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The map label for this gene is argR [H]

Identifier: 34498543

GI number: 34498543

Start: 3367967

End: 3368962

Strand: Direct

Name: argR [H]

Synonym: CV_3088

Alternate gene names: 34498543

Gene position: 3367967-3368962 (Clockwise)

Preceding gene: 34498542

Following gene: 34498546

Centisome position: 70.89

GC content: 64.56

Gene sequence:

>996_bases
ATGGGTCATCCGTCCCAAACCGGCAAAGCCCTGCGCTTTGGCTTCCTGCTCCTGCCCCATGCCTCGATGGCCGATTTCGC
CAGCGCCTCCGAGGTGCTGACGCACGCCAATCTGCTGGCGGAAAAACGCCTGTACGAAACCCTGTTGCTGTCGCTGGACG
GCGCCCCGGTGCAACTGTCCAACGGCATCAAGCTGGCTGTGGACCTGCCGCTGTCCTACGCGCCCAAGCTGGACTATCTG
CTGATCCTGGCGGATGAGATCGGCAACGATTTCGCGCTGGAAGACCTGAGCAAGGGCCTGGCCGGCGGCAACGCCGACAA
GATGACGCTGGCCGGCATAGGCTGCGGCAGCTACTGGCTGGCGCGCGCCGGCCTGCTGGCTGGGCAGCGCGCCACCATAC
ACTGGCGCGAGATTTCTCGCCTGACCGAGGAGTTTCCGGACGTGATCGTCACGTCCAATCTTTACGAGAGCGAAGGCCGC
TGCCTAAGCTGCGCCGGCGGCGCCGCCACTTTCGACTTCATGCTGGATCTGGTGGGCAAGCAACAGGGCCACGAGTTCAT
CGCCCAATTGTCCGAACTGTTCAGCATGGAGCGCATCCGTCCCGGCAACGAACGCCAGCGCATCCCGCTGGCCACCCGCA
TCGGCGGCAGCCAACCCAAGCTGACCGAGGCGGTCAGCCTGATGGAGGCGAACATAGAAGAGCCGCTCTCCACCGACGAC
ATCGCCTACTACGTCGGCGTGTCCCGCCGGCAGCTGGAGAGGCTGTTCAAGCAGTATCTGGGCACGGTGCCGTCCAAATA
CTACCTGGAGCTGCGTCTGAACCGCGCGCGCCAGCTGCTGCAGCAGACCAGCAAATCCATCGTCCAGATCGGACTGGCCT
GCGGCTTCTCCAGCGGTCCGCATTTCTCCAGCACCTACCGCAACCATTTCAACATCACCCCGCGCGAGGAACGCGCTCAA
CGCGCCCAGCCAGGCGCCCTGTCCCGGGCGCCCTGA

Upstream 100 bases:

>100_bases
CCGCCGAAATAAATCGTACAATGCAGGGCAAGATAACGCCGCCATGCCAGGCCAGCCTGACATGGCGGCATTTTTGCCAA
CTGACACAGACAATCAAACC

Downstream 100 bases:

>100_bases
CCGTCAGCTCACCTGCCGCTCCGCCTGCAAAGCCAGCGGCAGCTCGATGCGGAAGCAGGCGCCGCTGGCCGGGATGTTTT
CCGCCGAGATCAGCCCGCCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MGHPSQTGKALRFGFLLLPHASMADFASASEVLTHANLLAEKRLYETLLLSLDGAPVQLSNGIKLAVDLPLSYAPKLDYL
LILADEIGNDFALEDLSKGLAGGNADKMTLAGIGCGSYWLARAGLLAGQRATIHWREISRLTEEFPDVIVTSNLYESEGR
CLSCAGGAATFDFMLDLVGKQQGHEFIAQLSELFSMERIRPGNERQRIPLATRIGGSQPKLTEAVSLMEANIEEPLSTDD
IAYYVGVSRRQLERLFKQYLGTVPSKYYLELRLNRARQLLQQTSKSIVQIGLACGFSSGPHFSSTYRNHFNITPREERAQ
RAQPGALSRAP

Sequences:

>Translated_331_residues
MGHPSQTGKALRFGFLLLPHASMADFASASEVLTHANLLAEKRLYETLLLSLDGAPVQLSNGIKLAVDLPLSYAPKLDYL
LILADEIGNDFALEDLSKGLAGGNADKMTLAGIGCGSYWLARAGLLAGQRATIHWREISRLTEEFPDVIVTSNLYESEGR
CLSCAGGAATFDFMLDLVGKQQGHEFIAQLSELFSMERIRPGNERQRIPLATRIGGSQPKLTEAVSLMEANIEEPLSTDD
IAYYVGVSRRQLERLFKQYLGTVPSKYYLELRLNRARQLLQQTSKSIVQIGLACGFSSGPHFSSTYRNHFNITPREERAQ
RAQPGALSRAP
>Mature_330_residues
GHPSQTGKALRFGFLLLPHASMADFASASEVLTHANLLAEKRLYETLLLSLDGAPVQLSNGIKLAVDLPLSYAPKLDYLL
ILADEIGNDFALEDLSKGLAGGNADKMTLAGIGCGSYWLARAGLLAGQRATIHWREISRLTEEFPDVIVTSNLYESEGRC
LSCAGGAATFDFMLDLVGKQQGHEFIAQLSELFSMERIRPGNERQRIPLATRIGGSQPKLTEAVSLMEANIEEPLSTDDI
AYYVGVSRRQLERLFKQYLGTVPSKYYLELRLNRARQLLQQTSKSIVQIGLACGFSSGPHFSSTYRNHFNITPREERAQR
AQPGALSRAP

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=112, Percent_Identity=33.9285714285714, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36389; Mature: 36258

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHPSQTGKALRFGFLLLPHASMADFASASEVLTHANLLAEKRLYETLLLSLDGAPVQLS
CCCCCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
NGIKLAVDLPLSYAPKLDYLLILADEIGNDFALEDLSKGLAGGNADKMTLAGIGCGSYWL
CCEEEEEECCCCCCCCCCEEEEEEHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHH
ARAGLLAGQRATIHWREISRLTEEFPDVIVTSNLYESEGRCLSCAGGAATFDFMLDLVGK
HHHHHHCCCCCEEHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHCC
QQGHEFIAQLSELFSMERIRPGNERQRIPLATRIGGSQPKLTEAVSLMEANIEEPLSTDD
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC
IAYYVGVSRRQLERLFKQYLGTVPSKYYLELRLNRARQLLQQTSKSIVQIGLACGFSSGP
EEEEECCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HFSSTYRNHFNITPREERAQRAQPGALSRAP
CCCHHHCCCCCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GHPSQTGKALRFGFLLLPHASMADFASASEVLTHANLLAEKRLYETLLLSLDGAPVQLS
CCCCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
NGIKLAVDLPLSYAPKLDYLLILADEIGNDFALEDLSKGLAGGNADKMTLAGIGCGSYWL
CCEEEEEECCCCCCCCCCEEEEEEHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHH
ARAGLLAGQRATIHWREISRLTEEFPDVIVTSNLYESEGRCLSCAGGAATFDFMLDLVGK
HHHHHHCCCCCEEHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHCC
QQGHEFIAQLSELFSMERIRPGNERQRIPLATRIGGSQPKLTEAVSLMEANIEEPLSTDD
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC
IAYYVGVSRRQLERLFKQYLGTVPSKYYLELRLNRARQLLQQTSKSIVQIGLACGFSSGP
EEEEECCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HFSSTYRNHFNITPREERAQRAQPGALSRAP
CCCHHHCCCCCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]