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The map label for this gene is fliF [H]

Identifier: 34498454

GI number: 34498454

Start: 3274642

End: 3276270

Strand: Reverse

Name: fliF [H]

Synonym: CV_2999

Alternate gene names: 34498454

Gene position: 3276270-3274642 (Counterclockwise)

Preceding gene: 34498455

Following gene: 34498453

Centisome position: 68.96

GC content: 70.53

Gene sequence:

>1629_bases
ATGGCGGGCCGCCAGTTGCTGCCCGCCAACGCCTGGCGCTACCTGCTGCCCATCGTGCTGCTGGCCATCGGCCTGAGCGT
GGTAGCCACGCTGTGGCTGTGGCGCGACGACGCCAGCTACAAGCCGGTGTTCGGCGCCCAGGAGAAGGTGAGCGGCGCCG
ACATGATGGCGGCGCTGGACGCCGAGAAGATTCCCTACCGCGTCCATCCGCAGACCGGCCAGGTGCTGGTGCCGGACGGC
GACCTGGCCCGCGCCCGGATGCAGCTGGCGGCCAAGGGCGTGGTGGCGCAGCTGCCGGCCGGCCTGGAGCTCTTGGACAA
GAACGACCCGCTGGGCGTCAGCCAGTTCGTGCAGGACGTGCGCTTCCGCCGCGGCCTGGAGGGCGAGCTGGTGCAGAGCA
TCCAGGCGCTGGATCCGGTGCGTTCGGCGCGGGTGCACCTGTCGCTGCCGCGCAGCACTTCCTTTGTCACCGCCGGCGGC
GAGAAGGGCTCCGCCTCGGTGGTGGTGACGCTGAAGCCGGGCCAACAGCTGTCCAGCGAGCAAATCGCCGCCGTGGTCAA
GCTGGTGGCCGGCAGCGTGGCTTCGCTCGATCCGTCCCAGGTGACGCTGGTCGACCAGGCCGGCAACCTGCTGTCCGCCC
ACGTCGACCTGAGCGACGGCGGCATCGCCGGCAACAACAGCGAGGCGGCGCGCCGCTTCCGCGACGAGGCGCTGCAGAAC
GCGCGCGACCTGCTGACGCCGGCGCTGGGCGCGGGCAATTTCAAGGTCAGCGTCACCGCCGACGTCGACAACGACCGCGT
CGAGGAAACCCGCGAGAAGTACGGCGAGGCGCCCAAGGTCACCAACGAGGCCTCGCGCGAGGAAACCAGCACCGAACGGA
TGGCGCTGGGCGTGCCCGGCTCCCTGAGCAACCGTCCGGTCAACACCGACTCCTCGTCCCCGGCCGCCGACAAGGCTGGC
AACAGCAAGAACGCCGTCACCCGCCAGTACGCGTACGACCGCAACATCACCAACATCAAGCGCGCGCGCGGCACGCTGCG
CCGCCTCAGCGTGGCGGTGGCGCTGAACCAGGCCGCGGCGCCGGGCGGCAAGGGTTGGCAGCCTGCCGAGCTGGCCAATA
TCGACAAGCTGCTGCGCAACGGCCTGGGCATCAACGCCGAGCGCGGCGACGTGCTGGCGGTGTCCACGCTGCGTTTCGCG
CAGCCGACGCCGGCGGAGCCGTTCTGGGAGCAGCCGGAAACCTGGTTCGAGGGCGCGCGCTGGGCCGCTTACGCGGTGGC
GCTGCTGCTGGCCTACCTGCTGTTGGCGCGGCCGCTGCTCAAGCTCGCCCGCCAGCTGGCCGAGCGCAAGCTGAACGATT
ACACGCCGGACGAGCTGGATGTGACGCCGGACGATCCGCTGCTGGACAACCGCCCGCTGCGTGAGGCCGCCAGCCAGCGC
CAGGCGGCGCTGTCGGCCGCGCCCGGCGACAGCCCGGTGGTGCCGCTGCTGGAAAATTATGACCTGCCGCCCGCCGGCTC
GCCGGTGGACGTGATGGTGGAACACCTGAAGGGCCTGGCCGCCAAGGAGCCGGAGCGCGTCGCGGAAGTGGTCAAGCAAT
GGGTGCAGAACAATGGACGCAAACAATAA

Upstream 100 bases:

>100_bases
GTGGTCGGCGCGGTCGACGACCTGATCAAGATGCAGCTGTAAGCGGGAGCCGACTGTGGTCAAACAATTGCGCAGCGGCC
TGGCCGCGGTTCAACAAAGA

Downstream 100 bases:

>100_bases
TCCGGCGCCGGAATCCCCGGCTTACATTCCGCCCGCGCCTGCCGCCGGCAACGGCCAGATGAGCGCGATCGAGCAGGCCG
CGGTGCTGCTGTTGTGCATG

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MAGRQLLPANAWRYLLPIVLLAIGLSVVATLWLWRDDASYKPVFGAQEKVSGADMMAALDAEKIPYRVHPQTGQVLVPDG
DLARARMQLAAKGVVAQLPAGLELLDKNDPLGVSQFVQDVRFRRGLEGELVQSIQALDPVRSARVHLSLPRSTSFVTAGG
EKGSASVVVTLKPGQQLSSEQIAAVVKLVAGSVASLDPSQVTLVDQAGNLLSAHVDLSDGGIAGNNSEAARRFRDEALQN
ARDLLTPALGAGNFKVSVTADVDNDRVEETREKYGEAPKVTNEASREETSTERMALGVPGSLSNRPVNTDSSSPAADKAG
NSKNAVTRQYAYDRNITNIKRARGTLRRLSVAVALNQAAAPGGKGWQPAELANIDKLLRNGLGINAERGDVLAVSTLRFA
QPTPAEPFWEQPETWFEGARWAAYAVALLLAYLLLARPLLKLARQLAERKLNDYTPDELDVTPDDPLLDNRPLREAASQR
QAALSAAPGDSPVVPLLENYDLPPAGSPVDVMVEHLKGLAAKEPERVAEVVKQWVQNNGRKQ

Sequences:

>Translated_542_residues
MAGRQLLPANAWRYLLPIVLLAIGLSVVATLWLWRDDASYKPVFGAQEKVSGADMMAALDAEKIPYRVHPQTGQVLVPDG
DLARARMQLAAKGVVAQLPAGLELLDKNDPLGVSQFVQDVRFRRGLEGELVQSIQALDPVRSARVHLSLPRSTSFVTAGG
EKGSASVVVTLKPGQQLSSEQIAAVVKLVAGSVASLDPSQVTLVDQAGNLLSAHVDLSDGGIAGNNSEAARRFRDEALQN
ARDLLTPALGAGNFKVSVTADVDNDRVEETREKYGEAPKVTNEASREETSTERMALGVPGSLSNRPVNTDSSSPAADKAG
NSKNAVTRQYAYDRNITNIKRARGTLRRLSVAVALNQAAAPGGKGWQPAELANIDKLLRNGLGINAERGDVLAVSTLRFA
QPTPAEPFWEQPETWFEGARWAAYAVALLLAYLLLARPLLKLARQLAERKLNDYTPDELDVTPDDPLLDNRPLREAASQR
QAALSAAPGDSPVVPLLENYDLPPAGSPVDVMVEHLKGLAAKEPERVAEVVKQWVQNNGRKQ
>Mature_541_residues
AGRQLLPANAWRYLLPIVLLAIGLSVVATLWLWRDDASYKPVFGAQEKVSGADMMAALDAEKIPYRVHPQTGQVLVPDGD
LARARMQLAAKGVVAQLPAGLELLDKNDPLGVSQFVQDVRFRRGLEGELVQSIQALDPVRSARVHLSLPRSTSFVTAGGE
KGSASVVVTLKPGQQLSSEQIAAVVKLVAGSVASLDPSQVTLVDQAGNLLSAHVDLSDGGIAGNNSEAARRFRDEALQNA
RDLLTPALGAGNFKVSVTADVDNDRVEETREKYGEAPKVTNEASREETSTERMALGVPGSLSNRPVNTDSSSPAADKAGN
SKNAVTRQYAYDRNITNIKRARGTLRRLSVAVALNQAAAPGGKGWQPAELANIDKLLRNGLGINAERGDVLAVSTLRFAQ
PTPAEPFWEQPETWFEGARWAAYAVALLLAYLLLARPLLKLARQLAERKLNDYTPDELDVTPDDPLLDNRPLREAASQRQ
AALSAAPGDSPVVPLLENYDLPPAGSPVDVMVEHLKGLAAKEPERVAEVVKQWVQNNGRKQ

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=567, Percent_Identity=30.5114638447972, Blast_Score=197, Evalue=2e-51,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 58291; Mature: 58159

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRQLLPANAWRYLLPIVLLAIGLSVVATLWLWRDDASYKPVFGAQEKVSGADMMAALD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHH
AEKIPYRVHPQTGQVLVPDGDLARARMQLAAKGVVAQLPAGLELLDKNDPLGVSQFVQDV
HHHCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHH
RFRRGLEGELVQSIQALDPVRSARVHLSLPRSTSFVTAGGEKGSASVVVTLKPGQQLSSE
HHHCCCCHHHHHHHHHHCHHHHCEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCCCHH
QIAAVVKLVAGSVASLDPSQVTLVDQAGNLLSAHVDLSDGGIAGNNSEAARRFRDEALQN
HHHHHHHHHHCHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
ARDLLTPALGAGNFKVSVTADVDNDRVEETREKYGEAPKVTNEASREETSTERMALGVPG
HHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCC
SLSNRPVNTDSSSPAADKAGNSKNAVTRQYAYDRNITNIKRARGTLRRLSVAVALNQAAA
CCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PGGKGWQPAELANIDKLLRNGLGINAERGDVLAVSTLRFAQPTPAEPFWEQPETWFEGAR
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHCCCH
WAAYAVALLLAYLLLARPLLKLARQLAERKLNDYTPDELDVTPDDPLLDNRPLREAASQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QAALSAAPGDSPVVPLLENYDLPPAGSPVDVMVEHLKGLAAKEPERVAEVVKQWVQNNGR
HHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
KQ
CC
>Mature Secondary Structure 
AGRQLLPANAWRYLLPIVLLAIGLSVVATLWLWRDDASYKPVFGAQEKVSGADMMAALD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHH
AEKIPYRVHPQTGQVLVPDGDLARARMQLAAKGVVAQLPAGLELLDKNDPLGVSQFVQDV
HHHCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHH
RFRRGLEGELVQSIQALDPVRSARVHLSLPRSTSFVTAGGEKGSASVVVTLKPGQQLSSE
HHHCCCCHHHHHHHHHHCHHHHCEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCCCHH
QIAAVVKLVAGSVASLDPSQVTLVDQAGNLLSAHVDLSDGGIAGNNSEAARRFRDEALQN
HHHHHHHHHHCHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
ARDLLTPALGAGNFKVSVTADVDNDRVEETREKYGEAPKVTNEASREETSTERMALGVPG
HHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCC
SLSNRPVNTDSSSPAADKAGNSKNAVTRQYAYDRNITNIKRARGTLRRLSVAVALNQAAA
CCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PGGKGWQPAELANIDKLLRNGLGINAERGDVLAVSTLRFAQPTPAEPFWEQPETWFEGAR
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHCCCH
WAAYAVALLLAYLLLARPLLKLARQLAERKLNDYTPDELDVTPDDPLLDNRPLREAASQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QAALSAAPGDSPVVPLLENYDLPPAGSPVDVMVEHLKGLAAKEPERVAEVVKQWVQNNGR
HHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
KQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8675317; 10984043 [H]