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The map label for this gene is fliF1 [H]

Identifier: 34498591

GI number: 34498591

Start: 3420829

End: 3422568

Strand: Reverse

Name: fliF1 [H]

Synonym: CV_3136

Alternate gene names: 34498591

Gene position: 3422568-3420829 (Counterclockwise)

Preceding gene: 34498592

Following gene: 34498590

Centisome position: 72.04

GC content: 67.07

Gene sequence:

>1740_bases
ATGGCTGATCTGGCAGAAGAAAACGCTACTCCAGTTTGGCGCGCTCGACTGAACGAGGCGGGAGACCGCTTCAAGGCGCT
GCCCAACAACCGAAAAATCCTGTTTCTTACGGCGCTGGCGGCGATTTTCGCCGTCGTCGTCGGCGCGGTGCTTCTCAACC
GCACGCCTTCCTACAAGATCCTGTTCTCCAATCTGGCCGACCGCGACGGCGGCCAGGTCACGGCCGCGCTGCAGCAGATG
AACGTTCCCTACCAGCTGGGCGAGGGCGGCGTGATCTCGGTGCCGGCGGACAAGGTGTACGACGTCCGCTTGAAGCTGGC
GGCCCAGGGCCTGCCCAAGGCCAGCGGCGTGGGCTTCGAACTGATGGACAACCAGAAGTTCGGCATCAGCCAGTTCGCCG
AGCAAGTCAATTACCAGCGCTCCATCGAGGGCGAGCTCGCCCGCACCATCGAGGCCATCTCCTCGGTGCAGAGCGCCCGC
GTCCACATCGCCACGCCCAAGCAGAGCGTGTTCGTCCGCGAGCAGCAGTCGCCCACCGCCTCGGTGATGCTGCAGCTGTA
CCCGGGACGCATGCTGGACGGCGGCCAGGTGGCCGGCATCCTGCACCTGGTGTCCAGTTCGGTGCCCAATCTGCCGTTGA
AGAACGTCACCATCGTCGACCAGGACGGCAACCTGTTGTCCAAGCAGGCCGGCCCGGACGAGAATTCCGGCCTGGATCAG
CGCCAGCTGGGCTTCGTGCGCCAGATCGAGGAGGGCTACGTCAAGCGCATCGAGGACATACTGGAGCCCATCTTCGGCCG
CGGCAACGCCCGCGCCCAGGTGACGGCCAACGTCGACTTCTCCGAAACCGAGCAGACGTCGGAAACCTACCGGCCCAACT
CCAGCCCCAATCCCTCGGCCACCCGCAGCCAGCAGATCAGCGAGAAGCTGGTCAACGGCTCGGCCAACCCCACCGGCGTG
CCGGGCGCGCTGTCCAACCAGCCGCCGTCGGCGGCGTCCGCGCCGATCACGCTGCCGCCGGGCGCCGCCCCGGGCACGGC
CAATCTGTCCGGGGGAAGCGTCAGCGCCAGCGGCACGCTGCAGCGCGACATCACCACCAATTACGAGGTGGACAAGACCA
TACAGCACACCAAGGTGCCGACCGGCGTGGTCAAGCGGCTGTCGGCCGCCGTGGTGGTCAACTATCGCCGCATGCCTGAC
AAGAGCGGCGAGATGAAGCCGACGCCGCTGACGCCGCAAGAGGTGCAGCAAATCAACAACCTGGTCAAGGAGGCGATGGG
CTACAACTCCGGCCGCGGCGATACGCTCAACGTGGTCAACGCCGCCTTCGCCGACAATGCCCAGCCGGTCACCATGCAGG
AGCGGGTGATCGATTACGTCAGCGGCAACGGCACCAGCCTGGTCAAGTACGGCTTGCTGGGGATCGCGGTGCTCTATCTG
CTGTTCGGCGTGGTGCGGCCCATCATGCGAGATCTGGTTCGGCCGCCGGCGCCTGCCCCCGGCGCCGAGGGCGAGGCTGC
GGCCGCCGGCGCGGCCGGGCCGGGAGGGCGCCTGCTGGGCGTGGCCGGGGAAGAGGGCGAACCCGGCGTCGCCGCCGCGA
TGGCGGGCGGCGGAGAAGACCCGCGCGAAGCGCAGAAGCGCCAGTACAGCAGCAACCTGGAAGCCGTGCGCGAGCTGGTG
AAGTCTGATCCGCGCATGGCGGCCCAGATCATCAAGGAATGGATAAGCGCCGATGAGTGA

Upstream 100 bases:

>100_bases
ACAAGCTGGTCAGCGCCTATCAGGAAATCATGAATACCCAAGTCTAGCGCTGCCGATGGCCACGGCCCGGCGGCGGTGGA
CCTAAACCACAAACCACCGT

Downstream 100 bases:

>100_bases
CAACGGAATCCGCAAGAGCGCCGTGCTGCTGTTCAGTCTCGGCCAGAACGAGGCGGTCGAGGTGTTCAAATACCTCGGCC
CCAAGGAAGTCCAGAAGATT

Product: flagellar M-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MADLAEENATPVWRARLNEAGDRFKALPNNRKILFLTALAAIFAVVVGAVLLNRTPSYKILFSNLADRDGGQVTAALQQM
NVPYQLGEGGVISVPADKVYDVRLKLAAQGLPKASGVGFELMDNQKFGISQFAEQVNYQRSIEGELARTIEAISSVQSAR
VHIATPKQSVFVREQQSPTASVMLQLYPGRMLDGGQVAGILHLVSSSVPNLPLKNVTIVDQDGNLLSKQAGPDENSGLDQ
RQLGFVRQIEEGYVKRIEDILEPIFGRGNARAQVTANVDFSETEQTSETYRPNSSPNPSATRSQQISEKLVNGSANPTGV
PGALSNQPPSAASAPITLPPGAAPGTANLSGGSVSASGTLQRDITTNYEVDKTIQHTKVPTGVVKRLSAAVVVNYRRMPD
KSGEMKPTPLTPQEVQQINNLVKEAMGYNSGRGDTLNVVNAAFADNAQPVTMQERVIDYVSGNGTSLVKYGLLGIAVLYL
LFGVVRPIMRDLVRPPAPAPGAEGEAAAAGAAGPGGRLLGVAGEEGEPGVAAAMAGGGEDPREAQKRQYSSNLEAVRELV
KSDPRMAAQIIKEWISADE

Sequences:

>Translated_579_residues
MADLAEENATPVWRARLNEAGDRFKALPNNRKILFLTALAAIFAVVVGAVLLNRTPSYKILFSNLADRDGGQVTAALQQM
NVPYQLGEGGVISVPADKVYDVRLKLAAQGLPKASGVGFELMDNQKFGISQFAEQVNYQRSIEGELARTIEAISSVQSAR
VHIATPKQSVFVREQQSPTASVMLQLYPGRMLDGGQVAGILHLVSSSVPNLPLKNVTIVDQDGNLLSKQAGPDENSGLDQ
RQLGFVRQIEEGYVKRIEDILEPIFGRGNARAQVTANVDFSETEQTSETYRPNSSPNPSATRSQQISEKLVNGSANPTGV
PGALSNQPPSAASAPITLPPGAAPGTANLSGGSVSASGTLQRDITTNYEVDKTIQHTKVPTGVVKRLSAAVVVNYRRMPD
KSGEMKPTPLTPQEVQQINNLVKEAMGYNSGRGDTLNVVNAAFADNAQPVTMQERVIDYVSGNGTSLVKYGLLGIAVLYL
LFGVVRPIMRDLVRPPAPAPGAEGEAAAAGAAGPGGRLLGVAGEEGEPGVAAAMAGGGEDPREAQKRQYSSNLEAVRELV
KSDPRMAAQIIKEWISADE
>Mature_578_residues
ADLAEENATPVWRARLNEAGDRFKALPNNRKILFLTALAAIFAVVVGAVLLNRTPSYKILFSNLADRDGGQVTAALQQMN
VPYQLGEGGVISVPADKVYDVRLKLAAQGLPKASGVGFELMDNQKFGISQFAEQVNYQRSIEGELARTIEAISSVQSARV
HIATPKQSVFVREQQSPTASVMLQLYPGRMLDGGQVAGILHLVSSSVPNLPLKNVTIVDQDGNLLSKQAGPDENSGLDQR
QLGFVRQIEEGYVKRIEDILEPIFGRGNARAQVTANVDFSETEQTSETYRPNSSPNPSATRSQQISEKLVNGSANPTGVP
GALSNQPPSAASAPITLPPGAAPGTANLSGGSVSASGTLQRDITTNYEVDKTIQHTKVPTGVVKRLSAAVVVNYRRMPDK
SGEMKPTPLTPQEVQQINNLVKEAMGYNSGRGDTLNVVNAAFADNAQPVTMQERVIDYVSGNGTSLVKYGLLGIAVLYLL
FGVVRPIMRDLVRPPAPAPGAEGEAAAAGAAGPGGRLLGVAGEEGEPGVAAAMAGGGEDPREAQKRQYSSNLEAVRELVK
SDPRMAAQIIKEWISADE

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=574, Percent_Identity=45.1219512195122, Blast_Score=434, Evalue=1e-122,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 61452; Mature: 61321

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLAEENATPVWRARLNEAGDRFKALPNNRKILFLTALAAIFAVVVGAVLLNRTPSYKI
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEE
LFSNLADRDGGQVTAALQQMNVPYQLGEGGVISVPADKVYDVRLKLAAQGLPKASGVGFE
EECHHCCCCCCHHHHHHHHCCCCEEECCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCEE
LMDNQKFGISQFAEQVNYQRSIEGELARTIEAISSVQSARVHIATPKQSVFVREQQSPTA
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEECCCCCHH
SVMLQLYPGRMLDGGQVAGILHLVSSSVPNLPLKNVTIVDQDGNLLSKQAGPDENSGLDQ
HEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCH
RQLGFVRQIEEGYVKRIEDILEPIFGRGNARAQVTANVDFSETEQTSETYRPNSSPNPSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCH
TRSQQISEKLVNGSANPTGVPGALSNQPPSAASAPITLPPGAAPGTANLSGGSVSASGTL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCE
QRDITTNYEVDKTIQHTKVPTGVVKRLSAAVVVNYRRMPDKSGEMKPTPLTPQEVQQINN
EECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHEEHHHCCCCCCCCCCCCCCHHHHHHHHH
LVKEAMGYNSGRGDTLNVVNAAFADNAQPVTMQERVIDYVSGNGTSLVKYGLLGIAVLYL
HHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LFGVVRPIMRDLVRPPAPAPGAEGEAAAAGAAGPGGRLLGVAGEEGEPGVAAAMAGGGED
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCC
PREAQKRQYSSNLEAVRELVKSDPRMAAQIIKEWISADE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADLAEENATPVWRARLNEAGDRFKALPNNRKILFLTALAAIFAVVVGAVLLNRTPSYKI
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEE
LFSNLADRDGGQVTAALQQMNVPYQLGEGGVISVPADKVYDVRLKLAAQGLPKASGVGFE
EECHHCCCCCCHHHHHHHHCCCCEEECCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCEE
LMDNQKFGISQFAEQVNYQRSIEGELARTIEAISSVQSARVHIATPKQSVFVREQQSPTA
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEECCCCCHH
SVMLQLYPGRMLDGGQVAGILHLVSSSVPNLPLKNVTIVDQDGNLLSKQAGPDENSGLDQ
HEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCH
RQLGFVRQIEEGYVKRIEDILEPIFGRGNARAQVTANVDFSETEQTSETYRPNSSPNPSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCH
TRSQQISEKLVNGSANPTGVPGALSNQPPSAASAPITLPPGAAPGTANLSGGSVSASGTL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCE
QRDITTNYEVDKTIQHTKVPTGVVKRLSAAVVVNYRRMPDKSGEMKPTPLTPQEVQQINN
EECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHEEHHHCCCCCCCCCCCCCCHHHHHHHHH
LVKEAMGYNSGRGDTLNVVNAAFADNAQPVTMQERVIDYVSGNGTSLVKYGLLGIAVLYL
HHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LFGVVRPIMRDLVRPPAPAPGAEGEAAAAGAAGPGGRLLGVAGEEGEPGVAAAMAGGGED
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCC
PREAQKRQYSSNLEAVRELVKSDPRMAAQIIKEWISADE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 1551848; 8224881 [H]