Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is yufN [H]

Identifier: 34497922

GI number: 34497922

Start: 2653271

End: 2654281

Strand: Direct

Name: yufN [H]

Synonym: CV_2467

Alternate gene names: 34497922

Gene position: 2653271-2654281 (Clockwise)

Preceding gene: 34497921

Following gene: 34497923

Centisome position: 55.85

GC content: 63.5

Gene sequence:

>1011_bases
ATGAAAATGACGTTTGCGATCAAGACCGCAGGATGCGCCGTAGCCGCCGCCCTGCTCGCCGGCCCCGCGCTGGCCAAGGA
CTTCAACGTGGCCGTGGTGTACGACCAGGCCGGCAAGTTCGACAAGAGCTTCAACGAAGCGGCCTATACCGGCGCCGAAC
GCTTCAAGAAAGAGTTCAAGATCAATTACCGCGAAGGTCAGCCCAGCAACGATGCGCAGAAGGAACAAGTGCTGCGCAAT
ATGGCGCGCAAAGGCGCCGACCTGGTAGTGGCGGTGGGCTTTGCCTACACCCAATCGATCGAGACCGTGGCCAAGGAATT
CCCGAACACCAAGTTCACGCTGGTGGACTCGGTGGCCAAGGGCGCCAATGTGCAGAGCATCGCCTTCAAGGAACAGGAAG
GCTCCTTCCTGGTGGGCATGGCCGCCGCGCTGAAGTCCAAGACCGGCAAGGTGGGCTACCTGGGCGGCATGGACGTGCCG
CTGATCCGCGCCTTCGGCTGCGGCTACGCGCAAGGCGCCCGCTACGTGAACCCGAAGGCCGTGGTGCTGCAGAACATGCT
GGGCACCACCCACACCGCCTTCAACGACCCGTCGCGCGGCAACGAGCTGGCCAAGAGCCAGTACGACCGCGGCGCCGACG
TGATCTTCGCCGCGGCCGCGCTGTCGAACGTGGGCGTGATCCAGGCCGCCAAGGCCTCCGGCAAGTACTACATCGGCGTG
GACAGCAACCAGAACTACATGCAGCCGGGCACCGTGCTGACCTCCATGGTCAAGCGCGTGGACAACGCCGTGTACGAAAC
CATGCGCGACGCCAAGGACGGCAAGTGGAAGCCCAGCGTCAAGCTGATGGGCCTGAAGGAAAACGGCGTGGACTGGGCGC
TGGACCAGTACAACCGCGCGCTGATCACGCCGGAAATGGAGAAGAAGATCGTCGCCGCGCGCAAGGACATCATCGCCGGC
AAGATCAAGGTGGTGGACTACCGCGCGGCCAACAGCTGCCCGGTGAACTGA

Upstream 100 bases:

>100_bases
CGCGAGGCCTCACTCTTCCCGGCACGGCATGTCCCCTCGTTGAAGCGCCCGCGGAAGACTCGCGGGCAAGCCATCTCGAA
AACTACTACTAGAAAAGCTG

Downstream 100 bases:

>100_bases
GCCCGCAGGACCCAGTTCGAGGCAAGGCCCCGCTCGCGGGGCCTTTTTTATCGGCGCAACGGGCCTGCGATCCTGCGCAA
ACGCCGTGTTTATGGTATTC

Product: membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKMTFAIKTAGCAVAAALLAGPALAKDFNVAVVYDQAGKFDKSFNEAAYTGAERFKKEFKINYREGQPSNDAQKEQVLRN
MARKGADLVVAVGFAYTQSIETVAKEFPNTKFTLVDSVAKGANVQSIAFKEQEGSFLVGMAAALKSKTGKVGYLGGMDVP
LIRAFGCGYAQGARYVNPKAVVLQNMLGTTHTAFNDPSRGNELAKSQYDRGADVIFAAAALSNVGVIQAAKASGKYYIGV
DSNQNYMQPGTVLTSMVKRVDNAVYETMRDAKDGKWKPSVKLMGLKENGVDWALDQYNRALITPEMEKKIVAARKDIIAG
KIKVVDYRAANSCPVN

Sequences:

>Translated_336_residues
MKMTFAIKTAGCAVAAALLAGPALAKDFNVAVVYDQAGKFDKSFNEAAYTGAERFKKEFKINYREGQPSNDAQKEQVLRN
MARKGADLVVAVGFAYTQSIETVAKEFPNTKFTLVDSVAKGANVQSIAFKEQEGSFLVGMAAALKSKTGKVGYLGGMDVP
LIRAFGCGYAQGARYVNPKAVVLQNMLGTTHTAFNDPSRGNELAKSQYDRGADVIFAAAALSNVGVIQAAKASGKYYIGV
DSNQNYMQPGTVLTSMVKRVDNAVYETMRDAKDGKWKPSVKLMGLKENGVDWALDQYNRALITPEMEKKIVAARKDIIAG
KIKVVDYRAANSCPVN
>Mature_336_residues
MKMTFAIKTAGCAVAAALLAGPALAKDFNVAVVYDQAGKFDKSFNEAAYTGAERFKKEFKINYREGQPSNDAQKEQVLRN
MARKGADLVVAVGFAYTQSIETVAKEFPNTKFTLVDSVAKGANVQSIAFKEQEGSFLVGMAAALKSKTGKVGYLGGMDVP
LIRAFGCGYAQGARYVNPKAVVLQNMLGTTHTAFNDPSRGNELAKSQYDRGADVIFAAAALSNVGVIQAAKASGKYYIGV
DSNQNYMQPGTVLTSMVKRVDNAVYETMRDAKDGKWKPSVKLMGLKENGVDWALDQYNRALITPEMEKKIVAARKDIIAG
KIKVVDYRAANSCPVN

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 36266; Mature: 36266

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTFAIKTAGCAVAAALLAGPALAKDFNVAVVYDQAGKFDKSFNEAAYTGAERFKKEFK
CCEEEEEEHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHE
INYREGQPSNDAQKEQVLRNMARKGADLVVAVGFAYTQSIETVAKEFPNTKFTLVDSVAK
EEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEHHHHHC
GANVQSIAFKEQEGSFLVGMAAALKSKTGKVGYLGGMDVPLIRAFGCGYAQGARYVNPKA
CCCEEEEEEECCCCCEEEHHHHHHHCCCCCEEEECCCCHHHHHHHCCCHHCCCCCCCCHH
VVLQNMLGTTHTAFNDPSRGNELAKSQYDRGADVIFAAAALSNVGVIQAAKASGKYYIGV
HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEE
DSNQNYMQPGTVLTSMVKRVDNAVYETMRDAKDGKWKPSVKLMGLKENGVDWALDQYNRA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHCCCE
LITPEMEKKIVAARKDIIAGKIKVVDYRAANSCPVN
EECCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKMTFAIKTAGCAVAAALLAGPALAKDFNVAVVYDQAGKFDKSFNEAAYTGAERFKKEFK
CCEEEEEEHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHE
INYREGQPSNDAQKEQVLRNMARKGADLVVAVGFAYTQSIETVAKEFPNTKFTLVDSVAK
EEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEHHHHHC
GANVQSIAFKEQEGSFLVGMAAALKSKTGKVGYLGGMDVPLIRAFGCGYAQGARYVNPKA
CCCEEEEEEECCCCCEEEHHHHHHHCCCCCEEEECCCCHHHHHHHCCCHHCCCCCCCCHH
VVLQNMLGTTHTAFNDPSRGNELAKSQYDRGADVIFAAAALSNVGVIQAAKASGKYYIGV
HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEE
DSNQNYMQPGTVLTSMVKRVDNAVYETMRDAKDGKWKPSVKLMGLKENGVDWALDQYNRA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHCCCE
LITPEMEKKIVAARKDIIAGKIKVVDYRAANSCPVN
EECCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]