Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34498518

Identifier: 34498518

GI number: 34498518

Start: 3342566

End: 3343243

Strand: Direct

Name: 34498518

Synonym: CV_3063

Alternate gene names: NA

Gene position: 3342566-3343243 (Clockwise)

Preceding gene: 34498511

Following gene: 34498524

Centisome position: 70.35

GC content: 70.06

Gene sequence:

>678_bases
ATGATTGAGACAAATTACTGGATTCTGTTCCTCGCCGGCCTGCTGGGGGGAGGACATTGCGTCGGCATGTGCGGCGGCAT
CGTCGCCGCCCTCACCCTGCACCAGCCTACCGGCCACGCCCGTTGGCGGGTGCTGGCCGGCTACAATCTCGGACGCATCG
CCAGTTACGCGCTGATCGGCGCGCTGCTGGGCGGGGTGGCTGCCGGCGGACTCAGCCTGGCGTCCACGCATTCCTGGCAG
CTGGGCCTGGCCGCGCTGGCCGATCTGATGCTGATCGCGATGGGCCTCTATCTGGCGGGATTCGCCCAGGCCGTCACCGC
GCTTGAAAAGCTGGGACAGCCCGTCTGGCGGCGGATTCAGCCGCTGGTGGGGCGGCTGCTGCCGGTGCGATCCGCCGGCC
GCGCCGTCGCGGTGGGCGCGGTATGGGGCTGGCTGCCCTGCGGACTGGTCTACAGCGCGTCGATCTCGGCGCTGGCCAGC
GGCTCGGCCGGCGCCGGCGCCGGCCTGATGCTGGCCTTCGGCCTGGGCACGCTGCCCAACCTGTTGCTGATGGGGGTGTT
CGCCGACAGCCTGCGCCGCTGGATGCAAAAACGCCCAGTGCGGCTGGCGGCCGGACTGGGCGTGGCGGGAATCGGCGCGT
GGAAGCTGGCTCAGCTGGTCAGCGGAACGATTTCATGA

Upstream 100 bases:

>100_bases
AACAATCCGCCGTCAACCCCATCGTCAAGCCAAATCAGCGGCTTACCGCCGCTCCGTCATGCCCTCTGTTACCATAGAGC
TTTCCTGAACCGCTTGCGGC

Downstream 100 bases:

>100_bases
TGGTGTCGACGTTGTAGCGCATCAGCTGCAGATAGCTGGCGGCCGGACCGCCGGGGCCGGACAGCGCGTCGGCGTACAGC
TTGCCGCCGATCTGCACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIETNYWILFLAGLLGGGHCVGMCGGIVAALTLHQPTGHARWRVLAGYNLGRIASYALIGALLGGVAAGGLSLASTHSWQ
LGLAALADLMLIAMGLYLAGFAQAVTALEKLGQPVWRRIQPLVGRLLPVRSAGRAVAVGAVWGWLPCGLVYSASISALAS
GSAGAGAGLMLAFGLGTLPNLLLMGVFADSLRRWMQKRPVRLAAGLGVAGIGAWKLAQLVSGTIS

Sequences:

>Translated_225_residues
MIETNYWILFLAGLLGGGHCVGMCGGIVAALTLHQPTGHARWRVLAGYNLGRIASYALIGALLGGVAAGGLSLASTHSWQ
LGLAALADLMLIAMGLYLAGFAQAVTALEKLGQPVWRRIQPLVGRLLPVRSAGRAVAVGAVWGWLPCGLVYSASISALAS
GSAGAGAGLMLAFGLGTLPNLLLMGVFADSLRRWMQKRPVRLAAGLGVAGIGAWKLAQLVSGTIS
>Mature_225_residues
MIETNYWILFLAGLLGGGHCVGMCGGIVAALTLHQPTGHARWRVLAGYNLGRIASYALIGALLGGVAAGGLSLASTHSWQ
LGLAALADLMLIAMGLYLAGFAQAVTALEKLGQPVWRRIQPLVGRLLPVRSAGRAVAVGAVWGWLPCGLVYSASISALAS
GSAGAGAGLMLAFGLGTLPNLLLMGVFADSLRRWMQKRPVRLAAGLGVAGIGAWKLAQLVSGTIS

Specific function: Unknown

COG id: COG2836

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23052; Mature: 23052

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETNYWILFLAGLLGGGHCVGMCGGIVAALTLHQPTGHARWRVLAGYNLGRIASYALIG
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHH
ALLGGVAAGGLSLASTHSWQLGLAALADLMLIAMGLYLAGFAQAVTALEKLGQPVWRRIQ
HHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
PLVGRLLPVRSAGRAVAVGAVWGWLPCGLVYSASISALASGSAGAGAGLMLAFGLGTLPN
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LLLMGVFADSLRRWMQKRPVRLAAGLGVAGIGAWKLAQLVSGTIS
HHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIETNYWILFLAGLLGGGHCVGMCGGIVAALTLHQPTGHARWRVLAGYNLGRIASYALIG
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHH
ALLGGVAAGGLSLASTHSWQLGLAALADLMLIAMGLYLAGFAQAVTALEKLGQPVWRRIQ
HHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
PLVGRLLPVRSAGRAVAVGAVWGWLPCGLVYSASISALASGSAGAGAGLMLAFGLGTLPN
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LLLMGVFADSLRRWMQKRPVRLAAGLGVAGIGAWKLAQLVSGTIS
HHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA