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The map label for this gene is qmcA [H]

Identifier: 34498383

GI number: 34498383

Start: 3207067

End: 3208008

Strand: Direct

Name: qmcA [H]

Synonym: CV_2928

Alternate gene names: 34498383

Gene position: 3207067-3208008 (Clockwise)

Preceding gene: 34498382

Following gene: 34498384

Centisome position: 67.5

GC content: 63.59

Gene sequence:

>942_bases
ATGGAAATCGCCCTGATCCTGTTCGTGGCCGTCGTCATCTTCATTTTCAAATCGCTGGCGGTGGTGCCGCAGCAGCACGC
CTACATCGTCGAGCGCCTGGGCCGCTACCACGCCACGCTGACGCCGGGCCTCAACATCATCACCCCCTTCATCGACCGCA
TCGCCTACAAGCACAGCCTGAAGGAAATCCCGCTGGACGTGCCCAGCCAGATCTGCATCACCCGCGACAACACCCAGCTG
AAGGTGGACGGCATCCTCTACTTCCAGGTGACCGACGCCAAGCTAGCCTCCTACGGCACCAGCAACTACATCGTCGCCAT
CACCCAGCTGTCGCAGACCACGCTGCGCTCGGTCATCGGCAAGCTGGAGCTGGACAAAACGTTTGAAGAGCGCGACGACA
TCAACCGCAGCGTGGTGGCCTCGCTGGACGAAGCCGCGATCAACTGGGGCGTCAAGGTGCTGCGCTACGAGATCAAGGAC
CTGGTGCCGCCGCAGGACATCCTGCACGCGATGCAGGCGCAGATCACCGCCGAGCGCGAGAAACGCGCCCGCATCGCCCA
GTCCGAAGGCGTGAAGGTGGAGCAGATCAACCTGGCTACCGGTGCCCGCGAGGCGGCGATCCAGAAGTCCCAGGGCGAGA
TGCAGGCCACCATCAACAACTCCGAGGGCGGCAAGCAGGCCGCGATCAACCAGGCGATGGGCGAAGCCGAGGCGATCCGG
CTGGTGGCGGACGCCACCGCCGACGCGATCAACCGCATCGCCGGCGCCGTCCGCACCGAAGGCGGCCTGGAGGCGGTCAA
CCTGAAAGTCGCCGAGCAATACATCGCCGCCTTCGGCAAATTGGCCAAGGAAAACAATACCATCATCATGCCGAGCAACG
TCGCAGACGTCGGCGGGCTGGTGGCCAGCGCGCTCAGCGTGGTCAAACAAACTAACCGTTAA

Upstream 100 bases:

>100_bases
GGACAGCCGGCTGGACGCGGGAAGCACCGGCTACATTTCCGGCCGCGAAGGCAATCTGTTCAAGATCTCGTCACAACAAC
CGCAATAAAGAGAAAAACCC

Downstream 100 bases:

>100_bases
TCCCTTTGAAAGCCCCGGCGCGGCTTGAATCTGGCCGCGCCAGCCCCCATAATCACCCGCATGAAATTTTTTACCGATCT
CCTTCCCGTCCTGCTGTTCT

Product: stomatin/Mec-2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MEIALILFVAVVIFIFKSLAVVPQQHAYIVERLGRYHATLTPGLNIITPFIDRIAYKHSLKEIPLDVPSQICITRDNTQL
KVDGILYFQVTDAKLASYGTSNYIVAITQLSQTTLRSVIGKLELDKTFEERDDINRSVVASLDEAAINWGVKVLRYEIKD
LVPPQDILHAMQAQITAEREKRARIAQSEGVKVEQINLATGAREAAIQKSQGEMQATINNSEGGKQAAINQAMGEAEAIR
LVADATADAINRIAGAVRTEGGLEAVNLKVAEQYIAAFGKLAKENNTIIMPSNVADVGGLVASALSVVKQTNR

Sequences:

>Translated_313_residues
MEIALILFVAVVIFIFKSLAVVPQQHAYIVERLGRYHATLTPGLNIITPFIDRIAYKHSLKEIPLDVPSQICITRDNTQL
KVDGILYFQVTDAKLASYGTSNYIVAITQLSQTTLRSVIGKLELDKTFEERDDINRSVVASLDEAAINWGVKVLRYEIKD
LVPPQDILHAMQAQITAEREKRARIAQSEGVKVEQINLATGAREAAIQKSQGEMQATINNSEGGKQAAINQAMGEAEAIR
LVADATADAINRIAGAVRTEGGLEAVNLKVAEQYIAAFGKLAKENNTIIMPSNVADVGGLVASALSVVKQTNR
>Mature_313_residues
MEIALILFVAVVIFIFKSLAVVPQQHAYIVERLGRYHATLTPGLNIITPFIDRIAYKHSLKEIPLDVPSQICITRDNTQL
KVDGILYFQVTDAKLASYGTSNYIVAITQLSQTTLRSVIGKLELDKTFEERDDINRSVVASLDEAAINWGVKVLRYEIKD
LVPPQDILHAMQAQITAEREKRARIAQSEGVKVEQINLATGAREAAIQKSQGEMQATINNSEGGKQAAINQAMGEAEAIR
LVADATADAINRIAGAVRTEGGLEAVNLKVAEQYIAAFGKLAKENNTIIMPSNVADVGGLVASALSVVKQTNR

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=297, Percent_Identity=48.1481481481481, Blast_Score=262, Evalue=4e-70,
Organism=Homo sapiens, GI38016911, Length=167, Percent_Identity=33.5329341317365, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI221316744, Length=188, Percent_Identity=33.5106382978723, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI21686995, Length=188, Percent_Identity=33.5106382978723, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI7657615, Length=186, Percent_Identity=27.4193548387097, Blast_Score=75, Evalue=5e-14,
Organism=Escherichia coli, GI1786697, Length=311, Percent_Identity=38.2636655948553, Blast_Score=216, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI32564147, Length=289, Percent_Identity=46.3667820069204, Blast_Score=269, Evalue=1e-72,
Organism=Caenorhabditis elegans, GI17569493, Length=212, Percent_Identity=32.0754716981132, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI193209764, Length=212, Percent_Identity=32.0754716981132, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17569497, Length=190, Percent_Identity=32.1052631578947, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17570459, Length=197, Percent_Identity=32.48730964467, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17569499, Length=162, Percent_Identity=32.7160493827161, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71989955, Length=159, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71989948, Length=159, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71987612, Length=162, Percent_Identity=30.8641975308642, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25153583, Length=162, Percent_Identity=30.8641975308642, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71987621, Length=162, Percent_Identity=30.8641975308642, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193210507, Length=210, Percent_Identity=30.952380952381, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17570161, Length=210, Percent_Identity=30.952380952381, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI32566490, Length=167, Percent_Identity=29.3413173652695, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI45550506, Length=286, Percent_Identity=50, Blast_Score=263, Evalue=1e-70,
Organism=Drosophila melanogaster, GI45556022, Length=159, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI18860517, Length=203, Percent_Identity=33.9901477832512, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI62484448, Length=170, Percent_Identity=33.5294117647059, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281365664, Length=170, Percent_Identity=33.5294117647059, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI62484274, Length=170, Percent_Identity=33.5294117647059, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24657857, Length=169, Percent_Identity=33.1360946745562, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI281361631, Length=203, Percent_Identity=29.064039408867, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI281361633, Length=203, Percent_Identity=29.064039408867, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28573263, Length=210, Percent_Identity=27.1428571428571, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI21356845, Length=189, Percent_Identity=23.8095238095238, Blast_Score=68, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34079; Mature: 34079

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIALILFVAVVIFIFKSLAVVPQQHAYIVERLGRYHATLTPGLNIITPFIDRIAYKHSL
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH
KEIPLDVPSQICITRDNTQLKVDGILYFQVTDAKLASYGTSNYIVAITQLSQTTLRSVIG
HHCCCCCCCCEEEECCCCEEEEEEEEEEEEECCHHHHCCCCCEEEEEEHHHHHHHHHHHH
KLELDKTFEERDDINRSVVASLDEAAINWGVKVLRYEIKDLVPPQDILHAMQAQITAERE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KRARIAQSEGVKVEQINLATGAREAAIQKSQGEMQATINNSEGGKQAAINQAMGEAEAIR
HHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCHHHHHH
LVADATADAINRIAGAVRTEGGLEAVNLKVAEQYIAAFGKLAKENNTIIMPSNVADVGGL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
VASALSVVKQTNR
HHHHHHHHHHCCC
>Mature Secondary Structure
MEIALILFVAVVIFIFKSLAVVPQQHAYIVERLGRYHATLTPGLNIITPFIDRIAYKHSL
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH
KEIPLDVPSQICITRDNTQLKVDGILYFQVTDAKLASYGTSNYIVAITQLSQTTLRSVIG
HHCCCCCCCCEEEECCCCEEEEEEEEEEEEECCHHHHCCCCCEEEEEEHHHHHHHHHHHH
KLELDKTFEERDDINRSVVASLDEAAINWGVKVLRYEIKDLVPPQDILHAMQAQITAERE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KRARIAQSEGVKVEQINLATGAREAAIQKSQGEMQATINNSEGGKQAAINQAMGEAEAIR
HHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCHHHHHH
LVADATADAINRIAGAVRTEGGLEAVNLKVAEQYIAAFGKLAKENNTIIMPSNVADVGGL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
VASALSVVKQTNR
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]