| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498405
Identifier: 34498405
GI number: 34498405
Start: 3228210
End: 3228995
Strand: Direct
Name: 34498405
Synonym: CV_2950
Alternate gene names: NA
Gene position: 3228210-3228995 (Clockwise)
Preceding gene: 34498404
Following gene: 34498409
Centisome position: 67.95
GC content: 67.18
Gene sequence:
>786_bases TTGACCGCCGGGCCCGCCGCGCGGGCTCCCGCCCTTTGCGCGCGCCGCGCGACAAGTCTCCCGCGCCGAACTATCCTGTC AACAGCATGTCAGCGTACTGCATCCCAAACAGAGGAAACCATGATGAGATTGTCCGTACTGACGCTTTGCTGCGCCCTGG GATTGAGCCTGCCGGCCTGGGCCGACACCGCCGACAACCTGTTCACCGTGCCGCTGGACGCCTTCCAGCCCGGGAAGATG GTGCCGGGCCAGCGCGTGTACCAGAAGCCAGGGGTCGAGCTGAAGGCCTACCATTCGGTGCTGCTGGAGCCGCTGCTGTT TCTGCGCCAGTCGGAAGACGGCAGTTGGGAATTGCTGCAGGCGGGAGACGAGAACGCGATCGTCAACTATTTCCACGACC GCATGCAGGCGGAGCTGAAAGCCGCCGGCGTGCCGGAGGCGCTGCAGCCGGCGCCGGGCGTCGCCCGCATGCGAGTGGCC GTGACCGGTCTGAGCCAGGACAGGCCGGGCGTCAATGCCGCCGACCTGCTGCCGGTGAAGGCGGTGTTCAACCTGGCCCG CCTGGCCGCCGGCAAGGAGCCTTATCTGCTGAAGATAGCCAGCATGGCGCAGCTGGAGGACGCCCAGGACGGCAGCCTGC TGGCCGGCACCGTCAACCTGCGCCAGAGCGACAAGAACAAGACCAAGGAACAGCCGATGACGCTGGAGCTGGTCAAGCCG CTGATCGACGAGTGGTGCCGCCAGAGCGCGCGCCAGCTGGCCGCGCATCTAGGCAAGGCGCCGTGA
Upstream 100 bases:
>100_bases ATGACAAACTGCATTTCGAACCGCTGCAGGAGGAACTGCTCCTCAACCTGATGGTGGTGGCCTGCATCCTGCTGCTGGCG CTGTACACCTACCTCAACCG
Downstream 100 bases:
>100_bases CTCAGAGCGCCTTGCGCATGAAGACGCTGTGCGGGTCGTCCGGGTAGTCGCCGAACGGCGGGCAGAAATCGTAGCCGGCG CGCTGGTATAGCCGAATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTAGPAARAPALCARRATSLPRRTILSTACQRTASQTEETMMRLSVLTLCCALGLSLPAWADTADNLFTVPLDAFQPGKM VPGQRVYQKPGVELKAYHSVLLEPLLFLRQSEDGSWELLQAGDENAIVNYFHDRMQAELKAAGVPEALQPAPGVARMRVA VTGLSQDRPGVNAADLLPVKAVFNLARLAAGKEPYLLKIASMAQLEDAQDGSLLAGTVNLRQSDKNKTKEQPMTLELVKP LIDEWCRQSARQLAAHLGKAP
Sequences:
>Translated_261_residues MTAGPAARAPALCARRATSLPRRTILSTACQRTASQTEETMMRLSVLTLCCALGLSLPAWADTADNLFTVPLDAFQPGKM VPGQRVYQKPGVELKAYHSVLLEPLLFLRQSEDGSWELLQAGDENAIVNYFHDRMQAELKAAGVPEALQPAPGVARMRVA VTGLSQDRPGVNAADLLPVKAVFNLARLAAGKEPYLLKIASMAQLEDAQDGSLLAGTVNLRQSDKNKTKEQPMTLELVKP LIDEWCRQSARQLAAHLGKAP >Mature_260_residues TAGPAARAPALCARRATSLPRRTILSTACQRTASQTEETMMRLSVLTLCCALGLSLPAWADTADNLFTVPLDAFQPGKMV PGQRVYQKPGVELKAYHSVLLEPLLFLRQSEDGSWELLQAGDENAIVNYFHDRMQAELKAAGVPEALQPAPGVARMRVAV TGLSQDRPGVNAADLLPVKAVFNLARLAAGKEPYLLKIASMAQLEDAQDGSLLAGTVNLRQSDKNKTKEQPMTLELVKPL IDEWCRQSARQLAAHLGKAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28251; Mature: 28120
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGPAARAPALCARRATSLPRRTILSTACQRTASQTEETMMRLSVLTLCCALGLSLPAW CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ADTADNLFTVPLDAFQPGKMVPGQRVYQKPGVELKAYHSVLLEPLLFLRQSEDGSWELLQ CCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE AGDENAIVNYFHDRMQAELKAAGVPEALQPAPGVARMRVAVTGLSQDRPGVNAADLLPVK CCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHEEECCCCCCCCCCHHHHHHHH AVFNLARLAAGKEPYLLKIASMAQLEDAQDGSLLAGTVNLRQSDKNKTKEQPMTLELVKP HHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHH LIDEWCRQSARQLAAHLGKAP HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAGPAARAPALCARRATSLPRRTILSTACQRTASQTEETMMRLSVLTLCCALGLSLPAW CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ADTADNLFTVPLDAFQPGKMVPGQRVYQKPGVELKAYHSVLLEPLLFLRQSEDGSWELLQ CCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE AGDENAIVNYFHDRMQAELKAAGVPEALQPAPGVARMRVAVTGLSQDRPGVNAADLLPVK CCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHEEECCCCCCCCCCHHHHHHHH AVFNLARLAAGKEPYLLKIASMAQLEDAQDGSLLAGTVNLRQSDKNKTKEQPMTLELVKP HHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHH LIDEWCRQSARQLAAHLGKAP HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA