Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is flgK1 [H]

Identifier: 34498334

GI number: 34498334

Start: 3155172

End: 3156959

Strand: Reverse

Name: flgK1 [H]

Synonym: CV_2879

Alternate gene names: 34498334

Gene position: 3156959-3155172 (Counterclockwise)

Preceding gene: 34498335

Following gene: 34498333

Centisome position: 66.45

GC content: 61.13

Gene sequence:

>1788_bases
ATGGCTATCATCGGAGCGGACGTCTTTGGCATCGGCCTGAGCGGACTGAATGTCGCGCAAAACGCCTTGTCGGTGACCAG
CAACAACATATCCAACGTCAATACCCCCGGCTACAACGCCCAGTACATGACGCAGGCCGGGCGTACGCCCGTGAACGCGG
GCTTCGGCTACCTGGGGCAGGGCGTGGACGCGACCAGCGTGATGCGCACCTACAACCAGTACCTGGTCACCCAGATGCAG
ACCGCGCAAACTAACAGCAGCTACTACACGACCCAGTCACAGCAGCTGCAGCAGGTTGCCAACATGATCCAGAACAGCAC
GCAAAGCGTGAGCCCGGCGATCCAGTCGTTCTTCGGCGCGATGCAGACTCTGACCCAGCAGCCTAACTCCACCGCCAGCC
GCCAGGCGGTGCTGGGCATGGCCCAGGCGCTGGCCACCTCCATGACCTCGATGAATTCGCAGCTGCAGCAGATTCAGCAG
GGGGTGAACAACCAGATCAGCAGCTCCGTGCAGAGCATCAATGCGCTGGCGCAGCAGATCGCCAACCTTAACCAGCAGAT
CGGCGCCGCCACCGGGGGCAATCCCAACGGCGCCCAGCCGAATACGCTGCTGGATCAGCGCGACCAGGCGGTGACGCAGC
TGAACCAGCTGGTCGGCGCCACCATCAACAAGAACAGCGACGGTTCGTACAATGTCAGCATCGGCAGCGGCCAGCCCTTG
GTCGTCGGCACGACGACCTTTTCGCTGCAGACTCAGCAGGACCCCAACAACCCGGCCAACTACCTGATAGGGCTGGCCGG
GCCGAACAACTCGCTGACCATGTTGCCGAACAACATCATGAACGGCGGGCAGCTGTCGGGGCTGCTGAATTTCCGCGACG
GTCCGCTGGTGCAGACGCAAAAACAGCTGGGCACCCTGGCGATCAATTTGTCCGCGGCGATGAACTATCAGAACTCGCTG
GGCATGGACCTGAACGGCAACACCCCTGGCGCGGCGATCTTCCAGGACTTGTCGAAGTACGTCAACAACCCCCAGTATGC
GGCGGGCCAGTTCGGGGTGGTGATGTCCGATCCTTCGCAGCTCGCTTGCGCGTCCAATCTGGCGCCGACCGGCGGCGCGG
GCGGCAGCGGCGTGACGATGAGCGGCGTGTGGTCCAATCTGCCGGGCACGTACCAGACCGATATCAACAAGACTCCACCG
GTGCTGGATTCCGTCACCCAGCACCCGTCGTATCAGCTGACCGGCATGACCGTCACGGCGTCGGCGACCTCGCCGATCAC
CATGACGGCCACCATCACCGGCACCAATGGCGGCGGACCGTACAATGTGGTCGTCGATCCGACTCTGCCGAACAGTTACA
AATTGCAGACCACGGCGGTGCCGCCGGTGGATGTCGGCATCGGCTTTCAATTGTCCGGGGTGCCTGCGACGAACCAGACT
TTTACCGTGGGCCCCGCAACCAGCACCAAGAATTCCGGCGACAGCAACAATCTGCGCCAGATGACCGCGCAGCAGAATAT
CAATCTGGTGAACGGGCAGTCCTACCAGGGCTTTTACTCGACGATGGTGGCATCGGTGGGCAATGCCACCAATACGGTGA
ATCTGCAGAATCAGACCGCGCAGACGACGCTGCAGGAAGCGCAGAAAAACAATTCCAATGCCTCCGGCGTGAACCTGGAC
CAAGAAGCCGCGAATCTGATCAAGTACCAGCAGTCATACCAAGCATGCAGCAAGGTGATACAGATTGCGCAGAGCACGTT
CAGCACAATCCTGAACGCCTTGTCCTGA

Upstream 100 bases:

>100_bases
GCGCAAACTGGTCGACGTGGCGGCGAGCCTGGCGCAACAAGTGGCCAGGACTTGATCAAGCTTTGGCGAAAACGGTCGAT
AAAGGCTTAGAGAGGTAATC

Downstream 100 bases:

>100_bases
TTTGGTGAAGGAGCACGAATATGCGCATCAGTTCAAACACCCTATACCAGTCCGGCGTCAATAATATGTCGGCGCTGCAG
TCGGATCTGCTTCAACTTAA

Product: flagellar hook-associated protein 1

Products: NA

Alternate protein names: HAP1 [H]

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MAIIGADVFGIGLSGLNVAQNALSVTSNNISNVNTPGYNAQYMTQAGRTPVNAGFGYLGQGVDATSVMRTYNQYLVTQMQ
TAQTNSSYYTTQSQQLQQVANMIQNSTQSVSPAIQSFFGAMQTLTQQPNSTASRQAVLGMAQALATSMTSMNSQLQQIQQ
GVNNQISSSVQSINALAQQIANLNQQIGAATGGNPNGAQPNTLLDQRDQAVTQLNQLVGATINKNSDGSYNVSIGSGQPL
VVGTTTFSLQTQQDPNNPANYLIGLAGPNNSLTMLPNNIMNGGQLSGLLNFRDGPLVQTQKQLGTLAINLSAAMNYQNSL
GMDLNGNTPGAAIFQDLSKYVNNPQYAAGQFGVVMSDPSQLACASNLAPTGGAGGSGVTMSGVWSNLPGTYQTDINKTPP
VLDSVTQHPSYQLTGMTVTASATSPITMTATITGTNGGGPYNVVVDPTLPNSYKLQTTAVPPVDVGIGFQLSGVPATNQT
FTVGPATSTKNSGDSNNLRQMTAQQNINLVNGQSYQGFYSTMVASVGNATNTVNLQNQTAQTTLQEAQKNNSNASGVNLD
QEAANLIKYQQSYQACSKVIQIAQSTFSTILNALS

Sequences:

>Translated_595_residues
MAIIGADVFGIGLSGLNVAQNALSVTSNNISNVNTPGYNAQYMTQAGRTPVNAGFGYLGQGVDATSVMRTYNQYLVTQMQ
TAQTNSSYYTTQSQQLQQVANMIQNSTQSVSPAIQSFFGAMQTLTQQPNSTASRQAVLGMAQALATSMTSMNSQLQQIQQ
GVNNQISSSVQSINALAQQIANLNQQIGAATGGNPNGAQPNTLLDQRDQAVTQLNQLVGATINKNSDGSYNVSIGSGQPL
VVGTTTFSLQTQQDPNNPANYLIGLAGPNNSLTMLPNNIMNGGQLSGLLNFRDGPLVQTQKQLGTLAINLSAAMNYQNSL
GMDLNGNTPGAAIFQDLSKYVNNPQYAAGQFGVVMSDPSQLACASNLAPTGGAGGSGVTMSGVWSNLPGTYQTDINKTPP
VLDSVTQHPSYQLTGMTVTASATSPITMTATITGTNGGGPYNVVVDPTLPNSYKLQTTAVPPVDVGIGFQLSGVPATNQT
FTVGPATSTKNSGDSNNLRQMTAQQNINLVNGQSYQGFYSTMVASVGNATNTVNLQNQTAQTTLQEAQKNNSNASGVNLD
QEAANLIKYQQSYQACSKVIQIAQSTFSTILNALS
>Mature_594_residues
AIIGADVFGIGLSGLNVAQNALSVTSNNISNVNTPGYNAQYMTQAGRTPVNAGFGYLGQGVDATSVMRTYNQYLVTQMQT
AQTNSSYYTTQSQQLQQVANMIQNSTQSVSPAIQSFFGAMQTLTQQPNSTASRQAVLGMAQALATSMTSMNSQLQQIQQG
VNNQISSSVQSINALAQQIANLNQQIGAATGGNPNGAQPNTLLDQRDQAVTQLNQLVGATINKNSDGSYNVSIGSGQPLV
VGTTTFSLQTQQDPNNPANYLIGLAGPNNSLTMLPNNIMNGGQLSGLLNFRDGPLVQTQKQLGTLAINLSAAMNYQNSLG
MDLNGNTPGAAIFQDLSKYVNNPQYAAGQFGVVMSDPSQLACASNLAPTGGAGGSGVTMSGVWSNLPGTYQTDINKTPPV
LDSVTQHPSYQLTGMTVTASATSPITMTATITGTNGGGPYNVVVDPTLPNSYKLQTTAVPPVDVGIGFQLSGVPATNQTF
TVGPATSTKNSGDSNNLRQMTAQQNINLVNGQSYQGFYSTMVASVGNATNTVNLQNQTAQTTLQEAQKNNSNASGVNLDQ
EAANLIKYQQSYQACSKVIQIAQSTFSTILNALS

Specific function: Unknown

COG id: COG1256

COG function: function code N; Flagellar hook-associated protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787323, Length=595, Percent_Identity=31.4285714285714, Blast_Score=231, Evalue=9e-62,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR002371 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 62152; Mature: 62021

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIGADVFGIGLSGLNVAQNALSVTSNNISNVNTPGYNAQYMTQAGRTPVNAGFGYLGQ
CEEEECCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHCC
GVDATSVMRTYNQYLVTQMQTAQTNSSYYTTQSQQLQQVANMIQNSTQSVSPAIQSFFGA
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
MQTLTQQPNSTASRQAVLGMAQALATSMTSMNSQLQQIQQGVNNQISSSVQSINALAQQI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANLNQQIGAATGGNPNGAQPNTLLDQRDQAVTQLNQLVGATINKNSDGSYNVSIGSGQPL
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEE
VVGTTTFSLQTQQDPNNPANYLIGLAGPNNSLTMLPNNIMNGGQLSGLLNFRDGPLVQTQ
EEEEEEEEEEECCCCCCCCCEEEEEECCCCCEEECCHHHCCCCCEEEEEECCCCCCHHHH
KQLGTLAINLSAAMNYQNSLGMDLNGNTPGAAIFQDLSKYVNNPQYAAGQFGVVMSDPSQ
HHHCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHH
LACASNLAPTGGAGGSGVTMSGVWSNLPGTYQTDINKTPPVLDSVTQHPSYQLTGMTVTA
HHHHCCCCCCCCCCCCCCEECCHHCCCCCCEECCCCCCCCHHHHHHCCCCEEEEEEEEEE
SATSPITMTATITGTNGGGPYNVVVDPTLPNSYKLQTTAVPPVDVGIGFQLSGVPATNQT
CCCCCEEEEEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCEECCCEEECCCCCCCCE
FTVGPATSTKNSGDSNNLRQMTAQQNINLVNGQSYQGFYSTMVASVGNATNTVNLQNQTA
EEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCCEEEECCHHH
QTTLQEAQKNNSNASGVNLDQEAANLIKYQQSYQACSKVIQIAQSTFSTILNALS
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIIGADVFGIGLSGLNVAQNALSVTSNNISNVNTPGYNAQYMTQAGRTPVNAGFGYLGQ
EEEECCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHCC
GVDATSVMRTYNQYLVTQMQTAQTNSSYYTTQSQQLQQVANMIQNSTQSVSPAIQSFFGA
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
MQTLTQQPNSTASRQAVLGMAQALATSMTSMNSQLQQIQQGVNNQISSSVQSINALAQQI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANLNQQIGAATGGNPNGAQPNTLLDQRDQAVTQLNQLVGATINKNSDGSYNVSIGSGQPL
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEE
VVGTTTFSLQTQQDPNNPANYLIGLAGPNNSLTMLPNNIMNGGQLSGLLNFRDGPLVQTQ
EEEEEEEEEEECCCCCCCCCEEEEEECCCCCEEECCHHHCCCCCEEEEEECCCCCCHHHH
KQLGTLAINLSAAMNYQNSLGMDLNGNTPGAAIFQDLSKYVNNPQYAAGQFGVVMSDPSQ
HHHCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHH
LACASNLAPTGGAGGSGVTMSGVWSNLPGTYQTDINKTPPVLDSVTQHPSYQLTGMTVTA
HHHHCCCCCCCCCCCCCCEECCHHCCCCCCEECCCCCCCCHHHHHHCCCCEEEEEEEEEE
SATSPITMTATITGTNGGGPYNVVVDPTLPNSYKLQTTAVPPVDVGIGFQLSGVPATNQT
CCCCCEEEEEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCEECCCEEECCCCCCCCE
FTVGPATSTKNSGDSNNLRQMTAQQNINLVNGQSYQGFYSTMVASVGNATNTVNLQNQTA
EEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCCEEEECCHHH
QTTLQEAQKNNSNASGVNLDQEAANLIKYQQSYQACSKVIQIAQSTFSTILNALS
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8158647 [H]