| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34498573
Identifier: 34498573
GI number: 34498573
Start: 3405341
End: 3405958
Strand: Reverse
Name: 34498573
Synonym: CV_3118
Alternate gene names: NA
Gene position: 3405958-3405341 (Counterclockwise)
Preceding gene: 34498574
Following gene: 34498572
Centisome position: 71.69
GC content: 70.87
Gene sequence:
>618_bases ATGGGTCCCGTTTTTGATGGCGGGCTGCGCGGAGCGGGGAGAGGGATGAGGCGCTGGAACACGACCGAACGGCTGCTGCT GGCGCTGTGGTTGTCCCTGCTCGTCCATGCGGCGCTGCTGTGGCTGCCGCTGCGGCCCGGACAATGGAGCGGCTGGCATG AGGCGCTGCGGGTGCGGCTGCGGGGCGAGCCGGCGCCGGCCGCCGCCGAGCCGCCGCCGATCGCGCCGCCGCTGGCGGAA GCGCCCCAGCCCGAGCAGGACGACATGCCTCCGGAAGACATCGGAGACGATAGATTGCGTCTGGGCGCCGACATCTATTA CCCGGCCAGGGAACTGGACCAGCTGGCGCAGGAGCGCGGCCGCATCGCGCTGCCGGATGTGGTTTTGAGCGGGTCGACGC AGCCGATCGAGGTGCTGGTGTTCATCGGCGCCGGCGGCAGGGTGGACGCGGTGCGTTTCGAGGGCGAGGTGAATGCCAAG CTGGCCGATGCCGTCGCGCCGGTTTTCCGCGGCGCGGATTACCAGCCGGCGCGCAAGGACGGACGGGCGGTGAAGAGCTA CAAGCGGATACGGATCGAGCCGCAGACGGAGGCCGCGCCGCCGCCCCTGTCGCATTGA
Upstream 100 bases:
>100_bases GGTGTTCGCCAATGGCCGCATGGTGCCGGGCGCGATCGACGGCGGCGACATCGAGCAGCTGCTGAACGCCAAGTAAGCCA ACAGCGACGGGGCCGGTTTC
Downstream 100 bases:
>100_bases GCCCGCTTCATGCTACATTGTCCCCCGTTCCGGCGCATGCCGGAGGGCTAACACCGCCAGGGACGGAGCCAACCGTCCCG GCAATCGACAAAGGAAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MGPVFDGGLRGAGRGMRRWNTTERLLLALWLSLLVHAALLWLPLRPGQWSGWHEALRVRLRGEPAPAAAEPPPIAPPLAE APQPEQDDMPPEDIGDDRLRLGADIYYPARELDQLAQERGRIALPDVVLSGSTQPIEVLVFIGAGGRVDAVRFEGEVNAK LADAVAPVFRGADYQPARKDGRAVKSYKRIRIEPQTEAAPPPLSH
Sequences:
>Translated_205_residues MGPVFDGGLRGAGRGMRRWNTTERLLLALWLSLLVHAALLWLPLRPGQWSGWHEALRVRLRGEPAPAAAEPPPIAPPLAE APQPEQDDMPPEDIGDDRLRLGADIYYPARELDQLAQERGRIALPDVVLSGSTQPIEVLVFIGAGGRVDAVRFEGEVNAK LADAVAPVFRGADYQPARKDGRAVKSYKRIRIEPQTEAAPPPLSH >Mature_204_residues GPVFDGGLRGAGRGMRRWNTTERLLLALWLSLLVHAALLWLPLRPGQWSGWHEALRVRLRGEPAPAAAEPPPIAPPLAEA PQPEQDDMPPEDIGDDRLRLGADIYYPARELDQLAQERGRIALPDVVLSGSTQPIEVLVFIGAGGRVDAVRFEGEVNAKL ADAVAPVFRGADYQPARKDGRAVKSYKRIRIEPQTEAAPPPLSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22419; Mature: 22288
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPVFDGGLRGAGRGMRRWNTTERLLLALWLSLLVHAALLWLPLRPGQWSGWHEALRVRL CCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEHC RGEPAPAAAEPPPIAPPLAEAPQPEQDDMPPEDIGDDRLRLGADIYYPARELDQLAQERG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCC RIALPDVVLSGSTQPIEVLVFIGAGGRVDAVRFEGEVNAKLADAVAPVFRGADYQPARKD CEECCCEEECCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHC GRAVKSYKRIRIEPQTEAAPPPLSH CHHHHHHHHEECCCCCCCCCCCCCC >Mature Secondary Structure GPVFDGGLRGAGRGMRRWNTTERLLLALWLSLLVHAALLWLPLRPGQWSGWHEALRVRL CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEHC RGEPAPAAAEPPPIAPPLAEAPQPEQDDMPPEDIGDDRLRLGADIYYPARELDQLAQERG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCC RIALPDVVLSGSTQPIEVLVFIGAGGRVDAVRFEGEVNAKLADAVAPVFRGADYQPARKD CEECCCEEECCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHC GRAVKSYKRIRIEPQTEAAPPPLSH CHHHHHHHHEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA