| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is fliK [C]
Identifier: 34498587
GI number: 34498587
Start: 3416156
End: 3417091
Strand: Reverse
Name: fliK [C]
Synonym: CV_3132
Alternate gene names: 34498587
Gene position: 3417091-3416156 (Counterclockwise)
Preceding gene: 34498588
Following gene: 34498586
Centisome position: 71.92
GC content: 64.21
Gene sequence:
>936_bases ATGACTATCATCGTGAACACGCCGGCGGCGAATGCCGGCACGCAGGCATCTCCGGGAAGCGTCGCTTCCGCCGGCAACTC CGGCAGCGGCGCGGCCGGCGATCTGTTCGCCAGCCTGCTGGGCATCCAGATGAGCACGATGGGCGCGATGCTGCCGGAGC TGGGCGATGGCGGCAACGGCAAGTCCGCCGACGACAAGCCGGCGGCCAAGGACGGCCAGGGCGACGGAACGCTGCAGGCC GCGCTGGCGATGCCCATGCTGACCGCGTTGCAGCTCCAGCCGCAGCAGGCCGAGACCAAGACTCCGGTTCAGGATCTGCT GACCCAGCAAACGACCGCCAAGGTCGATCCCTCTTTGCTGTTGCAGACGGCGAAGCAGGGCTTCAATTGGCAGGACGGCC AGCAAAAATTGCCGGATCCGGAAACCACGGCCGCGCAATTCTTGCCGCTGCAGCAGTTGCAGCAAGCGCAGCCGCAACAG GCCGCCCATGTTCAGAGCAATGCCGGCCTGCCCCAGCTGACCCTGCCCCAGACCCTGACCGATCCGAATTGGGGCAAGGC CCTGGGCGAGCAGATGCTGAGCATGGTCAACCTGAAGATGGACAAGGCGCAGATTCAGCTCAATCCGCCGCAGATGGGGC CGATCGAGGTGACTTTGAAAATGAACGGCACCGACCAGGCCCAGGTTTTGTTCACCGCCGCCGTGCCGGCGACGCGCGAG GCGTTGGAAAGCAATATGCACCGGCTGAGTTCCATGCTGTCCTCCAGCGGCATCCAGTTGACCGACTCCCAGGTTTCCAG CGGCAATTCCGGCCAGCAGCAACAGGCATTCCAGCAAAGGAAAGGACAGCACCAGCCCGTCATCGGCGAGGCTGAGGTCG TGGACGCCTTGAGCGCGATCAAGACCGCACGCGGCATACTCAGCATCTTCGCTTGA
Upstream 100 bases:
>100_bases TCGCCACCCGCCGTTTCTGGGACAGGACTCATGGCGGCGATGCCTGAATTGGCACGCTCCTTGCTTTGATTGGCCTCGTT ATACTCGTAGAGGCATCGCC
Downstream 100 bases:
>100_bases CCCGATTTGAGATTGACACTGTTCAGCAGGCCGAGAAAACAGGAAAATGTGGCCGGGAAATCGTTTAAGATTTCACTAGG AACTCCATAAAAGAACAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTIIVNTPAANAGTQASPGSVASAGNSGSGAAGDLFASLLGIQMSTMGAMLPELGDGGNGKSADDKPAAKDGQGDGTLQA ALAMPMLTALQLQPQQAETKTPVQDLLTQQTTAKVDPSLLLQTAKQGFNWQDGQQKLPDPETTAAQFLPLQQLQQAQPQQ AAHVQSNAGLPQLTLPQTLTDPNWGKALGEQMLSMVNLKMDKAQIQLNPPQMGPIEVTLKMNGTDQAQVLFTAAVPATRE ALESNMHRLSSMLSSSGIQLTDSQVSSGNSGQQQQAFQQRKGQHQPVIGEAEVVDALSAIKTARGILSIFA
Sequences:
>Translated_311_residues MTIIVNTPAANAGTQASPGSVASAGNSGSGAAGDLFASLLGIQMSTMGAMLPELGDGGNGKSADDKPAAKDGQGDGTLQA ALAMPMLTALQLQPQQAETKTPVQDLLTQQTTAKVDPSLLLQTAKQGFNWQDGQQKLPDPETTAAQFLPLQQLQQAQPQQ AAHVQSNAGLPQLTLPQTLTDPNWGKALGEQMLSMVNLKMDKAQIQLNPPQMGPIEVTLKMNGTDQAQVLFTAAVPATRE ALESNMHRLSSMLSSSGIQLTDSQVSSGNSGQQQQAFQQRKGQHQPVIGEAEVVDALSAIKTARGILSIFA >Mature_310_residues TIIVNTPAANAGTQASPGSVASAGNSGSGAAGDLFASLLGIQMSTMGAMLPELGDGGNGKSADDKPAAKDGQGDGTLQAA LAMPMLTALQLQPQQAETKTPVQDLLTQQTTAKVDPSLLLQTAKQGFNWQDGQQKLPDPETTAAQFLPLQQLQQAQPQQA AHVQSNAGLPQLTLPQTLTDPNWGKALGEQMLSMVNLKMDKAQIQLNPPQMGPIEVTLKMNGTDQAQVLFTAAVPATREA LESNMHRLSSMLSSSGIQLTDSQVSSGNSGQQQQAFQQRKGQHQPVIGEAEVVDALSAIKTARGILSIFA
Specific function: Controls The Length Of The Flagellar Hook. [C]
COG id: COG3144
COG function: function code N; Flagellar hook-length control protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32470; Mature: 32339
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIVNTPAANAGTQASPGSVASAGNSGSGAAGDLFASLLGIQMSTMGAMLPELGDGGNG CEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KSADDKPAAKDGQGDGTLQAALAMPMLTALQLQPQQAETKTPVQDLLTQQTTAKVDPSLL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHCCHHHH LQTAKQGFNWQDGQQKLPDPETTAAQFLPLQQLQQAQPQQAAHVQSNAGLPQLTLPQTLT HHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCC DPNWGKALGEQMLSMVNLKMDKAQIQLNPPQMGPIEVTLKMNGTDQAQVLFTAAVPATRE CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCHHHHH ALESNMHRLSSMLSSSGIQLTDSQVSSGNSGQQQQAFQQRKGQHQPVIGEAEVVDALSAI HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH KTARGILSIFA HHHHHHHHHCC >Mature Secondary Structure TIIVNTPAANAGTQASPGSVASAGNSGSGAAGDLFASLLGIQMSTMGAMLPELGDGGNG EEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KSADDKPAAKDGQGDGTLQAALAMPMLTALQLQPQQAETKTPVQDLLTQQTTAKVDPSLL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHCCHHHH LQTAKQGFNWQDGQQKLPDPETTAAQFLPLQQLQQAQPQQAAHVQSNAGLPQLTLPQTLT HHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCC DPNWGKALGEQMLSMVNLKMDKAQIQLNPPQMGPIEVTLKMNGTDQAQVLFTAAVPATRE CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCHHHHH ALESNMHRLSSMLSSSGIQLTDSQVSSGNSGQQQQAFQQRKGQHQPVIGEAEVVDALSAI HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH KTARGILSIFA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA