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The map label for this gene is slt [H]

Identifier: 34498066

GI number: 34498066

Start: 2819331

End: 2819951

Strand: Direct

Name: slt [H]

Synonym: CV_2611

Alternate gene names: 34498066

Gene position: 2819331-2819951 (Clockwise)

Preceding gene: 34498065

Following gene: 34498067

Centisome position: 59.34

GC content: 57.81

Gene sequence:

>621_bases
TTGGTCTGGACCCGGGGTCCAGAGCCATCCGCTCGCGCAGGTTCGGAGCCGGCGGCCTCCAGCCAACCCGTCTCATCCGG
CCCGGAAACCAAGACAGCACCTCAAGACGGCATCGCCGCGCATCTGCCGCTGGCCCATAAAATATCCCATGAGCTGGATC
TCGATCCCAAACTGCTGCATGCGATCATCAAGGTCGAATCCGGCTATCGGCCTCGGGCCATCTCGTCAAAGGGTGCCCAA
GGCCTGATGCAGGTGATGCCGGAAACCGGGAAACGCTTTGGATTTACCGATTTGATGAATCCGGAAAACAACTTGCGCGC
CGGCGCCAGCTATCTGAAATGGCTGCTGAATCACTTCGAGAACGATCTGGAGCTTGCAATCGCCGGATATAACGCAGGAG
AAGGCGCAGTTAAAAAGCATGGCAGGAAAATCCCGCCTTATCCGGAAACGCAAAACTATGTAAAAAAGGTAATGGCATCG
TATTCGGAGCCAGAATCCCATCCCTTGCCTCCAAGCCCCTCCCCCGCACCCCGCAAAACCCAGACACCGCCCCCTGCGGG
AAAATCCATCCCGGCCAAGCTATTCGGCTTGCTGCTGTCATCTCCGCTCGCCCCTTCCTAG

Upstream 100 bases:

>100_bases
CATCAAGCCCATTATCAGGTTTCTGCTATGTAGTGTCAGCTTGGTTTCGCATGCGTGGGCAGCCCCGCTTGCCGAGTCCT
CTCCATCCCAATCCGCGCCC

Downstream 100 bases:

>100_bases
AAGCTAGATCGTGTGGACTTTACCCGGGGCAGTCCAGATAGGCATCCCGGTCAGTGTCGGCATCGGCCCCAGCAAAACGC
TGGCCAAGCTGGCCAACCAC

Product: peptidoglycan N-acetylmuramoylhydrolase

Products: 1,6-Anhydrobond [C]

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MVWTRGPEPSARAGSEPAASSQPVSSGPETKTAPQDGIAAHLPLAHKISHELDLDPKLLHAIIKVESGYRPRAISSKGAQ
GLMQVMPETGKRFGFTDLMNPENNLRAGASYLKWLLNHFENDLELAIAGYNAGEGAVKKHGRKIPPYPETQNYVKKVMAS
YSEPESHPLPPSPSPAPRKTQTPPPAGKSIPAKLFGLLLSSPLAPS

Sequences:

>Translated_206_residues
MVWTRGPEPSARAGSEPAASSQPVSSGPETKTAPQDGIAAHLPLAHKISHELDLDPKLLHAIIKVESGYRPRAISSKGAQ
GLMQVMPETGKRFGFTDLMNPENNLRAGASYLKWLLNHFENDLELAIAGYNAGEGAVKKHGRKIPPYPETQNYVKKVMAS
YSEPESHPLPPSPSPAPRKTQTPPPAGKSIPAKLFGLLLSSPLAPS
>Mature_206_residues
MVWTRGPEPSARAGSEPAASSQPVSSGPETKTAPQDGIAAHLPLAHKISHELDLDPKLLHAIIKVESGYRPRAISSKGAQ
GLMQVMPETGKRFGFTDLMNPENNLRAGASYLKWLLNHFENDLELAIAGYNAGEGAVKKHGRKIPPYPETQNYVKKVMAS
YSEPESHPLPPSPSPAPRKTQTPPPAGKSIPAKLFGLLLSSPLAPS

Specific function: Murein-Degrading Enzyme. Catalyzes The Cleavage Of The Glycosidic Bonds Between N-Acetylmuramic Acid And N- Acetylglucosamine Residues In Peptidoglycan. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division. [C]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Periplasmic Protein. Tightly Associated With The Murein Sacculus [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87082441, Length=121, Percent_Identity=37.1900826446281, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 22079; Mature: 22079

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00922 TRANSGLYCOSYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWTRGPEPSARAGSEPAASSQPVSSGPETKTAPQDGIAAHLPLAHKISHELDLDPKLLH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHHH
AIIKVESGYRPRAISSKGAQGLMQVMPETGKRFGFTDLMNPENNLRAGASYLKWLLNHFE
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCC
NDLELAIAGYNAGEGAVKKHGRKIPPYPETQNYVKKVMASYSEPESHPLPPSPSPAPRKT
CCEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QTPPPAGKSIPAKLFGLLLSSPLAPS
CCCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVWTRGPEPSARAGSEPAASSQPVSSGPETKTAPQDGIAAHLPLAHKISHELDLDPKLLH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHHH
AIIKVESGYRPRAISSKGAQGLMQVMPETGKRFGFTDLMNPENNLRAGASYLKWLLNHFE
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCC
NDLELAIAGYNAGEGAVKKHGRKIPPYPETQNYVKKVMASYSEPESHPLPPSPSPAPRKT
CCEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QTPPPAGKSIPAKLFGLLLSSPLAPS
CCCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]