| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497899
Identifier: 34497899
GI number: 34497899
Start: 2629858
End: 2630184
Strand: Direct
Name: 34497899
Synonym: CV_2444
Alternate gene names: NA
Gene position: 2629858-2630184 (Clockwise)
Preceding gene: 34497895
Following gene: 34497900
Centisome position: 55.35
GC content: 57.8
Gene sequence:
>327_bases ATGAAAAACAATCTGTTCGACCATATTCCCGGCGAGCTCCCAGAGGAGTGGTGCCAGGAAATTCTTTCTGGCGGCCAGGG GTTTCGCATGGAACGCATCGTGTCAAACGGACATTGTTCGCCGGATGGCTTCTGGTATGACCAGAATGAGCATGAATGGG TGTCGCTGCTATCCGGCGCCGCGATATTGGAATTCGCCGAACCAGATCAGCAGATGCGGCTGGAGCCTGGCGATGCGGTC ATGATCCCGGCCCATCGCCGCCACAGGGTCGCGTGGACCGATCCCGAACAGCGCAGCGTATGGCTGGCGGTATTTTTTCC GGCATGA
Upstream 100 bases:
>100_bases TGAGTAAAATCAGATATTTCCGCCGATAAAAGACCCGACTGGCGGACTATCCTGCGTTCAGTAGAATGCATCCCAGGGGA GCGACAAGGCCATGCTGATC
Downstream 100 bases:
>100_bases CGCGCCGGTCGCATGGGTTTCAAGACCGGTGTTCGGCTGAAAGCAAGCTTTCTTCCGCGAGCCGGATCCGCCGGCCCAAT ATTTGCTCCAATCGCTCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Phosphoribosylaminoimidazole Carboxylase ATPase Subunit; Cupin Family Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; Mannose-6-Phosphate Isomerase; Cupin 2 Barrel-Containing Protein; Lipid A 3-O-Deacylase
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MKNNLFDHIPGELPEEWCQEILSGGQGFRMERIVSNGHCSPDGFWYDQNEHEWVSLLSGAAILEFAEPDQQMRLEPGDAV MIPAHRRHRVAWTDPEQRSVWLAVFFPA
Sequences:
>Translated_108_residues MKNNLFDHIPGELPEEWCQEILSGGQGFRMERIVSNGHCSPDGFWYDQNEHEWVSLLSGAAILEFAEPDQQMRLEPGDAV MIPAHRRHRVAWTDPEQRSVWLAVFFPA >Mature_108_residues MKNNLFDHIPGELPEEWCQEILSGGQGFRMERIVSNGHCSPDGFWYDQNEHEWVSLLSGAAILEFAEPDQQMRLEPGDAV MIPAHRRHRVAWTDPEQRSVWLAVFFPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12461; Mature: 12461
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNLFDHIPGELPEEWCQEILSGGQGFRMERIVSNGHCSPDGFWYDQNEHEWVSLLSGA CCCCCCCCCCCCCCHHHHHHHHCCCCCCEEHHHHCCCCCCCCCCEECCCCHHHHHHHCCC AILEFAEPDQQMRLEPGDAVMIPAHRRHRVAWTDPEQRSVWLAVFFPA CEEEECCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKNNLFDHIPGELPEEWCQEILSGGQGFRMERIVSNGHCSPDGFWYDQNEHEWVSLLSGA CCCCCCCCCCCCCCHHHHHHHHCCCCCCEEHHHHCCCCCCCCCCEECCCCHHHHHHHCCC AILEFAEPDQQMRLEPGDAVMIPAHRRHRVAWTDPEQRSVWLAVFFPA CEEEECCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA