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The map label for this gene is fnr [C]

Identifier: 34498163

GI number: 34498163

Start: 2931874

End: 2932569

Strand: Direct

Name: fnr [C]

Synonym: CV_2708

Alternate gene names: 34498163

Gene position: 2931874-2932569 (Clockwise)

Preceding gene: 34498162

Following gene: 34498167

Centisome position: 61.71

GC content: 65.8

Gene sequence:

>696_bases
ATGTCCCAGATCGACATCATCCAGCATTTGCGCCACCAACCCTTGTTCCAGCGGCTTTCGGACCCGCAGCTGGCCGCGCT
GGAACCCCATGTCCGCCCCCAGCGCGGCGACAAGGGACAGCTGTTGTTCCAGCGCGGCGACGATTGCGACGGGATGTACG
TGGTGGTGTACGGCAAGGTGAAGCTGGCCATCCCCTCTCCCCAAGGCGTGGAAAAGGTCGTGGAGATCATCCACCCCGGC
CAGAGCTTCGCCGAAGCGGTGATGTTCCTGGGCAAACCCTACCCGGTGCTGGCCCAACTGCTGGAAGATAGCCTGCTGCT
GCACATCGGCGCCGCCGGCGTGTTCCAGGCGCTGGGAGAAGATCCGGGCTTCGCGCGCAACATGCTGGCCGGCATGTCGC
TGCGCCTGCATGGCATGGTGCGGGACGTGGAGCGCTACTCGGTGGAAACCGCGCTGCAGCGCGTGATCGGCTACTTGCTG
CAACAAATGGACGGCGCTCCAACCGGTGGGAAAGCGGTGCTGACGCTGGAAGCGAACAAGAACCTGATCGCCTCGCGGCT
GAACCTGACGCCGGAAACCTTCTCCCGCGTGCTGCAGCAGCTGAGCAAGGCCGGCCTGGTCGAAGTGGACGGCCGCGACA
TCGCCCTGCTCGACCCCGCCGCGCTGGCCGACTACGGCATGACGCCGCCCGCCTGA

Upstream 100 bases:

>100_bases
GGCATCCAAGTTTGGGCAACCTGCCGGACGCTCAATATCGCGCTTTGCTAATAATTGGGTTAGCATCAGCAATCGTCACG
CCAACCCCCAAGACCGCGCC

Downstream 100 bases:

>100_bases
GCAACGCGCCATCCGCGGATGCAGGCGCGGTAGCGCCATACCGCCCCGGCCGCGTCCGCCGCCGCCAGCACCGCCAGCGC
GCATACCGCGGCGCCAGCCG

Product: Crp/Fnr family transcriptional regulator

Products: NA

Alternate protein names: Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Transcriptional Activator FtrB; Crp Family Transcriptional Regulator; Regulatory Protein; Transcription Regulator; Cyclic AMP Receptor Protein; Regulator Of Biofilm Formation Fnr Family; FNR-Like Transcriptional Regulator; Transcription Regulator Protein Crp/Fnr Family; Transcriptional Regulator DnrS; Transcriptional Regulator Dnr Type; Transcriptional Activator; DnrE Protein; Crp-Like Transcriptional Regulator; Fnr-Like Transcriptional Activator; Crp Family Regulatory Protein; DNR Protein; Transcription Regulator Protein; Transcriptional Regulator Dnr-Type; Fnr-Like Regulatory Protein; Catabolite Gene Activator; Denitrification Transcriptional Regulator Protein; CAMP-Bindin Transcriptional Regulator; Transcriptional Regulator Dnr; Transcriptional Regulator Dnr/Nnr Type

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSQIDIIQHLRHQPLFQRLSDPQLAALEPHVRPQRGDKGQLLFQRGDDCDGMYVVVYGKVKLAIPSPQGVEKVVEIIHPG
QSFAEAVMFLGKPYPVLAQLLEDSLLLHIGAAGVFQALGEDPGFARNMLAGMSLRLHGMVRDVERYSVETALQRVIGYLL
QQMDGAPTGGKAVLTLEANKNLIASRLNLTPETFSRVLQQLSKAGLVEVDGRDIALLDPAALADYGMTPPA

Sequences:

>Translated_231_residues
MSQIDIIQHLRHQPLFQRLSDPQLAALEPHVRPQRGDKGQLLFQRGDDCDGMYVVVYGKVKLAIPSPQGVEKVVEIIHPG
QSFAEAVMFLGKPYPVLAQLLEDSLLLHIGAAGVFQALGEDPGFARNMLAGMSLRLHGMVRDVERYSVETALQRVIGYLL
QQMDGAPTGGKAVLTLEANKNLIASRLNLTPETFSRVLQQLSKAGLVEVDGRDIALLDPAALADYGMTPPA
>Mature_230_residues
SQIDIIQHLRHQPLFQRLSDPQLAALEPHVRPQRGDKGQLLFQRGDDCDGMYVVVYGKVKLAIPSPQGVEKVVEIIHPGQ
SFAEAVMFLGKPYPVLAQLLEDSLLLHIGAAGVFQALGEDPGFARNMLAGMSLRLHGMVRDVERYSVETALQRVIGYLLQ
QMDGAPTGGKAVLTLEANKNLIASRLNLTPETFSRVLQQLSKAGLVEVDGRDIALLDPAALADYGMTPPA

Specific function: Global Transcription Factor That Controls The Expression Of Over 100 Target Genes In Response To Anoxia. It Facilitates The Adaptation To Anaerobic Growth Conditions By Regulating The Expression Of Gene Products That Are Involved In Anaerobic Energy Metab

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25171; Mature: 25039

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQIDIIQHLRHQPLFQRLSDPQLAALEPHVRPQRGDKGQLLFQRGDDCDGMYVVVYGKV
CCHHHHHHHHHCCHHHHHCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEE
KLAIPSPQGVEKVVEIIHPGQSFAEAVMFLGKPYPVLAQLLEDSLLLHIGAAGVFQALGE
EEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPGFARNMLAGMSLRLHGMVRDVERYSVETALQRVIGYLLQQMDGAPTGGKAVLTLEANK
CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
NLIASRLNLTPETFSRVLQQLSKAGLVEVDGRDIALLDPAALADYGMTPPA
CHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCEEEECCHHHHHCCCCCCC
>Mature Secondary Structure 
SQIDIIQHLRHQPLFQRLSDPQLAALEPHVRPQRGDKGQLLFQRGDDCDGMYVVVYGKV
CHHHHHHHHHCCHHHHHCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEE
KLAIPSPQGVEKVVEIIHPGQSFAEAVMFLGKPYPVLAQLLEDSLLLHIGAAGVFQALGE
EEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPGFARNMLAGMSLRLHGMVRDVERYSVETALQRVIGYLLQQMDGAPTGGKAVLTLEANK
CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
NLIASRLNLTPETFSRVLQQLSKAGLVEVDGRDIALLDPAALADYGMTPPA
CHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCEEEECCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA