGCCGCGCCGGCGCGCGACGCCTACGTCCAGGCCGATGGCGGCCTGAACGAGATGGCCGGCCGCGAGGCGCGCATCCGCC
GCTTCGTCGGCAACGGGCTGAATTCGATGAAGCTGCAACCCGATGAATGGGCCGCCGTCTACGGCGTCCGCACCGCCGCC
GACGCCGCGCGGCTGCTGCTGGCCGTGCCGCCGACCAACCCCTTGCCGCAGGGCGCCAGCGGCGCCAAGGCCATCGCCCA
GTTGCTGCTGGACCCGGCCTATCAGGTGGAATGA

Upstream 100 bases:

>100_bases
ATCACGCTCCCTCCGCTGGCATGATCCAGATCAGGTTCTCAGGGTGTCTCTCAGCCCGCATGGCGGGCACCCCCGGTGAC
AGGGCGACAGTATAGCCCAG

Downstream 100 bases:

>100_bases
GGAAACTTCCATGTTCAAGAGACGAGAATTCCTGAAAGCGGCCGGCGCCGGCCTGATGATGTCGGTGCTGCCCAATCTGT
CCTGGGCGCTGGCGCCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MRKQLNTLTSPLNTAAKSGHYAHSQSLMQTACRGEPMIKRILLASALLGLPLCALAGIGADGARHLLARAGFGANPAQIE
AFAPLSREAAVDKILAGVRTQAATPPPGWANEPFERPGQPGLTEEQKKALQQERNQHAVELRSWWLAEMRNTPSPLTEKM
TLFWHNHFVSALDKVRSPQMMYQQNLLLRHYALGDFGQLLHAVARDPAMMRYLDTANNRKDQPNENFAREVMELFTLGEG
RYSEQDIREAARAFTGWGLDRDDQFIVRPRLRDTGEKVIFGQRGNFDGDDVIDLLLQQPSTAVFVTSKLWRNFVSPTPDP
ATINKLAADFRRGHYQLKPLMRALLLTPQFWRSQGQLVKSPLELTVGTLVTFDLNPPDWRVIAGLNRQLGQDVFAPPNVK
GWPGGEAWINSATLLTRKQFLDRIARDAAPARDAYVQADGGLNEMAGREARIRRFVGNGLNSMKLQPDEWAAVYGVRTAA
DAARLLLAVPPTNPLPQGASGAKAIAQLLLDPAYQVE

Sequences:

>Translated_517_residues
MRKQLNTLTSPLNTAAKSGHYAHSQSLMQTACRGEPMIKRILLASALLGLPLCALAGIGADGARHLLARAGFGANPAQIE
AFAPLSREAAVDKILAGVRTQAATPPPGWANEPFERPGQPGLTEEQKKALQQERNQHAVELRSWWLAEMRNTPSPLTEKM
TLFWHNHFVSALDKVRSPQMMYQQNLLLRHYALGDFGQLLHAVARDPAMMRYLDTANNRKDQPNENFAREVMELFTLGEG
RYSEQDIREAARAFTGWGLDRDDQFIVRPRLRDTGEKVIFGQRGNFDGDDVIDLLLQQPSTAVFVTSKLWRNFVSPTPDP
ATINKLAADFRRGHYQLKPLMRALLLTPQFWRSQGQLVKSPLELTVGTLVTFDLNPPDWRVIAGLNRQLGQDVFAPPNVK
GWPGGEAWINSATLLTRKQFLDRIARDAAPARDAYVQADGGLNEMAGREARIRRFVGNGLNSMKLQPDEWAAVYGVRTAA
DAARLLLAVPPTNPLPQGASGAKAIAQLLLDPAYQVE
>Mature_517_residues
MRKQLNTLTSPLNTAAKSGHYAHSQSLMQTACRGEPMIKRILLASALLGLPLCALAGIGADGARHLLARAGFGANPAQIE
AFAPLSREAAVDKILAGVRTQAATPPPGWANEPFERPGQPGLTEEQKKALQQERNQHAVELRSWWLAEMRNTPSPLTEKM
TLFWHNHFVSALDKVRSPQMMYQQNLLLRHYALGDFGQLLHAVARDPAMMRYLDTANNRKDQPNENFAREVMELFTLGEG
RYSEQDIREAARAFTGWGLDRDDQFIVRPRLRDTGEKVIFGQRGNFDGDDVIDLLLQQPSTAVFVTSKLWRNFVSPTPDP
ATINKLAADFRRGHYQLKPLMRALLLTPQFWRSQGQLVKSPLELTVGTLVTFDLNPPDWRVIAGLNRQLGQDVFAPPNVK
GWPGGEAWINSATLLTRKQFLDRIARDAAPARDAYVQADGGLNEMAGREARIRRFVGNGLNSMKLQPDEWAAVYGVRTAA
DAARLLLAVPPTNPLPQGASGAKAIAQLLLDPAYQVE

Specific function: Unknown

COG id: COG5267

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57339; Mature: 57339

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQLNTLTSPLNTAAKSGHYAHSQSLMQTACRGEPMIKRILLASALLGLPLCALAGIGA
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DGARHLLARAGFGANPAQIEAFAPLSREAAVDKILAGVRTQAATPPPGWANEPFERPGQP
HHHHHHHHHCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GLTEEQKKALQQERNQHAVELRSWWLAEMRNTPSPLTEKMTLFWHNHFVSALDKVRSPQM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
MYQQNLLLRHYALGDFGQLLHAVARDPAMMRYLDTANNRKDQPNENFAREVMELFTLGEG
HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
RYSEQDIREAARAFTGWGLDRDDQFIVRPRLRDTGEKVIFGQRGNFDGDDVIDLLLQQPS
CCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCC
TAVFVTSKLWRNFVSPTPDPATINKLAADFRRGHYQLKPLMRALLLTPQFWRSQGQLVKS
CEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCHHHHH
PLELTVGTLVTFDLNPPDWRVIAGLNRQLGQDVFAPPNVKGWPGGEAWINSATLLTRKQF
HHHEEEEEEEEEECCCCCCEEEECHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LDRIARDAAPARDAYVQADGGLNEMAGREARIRRFVGNGLNSMKLQPDEWAAVYGVRTAA
HHHHHHHCCCCCCCEEECCCCHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
DAARLLLAVPPTNPLPQGASGAKAIAQLLLDPAYQVE
HHHHEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRKQLNTLTSPLNTAAKSGHYAHSQSLMQTACRGEPMIKRILLASALLGLPLCALAGIGA
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DGARHLLARAGFGANPAQIEAFAPLSREAAVDKILAGVRTQAATPPPGWANEPFERPGQP
HHHHHHHHHCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GLTEEQKKALQQERNQHAVELRSWWLAEMRNTPSPLTEKMTLFWHNHFVSALDKVRSPQM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
MYQQNLLLRHYALGDFGQLLHAVARDPAMMRYLDTANNRKDQPNENFAREVMELFTLGEG
HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
RYSEQDIREAARAFTGWGLDRDDQFIVRPRLRDTGEKVIFGQRGNFDGDDVIDLLLQQPS
CCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCC
TAVFVTSKLWRNFVSPTPDPATINKLAADFRRGHYQLKPLMRALLLTPQFWRSQGQLVKS
CEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCHHHHH
PLELTVGTLVTFDLNPPDWRVIAGLNRQLGQDVFAPPNVKGWPGGEAWINSATLLTRKQF
HHHEEEEEEEEEECCCCCCEEEECHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LDRIARDAAPARDAYVQADGGLNEMAGREARIRRFVGNGLNSMKLQPDEWAAVYGVRTAA
HHHHHHHCCCCCCCEEECCCCHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
DAARLLLAVPPTNPLPQGASGAKAIAQLLLDPAYQVE
HHHHEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA