| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yieN [C]
Identifier: 34498193
GI number: 34498193
Start: 2973715
End: 2974830
Strand: Direct
Name: yieN [C]
Synonym: CV_2738
Alternate gene names: 34498193
Gene position: 2973715-2974830 (Clockwise)
Preceding gene: 34498189
Following gene: 34498194
Centisome position: 62.59
GC content: 67.65
Gene sequence:
>1116_bases ATGAATTCGCAGCTGCAGCACGCATCCGCTCAAGTCCGCTCCGCCATCCGCTCCGCTACCCAAGGGCTGGTCGGCAGGGA GCAACTCGCAGAATTGATCATCCTCGCCGCCGTGGCCCAGGAGCACCTGCTGGTAATAGGCCCGCCCGGCACAGCCAAAA GCGCCGTCGTGCGCCGGGTCGCCCAAGCGATGGGCGGCCGTTACTTCGAATACCTGCTTGGCCGCTACACCGAACCTTCC GAGCTGTTCGGCGCGGTAGACCTGCGCAAGCTGCGCGAAGGCACAGTGGAAACCGATACCACCGGCATGCTGCCGGAGGC TGAAGTCGCCTTCCTAGACGAGGTTTTCCTCGGCTCCACCGCCATCCTCAACACCCTGCTGGGCATTCTGAACGAGCGCC GCTTCCGCCGCGGCCACACCCAGCTGCATTGCCCGCTGCGCGTTTGCATAGGCGCGGCCAACGGTTTGCCCGACGATGCC TCGCTGGCGGCCTTTGGCGACCGCTTCCTGCTGCACGCCTTCATCGAAGCCACGGCTGATCATCAGCTGGAAGCGATGCT GGAGGGCGGCTGGCAAGCCGAACAGGCCCCGGCGGCAAGCGAGATCAGCCTGGCGGACATCGATCTGCTGTGCCAGGCGG CGCGCGAAGTGGACATGCGCGCGGTCCGCCCCATGCTGGCGCAGGCTATCCGCCAATTGCGCGGCGCCGGCATCAGCTTG TCCGACCGGCGCATCGTCAAATCCCAGCGCCTGGTCGCCGCCGCCGCCGCGCTCGCCGGACGCATGCGCGCCGACGCCTC CGACCTGTGGCCGCTGCTGTACGCGCTGCCAACCCAGGAAGCCCAGCAGCACGCCCGCGAAATATTGCGCGAGCAGTTGG CGGCTTGCGCCAATGGCGTGCTGGCCAGCGCGGTGGAAACCGCGGCCGTGCAGCCGCTGTCCCGCGTCCAGCGCCTGCTG GAAAACGCGCAATGCGCGCTGGACGCGGAGACAGACCTATCGTCCATCGAAGCCCTGCTGCGCGAGATCGACGCCAACTT CAGCGCCGATGGCATGCCGGACGAGCTGGCCGCTTCGCGCGAAAAACTGGCTGCGCGCCTGGCGGAGCCCGCATGA
Upstream 100 bases:
>100_bases AGAAGACCGCCCACCGATTTGGCACTATTGCCAATATTACAATTGTTAACAATCCATCCCCTTCTCTATAATCTCCCGAT CCACACTTCACGCCAACATC
Downstream 100 bases:
>100_bases GCGGCTCCGCCATCGCTTGGCATTGGCAGCCCGTTCCGGAAAGCGACATTGCCGCCCCGCAGGCGGCGGTCGCCTTCGGC GATGCCGCGGAGCGCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MNSQLQHASAQVRSAIRSATQGLVGREQLAELIILAAVAQEHLLVIGPPGTAKSAVVRRVAQAMGGRYFEYLLGRYTEPS ELFGAVDLRKLREGTVETDTTGMLPEAEVAFLDEVFLGSTAILNTLLGILNERRFRRGHTQLHCPLRVCIGAANGLPDDA SLAAFGDRFLLHAFIEATADHQLEAMLEGGWQAEQAPAASEISLADIDLLCQAAREVDMRAVRPMLAQAIRQLRGAGISL SDRRIVKSQRLVAAAAALAGRMRADASDLWPLLYALPTQEAQQHAREILREQLAACANGVLASAVETAAVQPLSRVQRLL ENAQCALDAETDLSSIEALLREIDANFSADGMPDELAASREKLAARLAEPA
Sequences:
>Translated_371_residues MNSQLQHASAQVRSAIRSATQGLVGREQLAELIILAAVAQEHLLVIGPPGTAKSAVVRRVAQAMGGRYFEYLLGRYTEPS ELFGAVDLRKLREGTVETDTTGMLPEAEVAFLDEVFLGSTAILNTLLGILNERRFRRGHTQLHCPLRVCIGAANGLPDDA SLAAFGDRFLLHAFIEATADHQLEAMLEGGWQAEQAPAASEISLADIDLLCQAAREVDMRAVRPMLAQAIRQLRGAGISL SDRRIVKSQRLVAAAAALAGRMRADASDLWPLLYALPTQEAQQHAREILREQLAACANGVLASAVETAAVQPLSRVQRLL ENAQCALDAETDLSSIEALLREIDANFSADGMPDELAASREKLAARLAEPA >Mature_371_residues MNSQLQHASAQVRSAIRSATQGLVGREQLAELIILAAVAQEHLLVIGPPGTAKSAVVRRVAQAMGGRYFEYLLGRYTEPS ELFGAVDLRKLREGTVETDTTGMLPEAEVAFLDEVFLGSTAILNTLLGILNERRFRRGHTQLHCPLRVCIGAANGLPDDA SLAAFGDRFLLHAFIEATADHQLEAMLEGGWQAEQAPAASEISLADIDLLCQAAREVDMRAVRPMLAQAIRQLRGAGISL SDRRIVKSQRLVAAAAALAGRMRADASDLWPLLYALPTQEAQQHAREILREQLAACANGVLASAVETAAVQPLSRVQRLL ENAQCALDAETDLSSIEALLREIDANFSADGMPDELAASREKLAARLAEPA
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082326, Length=262, Percent_Identity=35.4961832061069, Blast_Score=142, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR001270 [H]
Pfam domain/function: PF07728 AAA_5 [H]
EC number: NA
Molecular weight: Translated: 39938; Mature: 39938
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSQLQHASAQVRSAIRSATQGLVGREQLAELIILAAVAQEHLLVIGPPGTAKSAVVRRV CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHH AQAMGGRYFEYLLGRYTEPSELFGAVDLRKLREGTVETDTTGMLPEAEVAFLDEVFLGST HHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHH AILNTLLGILNERRFRRGHTQLHCPLRVCIGAANGLPDDASLAAFGDRFLLHAFIEATAD HHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH HQLEAMLEGGWQAEQAPAASEISLADIDLLCQAAREVDMRAVRPMLAQAIRQLRGAGISL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SDRRIVKSQRLVAAAAALAGRMRADASDLWPLLYALPTQEAQQHAREILREQLAACANGV CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LASAVETAAVQPLSRVQRLLENAQCALDAETDLSSIEALLREIDANFSADGMPDELAASR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH EKLAARLAEPA HHHHHHHCCCC >Mature Secondary Structure MNSQLQHASAQVRSAIRSATQGLVGREQLAELIILAAVAQEHLLVIGPPGTAKSAVVRRV CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHH AQAMGGRYFEYLLGRYTEPSELFGAVDLRKLREGTVETDTTGMLPEAEVAFLDEVFLGST HHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHH AILNTLLGILNERRFRRGHTQLHCPLRVCIGAANGLPDDASLAAFGDRFLLHAFIEATAD HHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH HQLEAMLEGGWQAEQAPAASEISLADIDLLCQAAREVDMRAVRPMLAQAIRQLRGAGISL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SDRRIVKSQRLVAAAAALAGRMRADASDLWPLLYALPTQEAQQHAREILREQLAACANGV CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LASAVETAAVQPLSRVQRLLENAQCALDAETDLSSIEALLREIDANFSADGMPDELAASR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH EKLAARLAEPA HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]