| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498611
Identifier: 34498611
GI number: 34498611
Start: 3441308
End: 3441715
Strand: Direct
Name: 34498611
Synonym: CV_3156
Alternate gene names: NA
Gene position: 3441308-3441715 (Clockwise)
Preceding gene: 34498610
Following gene: 34498612
Centisome position: 72.43
GC content: 71.32
Gene sequence:
>408_bases ATGGGCCGGACTCAGGCAATCCGGGCCGCACGGCGGCGGCTCGCAATAGCCGGACTGGCGCAGCCGCGCCGCCGGCTCCC TGGCCGCTCGCGCGCAGCGCGACAAGCGGGCGCGGGCGATCCCGCCTCCGCGCCACAAGCCGTAGCGGCGAATCGCGCGG AAAGCCAGGCCGGAACATCCCGCCCGGCCAGTGCCGGCCCGGTAAGCGCAGCCGAAGCCCTTGCGCGGCGACAGATGCCG CTGGTAGATCCGGATCAGGCACAACGCCAGCCATTTCGACACGGTCCCTTCCTTTCCCCAAGCGATTCATCATACCCATT CCCCGCCCACGCTGCTAAAGTCGTCGGCGAGCGCGCCCGCGCCGCCGGCGAGCGTTTCGGCACAATCTCGCCGCGCGCCG ACGCATAA
Upstream 100 bases:
>100_bases CTCCGACTGCCTTTCGGCGGCGGTTCCGCCGCCAGCCGGGCCAATAATGCGCCAGGCACTCGCCGGAGCGGCAGGCGGCA TCATCCAGGCAGCCATCGCA
Downstream 100 bases:
>100_bases CATCGTCGAACCCTCTAGCCACAGGAGAACCGATATGCGCACCACCCTGCTGATCGCCAGCCTGCTCGCCCTGCCGCTGG CCGCCCATGCCGACGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGRTQAIRAARRRLAIAGLAQPRRRLPGRSRAARQAGAGDPASAPQAVAANRAESQAGTSRPASAGPVSAAEALARRQMP LVDPDQAQRQPFRHGPFLSPSDSSYPFPAHAAKVVGERARAAGERFGTISPRADA
Sequences:
>Translated_135_residues MGRTQAIRAARRRLAIAGLAQPRRRLPGRSRAARQAGAGDPASAPQAVAANRAESQAGTSRPASAGPVSAAEALARRQMP LVDPDQAQRQPFRHGPFLSPSDSSYPFPAHAAKVVGERARAAGERFGTISPRADA >Mature_134_residues GRTQAIRAARRRLAIAGLAQPRRRLPGRSRAARQAGAGDPASAPQAVAANRAESQAGTSRPASAGPVSAAEALARRQMPL VDPDQAQRQPFRHGPFLSPSDSSYPFPAHAAKVVGERARAAGERFGTISPRADA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14111; Mature: 13980
Theoretical pI: Translated: 12.46; Mature: 12.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTQAIRAARRRLAIAGLAQPRRRLPGRSRAARQAGAGDPASAPQAVAANRAESQAGTS CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC RPASAGPVSAAEALARRQMPLVDPDQAQRQPFRHGPFLSPSDSSYPFPAHAAKVVGERAR CCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AAGERFGTISPRADA HHHHHCCCCCCCCCC >Mature Secondary Structure GRTQAIRAARRRLAIAGLAQPRRRLPGRSRAARQAGAGDPASAPQAVAANRAESQAGTS CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC RPASAGPVSAAEALARRQMPLVDPDQAQRQPFRHGPFLSPSDSSYPFPAHAAKVVGERAR CCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AAGERFGTISPRADA HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA