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The map label for this gene is ybfF [C]

Identifier: 34498375

GI number: 34498375

Start: 3200729

End: 3201457

Strand: Direct

Name: ybfF [C]

Synonym: CV_2920

Alternate gene names: 34498375

Gene position: 3200729-3201457 (Clockwise)

Preceding gene: 34498374

Following gene: 34498376

Centisome position: 67.37

GC content: 68.31

Gene sequence:

>729_bases
ATGCTGCGCTATCACGACATTCCCGGCCACGGCGCGCCGCTCATCATGCTGCACGGCCTGGGCTGCGCCTCCTCGTTCGA
TTATCCCCGCCTGCTGGCCGAACCGGGTCTCGCCAGGCGCCGCGCGCTATTGGTGGATTTGCTGGGCCACGGCTTCAGCG
ACAAGCCGGAAGATTTCAGCTACGCCCCCGGCGCCCAGGCTGAAGCGCTGGGGCAATGGATCGAACAACTGGGCTTGCGC
GAATTCGATCTGTACGGCCACAGCATGGGCGGCAGCGTCGCCATCGAACTGGCCACGCTATTGCCTGACCGAATCCGGCG
CCTGGTATTGGCCGAGCCGAATCTGGACAGCGGCGGCGGCGCCTACAGCCGCGCGCTGGCAAGCTGGAGCGAGCCCGACT
ACGTCGCCCGCGGCCATCGGGAAATCATTCGGACCTTCGGCGCGGACAATCCCAACTGGGCCGGCAGCATGGCCGTCGCC
TCGCCGCTAGCCGTGCACAGGGCGGCCAAGGGCCTGATCGCGGGCAGCGCAGTCAGCTGGCGCGAGCAGCTGCGGGCCTT
GTCCATGCCGCGCCGCATCATCTTCGGCGAAAAATCGCTGCCCGATCCCGACCTCGAATGGCTGCCCCGGCATGGCATCG
CCGCCAGCATCGTGGCCGACGCCGGCCACTCGCTGGCCTGGGACAATCCCGCCGGCCTTGCCGAGGCGATTGCCGCCGCG
CTGGATTGA

Upstream 100 bases:

>100_bases
ACCCACATCAGCGGCCTGAAGCGACATGAATACCGGAAAATTTCAAACTCCTCACGCTGAATCCATCATGCAATATTTCG
CGCTTTCCCAGCCGCAAGCC

Downstream 100 bases:

>100_bases
GAATGATGCTTTGACCAATTTCAACGCCGAGGCTATGCTGCAAGCCTGATGTTACGTTAACGTAAGATGAATCATGCTCT
ACTTCGAAGACCTTAGGCCC

Product: hydrolase

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold; Alpha/Beta Fold Family Hydrolase; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Hydrolase Alpha/Beta Fold Family Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MLRYHDIPGHGAPLIMLHGLGCASSFDYPRLLAEPGLARRRALLVDLLGHGFSDKPEDFSYAPGAQAEALGQWIEQLGLR
EFDLYGHSMGGSVAIELATLLPDRIRRLVLAEPNLDSGGGAYSRALASWSEPDYVARGHREIIRTFGADNPNWAGSMAVA
SPLAVHRAAKGLIAGSAVSWREQLRALSMPRRIIFGEKSLPDPDLEWLPRHGIAASIVADAGHSLAWDNPAGLAEAIAAA
LD

Sequences:

>Translated_242_residues
MLRYHDIPGHGAPLIMLHGLGCASSFDYPRLLAEPGLARRRALLVDLLGHGFSDKPEDFSYAPGAQAEALGQWIEQLGLR
EFDLYGHSMGGSVAIELATLLPDRIRRLVLAEPNLDSGGGAYSRALASWSEPDYVARGHREIIRTFGADNPNWAGSMAVA
SPLAVHRAAKGLIAGSAVSWREQLRALSMPRRIIFGEKSLPDPDLEWLPRHGIAASIVADAGHSLAWDNPAGLAEAIAAA
LD
>Mature_242_residues
MLRYHDIPGHGAPLIMLHGLGCASSFDYPRLLAEPGLARRRALLVDLLGHGFSDKPEDFSYAPGAQAEALGQWIEQLGLR
EFDLYGHSMGGSVAIELATLLPDRIRRLVLAEPNLDSGGGAYSRALASWSEPDYVARGHREIIRTFGADNPNWAGSMAVA
SPLAVHRAAKGLIAGSAVSWREQLRALSMPRRIIFGEKSLPDPDLEWLPRHGIAASIVADAGHSLAWDNPAGLAEAIAAA
LD

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.-.- [C]

Molecular weight: Translated: 25982; Mature: 25982

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYHDIPGHGAPLIMLHGLGCASSFDYPRLLAEPGLARRRALLVDLLGHGFSDKPEDFS
CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
YAPGAQAEALGQWIEQLGLREFDLYGHSMGGSVAIELATLLPDRIRRLVLAEPNLDSGGG
CCCCCHHHHHHHHHHHHCCEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AYSRALASWSEPDYVARGHREIIRTFGADNPNWAGSMAVASPLAVHRAAKGLIAGSAVSW
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
REQLRALSMPRRIIFGEKSLPDPDLEWLPRHGIAASIVADAGHSLAWDNPAGLAEAIAAA
HHHHHHHCCCHHEEECCCCCCCCCHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHH
LD
CC
>Mature Secondary Structure
MLRYHDIPGHGAPLIMLHGLGCASSFDYPRLLAEPGLARRRALLVDLLGHGFSDKPEDFS
CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
YAPGAQAEALGQWIEQLGLREFDLYGHSMGGSVAIELATLLPDRIRRLVLAEPNLDSGGG
CCCCCHHHHHHHHHHHHCCEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AYSRALASWSEPDYVARGHREIIRTFGADNPNWAGSMAVASPLAVHRAAKGLIAGSAVSW
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
REQLRALSMPRRIIFGEKSLPDPDLEWLPRHGIAASIVADAGHSLAWDNPAGLAEAIAAA
HHHHHHHCCCHHEEECCCCCCCCCHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHH
LD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA