| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498044
Identifier: 34498044
GI number: 34498044
Start: 2788877
End: 2789464
Strand: Direct
Name: 34498044
Synonym: CV_2589
Alternate gene names: NA
Gene position: 2788877-2789464 (Clockwise)
Preceding gene: 34498043
Following gene: 34498045
Centisome position: 58.7
GC content: 66.16
Gene sequence:
>588_bases ATGAAACCCGCGATATCCGCCGAACTGCAACGGTTGCATCAGCTGGCTTGGCGCGCCGGCGCCTGGATGGACCAAGGCTG GTGGCATGAGCTGGACTTGCGGCCCTGGCAGCAAAGCTACCAGCGCCATCCAGTCTGTCGTCCGGCGCTGGACCGGTTGA TCGCCAATCGGCGCGGCTTTCCGCAAACGCCTCTGCCCGCATCGCTGACCCCGCGACAGCAAGCCATGCTGGCACTGGAG TCGCGCCTGCCCCGCGTGCTTACCGCGCTGGGACTGCTAGCCATGGAGTGTCCGGATTACTTGCTGCTGGGCAGCTACCG GCGCCCGCTGGCTGCCTGCCTGGGCGAACGCGGCTGCGATCAATTGCTGGCGCTGAGCGCCTTCCCCGCCCCCCGGCAAC CAAACCTGGCGCCGGAACAAGTGGCGGCTGCGGCACTGGACCTAGGAACACGCTGGTGGCGAAGCGCCGATCCTAGCTGC CCGGTGCAAGCTGCACTGTCGATACTGTTGCCGCCCGGTCCCGCTGAAGCCATGCCGGCCATGGGCGACGCCATCTCATG GCTGATTCGGATCGGACGCTTTTTATGA
Upstream 100 bases:
>100_bases GGCTGCGGAAATACGCCATATGGCTTGTCGGCGGCCTAACCCTGCTGGGCTGCGCCGCCGCCATCGGTGTGCTGGCCTGG CGCCGGCGCACGGCCGCATC
Downstream 100 bases:
>100_bases CCGCCCCCGCCCGCATCAGGCATAAGAGCTGCTAACCAAACCCAGCCAAGCGTCTGAGGCAAGGCGCGCCGACGTAGGCA GTACAAGTCGCAACGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKPAISAELQRLHQLAWRAGAWMDQGWWHELDLRPWQQSYQRHPVCRPALDRLIANRRGFPQTPLPASLTPRQQAMLALE SRLPRVLTALGLLAMECPDYLLLGSYRRPLAACLGERGCDQLLALSAFPAPRQPNLAPEQVAAAALDLGTRWWRSADPSC PVQAALSILLPPGPAEAMPAMGDAISWLIRIGRFL
Sequences:
>Translated_195_residues MKPAISAELQRLHQLAWRAGAWMDQGWWHELDLRPWQQSYQRHPVCRPALDRLIANRRGFPQTPLPASLTPRQQAMLALE SRLPRVLTALGLLAMECPDYLLLGSYRRPLAACLGERGCDQLLALSAFPAPRQPNLAPEQVAAAALDLGTRWWRSADPSC PVQAALSILLPPGPAEAMPAMGDAISWLIRIGRFL >Mature_195_residues MKPAISAELQRLHQLAWRAGAWMDQGWWHELDLRPWQQSYQRHPVCRPALDRLIANRRGFPQTPLPASLTPRQQAMLALE SRLPRVLTALGLLAMECPDYLLLGSYRRPLAACLGERGCDQLLALSAFPAPRQPNLAPEQVAAAALDLGTRWWRSADPSC PVQAALSILLPPGPAEAMPAMGDAISWLIRIGRFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21668; Mature: 21668
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPAISAELQRLHQLAWRAGAWMDQGWWHELDLRPWQQSYQRHPVCRPALDRLIANRRGF CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCC PQTPLPASLTPRQQAMLALESRLPRVLTALGLLAMECPDYLLLGSYRRPLAACLGERGCD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCHH QLLALSAFPAPRQPNLAPEQVAAAALDLGTRWWRSADPSCPVQAALSILLPPGPAEAMPA HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHH MGDAISWLIRIGRFL HHHHHHHHHHHHHCC >Mature Secondary Structure MKPAISAELQRLHQLAWRAGAWMDQGWWHELDLRPWQQSYQRHPVCRPALDRLIANRRGF CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCC PQTPLPASLTPRQQAMLALESRLPRVLTALGLLAMECPDYLLLGSYRRPLAACLGERGCD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCHH QLLALSAFPAPRQPNLAPEQVAAAALDLGTRWWRSADPSCPVQAALSILLPPGPAEAMPA HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHH MGDAISWLIRIGRFL HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA