Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34498044

Identifier: 34498044

GI number: 34498044

Start: 2788877

End: 2789464

Strand: Direct

Name: 34498044

Synonym: CV_2589

Alternate gene names: NA

Gene position: 2788877-2789464 (Clockwise)

Preceding gene: 34498043

Following gene: 34498045

Centisome position: 58.7

GC content: 66.16

Gene sequence:

>588_bases
ATGAAACCCGCGATATCCGCCGAACTGCAACGGTTGCATCAGCTGGCTTGGCGCGCCGGCGCCTGGATGGACCAAGGCTG
GTGGCATGAGCTGGACTTGCGGCCCTGGCAGCAAAGCTACCAGCGCCATCCAGTCTGTCGTCCGGCGCTGGACCGGTTGA
TCGCCAATCGGCGCGGCTTTCCGCAAACGCCTCTGCCCGCATCGCTGACCCCGCGACAGCAAGCCATGCTGGCACTGGAG
TCGCGCCTGCCCCGCGTGCTTACCGCGCTGGGACTGCTAGCCATGGAGTGTCCGGATTACTTGCTGCTGGGCAGCTACCG
GCGCCCGCTGGCTGCCTGCCTGGGCGAACGCGGCTGCGATCAATTGCTGGCGCTGAGCGCCTTCCCCGCCCCCCGGCAAC
CAAACCTGGCGCCGGAACAAGTGGCGGCTGCGGCACTGGACCTAGGAACACGCTGGTGGCGAAGCGCCGATCCTAGCTGC
CCGGTGCAAGCTGCACTGTCGATACTGTTGCCGCCCGGTCCCGCTGAAGCCATGCCGGCCATGGGCGACGCCATCTCATG
GCTGATTCGGATCGGACGCTTTTTATGA

Upstream 100 bases:

>100_bases
GGCTGCGGAAATACGCCATATGGCTTGTCGGCGGCCTAACCCTGCTGGGCTGCGCCGCCGCCATCGGTGTGCTGGCCTGG
CGCCGGCGCACGGCCGCATC

Downstream 100 bases:

>100_bases
CCGCCCCCGCCCGCATCAGGCATAAGAGCTGCTAACCAAACCCAGCCAAGCGTCTGAGGCAAGGCGCGCCGACGTAGGCA
GTACAAGTCGCAACGCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKPAISAELQRLHQLAWRAGAWMDQGWWHELDLRPWQQSYQRHPVCRPALDRLIANRRGFPQTPLPASLTPRQQAMLALE
SRLPRVLTALGLLAMECPDYLLLGSYRRPLAACLGERGCDQLLALSAFPAPRQPNLAPEQVAAAALDLGTRWWRSADPSC
PVQAALSILLPPGPAEAMPAMGDAISWLIRIGRFL

Sequences:

>Translated_195_residues
MKPAISAELQRLHQLAWRAGAWMDQGWWHELDLRPWQQSYQRHPVCRPALDRLIANRRGFPQTPLPASLTPRQQAMLALE
SRLPRVLTALGLLAMECPDYLLLGSYRRPLAACLGERGCDQLLALSAFPAPRQPNLAPEQVAAAALDLGTRWWRSADPSC
PVQAALSILLPPGPAEAMPAMGDAISWLIRIGRFL
>Mature_195_residues
MKPAISAELQRLHQLAWRAGAWMDQGWWHELDLRPWQQSYQRHPVCRPALDRLIANRRGFPQTPLPASLTPRQQAMLALE
SRLPRVLTALGLLAMECPDYLLLGSYRRPLAACLGERGCDQLLALSAFPAPRQPNLAPEQVAAAALDLGTRWWRSADPSC
PVQAALSILLPPGPAEAMPAMGDAISWLIRIGRFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21668; Mature: 21668

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAISAELQRLHQLAWRAGAWMDQGWWHELDLRPWQQSYQRHPVCRPALDRLIANRRGF
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCC
PQTPLPASLTPRQQAMLALESRLPRVLTALGLLAMECPDYLLLGSYRRPLAACLGERGCD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCHH
QLLALSAFPAPRQPNLAPEQVAAAALDLGTRWWRSADPSCPVQAALSILLPPGPAEAMPA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHH
MGDAISWLIRIGRFL
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPAISAELQRLHQLAWRAGAWMDQGWWHELDLRPWQQSYQRHPVCRPALDRLIANRRGF
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCC
PQTPLPASLTPRQQAMLALESRLPRVLTALGLLAMECPDYLLLGSYRRPLAACLGERGCD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCHH
QLLALSAFPAPRQPNLAPEQVAAAALDLGTRWWRSADPSCPVQAALSILLPPGPAEAMPA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHH
MGDAISWLIRIGRFL
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA