| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498393
Identifier: 34498393
GI number: 34498393
Start: 3214570
End: 3215430
Strand: Reverse
Name: 34498393
Synonym: CV_2938
Alternate gene names: NA
Gene position: 3215430-3214570 (Counterclockwise)
Preceding gene: 34498395
Following gene: 34498392
Centisome position: 67.68
GC content: 63.3
Gene sequence:
>861_bases ATGATCCGTCAAACTCTGATCGCCGCCGCTCTCGCCGCCGCCGGTTTCGCCCATGCGGGCGACCTGAAACTGTCGGTGTA CAACGCCGATGGCAACAGCTTCAACGTTTCTTCCGTGCTGGTCACCGGCGACAAGGACGCCGTGCTGATCGACACCGGCT TCACCCGCGCCGACGCCTACCGCATCGCCGCCAAGGTGCTGGACAGCGGCAAGAACCTGAAGACCATCTACGTCAGCCAG GCCGATCCGGACTACTACTTCGGCGCCTCGGTGCTGAAACAGATCTTCCCCAAGGCCGAACTGGTGGCCGCGCCGGAAGT GCTGGCCCACATCAAGGGCAATGTGAAGGGCAAGGTGGCGTTCTGGGGCCCGAAGATGGGCGCCAACGCGCCGCAGGCCA ACCCGTTGCTGCCGACCGCGCTGAAGGCTGACAAGATCATGCTGGAAGGCAAGGCGCTGGAACTGCGCGACACCCAGGGC GTGATGGCTCACCGCGGCTATATGTGGATTCCGTCCATCCGCGCCATCGTCGGCAATGTCGGCATCTACTCCGGCATGCA TGTCTGGACCGCCGACACCCAGAACGACGCCGAACGCAAGGGCTGGTACAAGCAGCTGGACGACATGGAGGCGCTGAAGC CGGAAGTGGTAGTGCCGGGCCACATGATCGCCGGCGACAAGATGGACGTGTCCGCCATCCGCTACACCCGCGACTATCTG AAAACCTTTGAGGCCAAGAACGCCGAAACCCGCAACAGCGGCGAGCTGATCGAGGCGATGAAGCAGGCCTACCCGAATGC GGCCGAAGTCTCCACGCTGGAGCTGGGCGCCAAGGTGCGCAAGGGCGAGATGAAGTGGTAA
Upstream 100 bases:
>100_bases ATTTATTGGATCGATTATTGCGCTTATAGTGTGCGCATCCTCACTGAAACGCAGTGCAACCCGCCGGCGGGCGCCGGCAT TTAGACCAAGGAGTCACCTT
Downstream 100 bases:
>100_bases CAAGCATGAAACTGCATTATTTCTACGATCCGCTGTGCGGCTGGTGCTACGGCGCCTCTCCGCTGCTGCAGGCGGTGGCC GCATTGCCGGGCGTCAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Including Glyoxylase; Metallo-Beta-Lactamase; Beta-Lactamase Class B; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Protein; Signal Peptide; Beta-Lactamase-Like Protein; Beta-Lactamase; Exported Metallo-Beta-Lactamase Superfamily Protein; Hydrolase
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MIRQTLIAAALAAAGFAHAGDLKLSVYNADGNSFNVSSVLVTGDKDAVLIDTGFTRADAYRIAAKVLDSGKNLKTIYVSQ ADPDYYFGASVLKQIFPKAELVAAPEVLAHIKGNVKGKVAFWGPKMGANAPQANPLLPTALKADKIMLEGKALELRDTQG VMAHRGYMWIPSIRAIVGNVGIYSGMHVWTADTQNDAERKGWYKQLDDMEALKPEVVVPGHMIAGDKMDVSAIRYTRDYL KTFEAKNAETRNSGELIEAMKQAYPNAAEVSTLELGAKVRKGEMKW
Sequences:
>Translated_286_residues MIRQTLIAAALAAAGFAHAGDLKLSVYNADGNSFNVSSVLVTGDKDAVLIDTGFTRADAYRIAAKVLDSGKNLKTIYVSQ ADPDYYFGASVLKQIFPKAELVAAPEVLAHIKGNVKGKVAFWGPKMGANAPQANPLLPTALKADKIMLEGKALELRDTQG VMAHRGYMWIPSIRAIVGNVGIYSGMHVWTADTQNDAERKGWYKQLDDMEALKPEVVVPGHMIAGDKMDVSAIRYTRDYL KTFEAKNAETRNSGELIEAMKQAYPNAAEVSTLELGAKVRKGEMKW >Mature_286_residues MIRQTLIAAALAAAGFAHAGDLKLSVYNADGNSFNVSSVLVTGDKDAVLIDTGFTRADAYRIAAKVLDSGKNLKTIYVSQ ADPDYYFGASVLKQIFPKAELVAAPEVLAHIKGNVKGKVAFWGPKMGANAPQANPLLPTALKADKIMLEGKALELRDTQG VMAHRGYMWIPSIRAIVGNVGIYSGMHVWTADTQNDAERKGWYKQLDDMEALKPEVVVPGHMIAGDKMDVSAIRYTRDYL KTFEAKNAETRNSGELIEAMKQAYPNAAEVSTLELGAKVRKGEMKW
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31106; Mature: 31106
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRQTLIAAALAAAGFAHAGDLKLSVYNADGNSFNVSSVLVTGDKDAVLIDTGFTRADAY CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEEECCCCHHHHH RIAAKVLDSGKNLKTIYVSQADPDYYFGASVLKQIFPKAELVAAPEVLAHIKGNVKGKVA HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEE FWGPKMGANAPQANPLLPTALKADKIMLEGKALELRDTQGVMAHRGYMWIPSIRAIVGNV EECCCCCCCCCCCCCCCCCHHCCCEEEECCCEEEEECCCCHHHHCCEEECCHHHHHHHCC GIYSGMHVWTADTQNDAERKGWYKQLDDMEALKPEVVVPGHMIAGDKMDVSAIRYTRDYL CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCHHHHHHHHHHH KTFEAKNAETRNSGELIEAMKQAYPNAAEVSTLELGAKVRKGEMKW HHHHCCCCCCCCCHHHHHHHHHHCCCHHHEEHHHHCCHHCCCCCCC >Mature Secondary Structure MIRQTLIAAALAAAGFAHAGDLKLSVYNADGNSFNVSSVLVTGDKDAVLIDTGFTRADAY CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEEECCCCHHHHH RIAAKVLDSGKNLKTIYVSQADPDYYFGASVLKQIFPKAELVAAPEVLAHIKGNVKGKVA HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEE FWGPKMGANAPQANPLLPTALKADKIMLEGKALELRDTQGVMAHRGYMWIPSIRAIVGNV EECCCCCCCCCCCCCCCCCHHCCCEEEECCCEEEEECCCCHHHHCCEEECCHHHHHHHCC GIYSGMHVWTADTQNDAERKGWYKQLDDMEALKPEVVVPGHMIAGDKMDVSAIRYTRDYL CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCHHHHHHHHHHH KTFEAKNAETRNSGELIEAMKQAYPNAAEVSTLELGAKVRKGEMKW HHHHCCCCCCCCCHHHHHHHHHHCCCHHHEEHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA