| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497887
Identifier: 34497887
GI number: 34497887
Start: 2615649
End: 2617088
Strand: Direct
Name: 34497887
Synonym: CV_2432
Alternate gene names: NA
Gene position: 2615649-2617088 (Clockwise)
Preceding gene: 34497886
Following gene: 34497888
Centisome position: 55.05
GC content: 59.03
Gene sequence:
>1440_bases ATGGTGAGCGACTTGGACTTTGACGAAGTCCATGGCATTTCAGACCTCCATATTGGCGGGCAACCAGGCTTTCAAATTTT CGGATCGACCGAGGAACTGGTCTGGCTACTGGATACGCTCAGCCAAAAGCCCGCCGAGCAACGCGTTGCGCTGGTCATCA ACGGCGATTTCATTGATTTTCTCGCCGAGCCCGGCGCGCGGCATTTTAACCCCGACAAGGCAATCGGAGATTTGGAGCGC ATCAAGGGGGACGGTACCTTTGCGGCCATTTTCCCGGCAATCCAGCGGTTCGTCTCGACGGCGAATCGAACCCTGATCAT CAATCTCGGCAATCATGACATCGAACTTTCCCTGCCATGGGTCCAGCGGCATTTATTGGAAATGCTGAGCGCCGGCGACG ACAGTCGACGCGGCCGGATACGGCTGGTCGCCGATGGCACGGGAGTGTCGTGTCGCGTTGGCAAGGCGAATGTTCTCTTT GTGCACGGAAACGAGGTGGACGACTGGAACCGGGCCAATTACGAGCAGCTCCGGATGGCTGCCAGAACGGGCCAATGGGG CGGGCGCATCGACCCCATCGAACCGAATGCCGGCTCAAAAATGGTCATCGAGGTGATGAATGACATCAAGCGCCAGTATC CATTCGTTGACTTGCTCAAGCCGGAAACGGAAGCCGCGATCCCCATTCTGCTGACGCTTTCTCCAGAGGCGTACGGCAAA CTGCAGCCGGTGCTCTCGGTGCTCGGCCGGGTGGGGCTGGACAAATTCAAAAGCCATATCGGCTGGCTTGGCGAAGACGA GGCTCTTCCAATCTCGGATGCGCTCGTCAACTCGACCCGGCCGCTGCCATCATCGCGGCAACTACTGGACGGCGTGGAGT ACATGGCGCGCCAGCAAGCAGATCCGATGGCGCTCTTGCCCGGCGCCGCCTCCCAGCAACTGGGGGTAATGGATGCCATA CGGGGGCTAATCCAGGGGAAGTCGACGGAGGAGGCATTGCGAAGGGGGCTGGATGGACTTGATAAGGACCAAAGCTTTAA TCCGAACGCAGTTGACGACACGTTCACCGCCCTGGATGAGCAGGTTGACCCGAGCATCGATTTTCTGGTGGCGGGCCACA CCCATCTAGAGCGTTCTCTTTCCCGAAGGAAAGGGCAGGGAAGCTATTTCAACAGCGGCACCTGGGCACGGCTTATCCAG ATCTCGCCGCAAACCCGCCAGGACCCCCAGGCGTTCAATACGTTGATCAACCGGCTTATCAAGAGCCGCAGCATGGGCGA ACTGGATCAGGCCGATGGTTTAGTGATCCGGCGCTGCTCGGTCGTGTCGATCTGGAAGGACGGAGACCGGACCCTTGGTG AACTGCGGCGTGTAGCGCTCGCCGCAGGACGAAAAACGCTGATCCCGGTACCGAATACCTTGCGGAGCAAGGAGGCCTGA
Upstream 100 bases:
>100_bases CAATGAATCTAGGCATTTGGCGAACAGCCAGCGCTTTGCCGAGGGCATAAAGACCTCGCCACGGCACGCGCCGCTTGGCG AATCTTGAGGAGGACGCACG
Downstream 100 bases:
>100_bases ATTGCATACCATATCGCTGGAGCTGCTTCGCCATGGTCCATCGAATAACCAGCTGCTGTCTCCGCTGACACCCTATCTGG CACTGTGCCAGAACCACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MVSDLDFDEVHGISDLHIGGQPGFQIFGSTEELVWLLDTLSQKPAEQRVALVINGDFIDFLAEPGARHFNPDKAIGDLER IKGDGTFAAIFPAIQRFVSTANRTLIINLGNHDIELSLPWVQRHLLEMLSAGDDSRRGRIRLVADGTGVSCRVGKANVLF VHGNEVDDWNRANYEQLRMAARTGQWGGRIDPIEPNAGSKMVIEVMNDIKRQYPFVDLLKPETEAAIPILLTLSPEAYGK LQPVLSVLGRVGLDKFKSHIGWLGEDEALPISDALVNSTRPLPSSRQLLDGVEYMARQQADPMALLPGAASQQLGVMDAI RGLIQGKSTEEALRRGLDGLDKDQSFNPNAVDDTFTALDEQVDPSIDFLVAGHTHLERSLSRRKGQGSYFNSGTWARLIQ ISPQTRQDPQAFNTLINRLIKSRSMGELDQADGLVIRRCSVVSIWKDGDRTLGELRRVALAAGRKTLIPVPNTLRSKEA
Sequences:
>Translated_479_residues MVSDLDFDEVHGISDLHIGGQPGFQIFGSTEELVWLLDTLSQKPAEQRVALVINGDFIDFLAEPGARHFNPDKAIGDLER IKGDGTFAAIFPAIQRFVSTANRTLIINLGNHDIELSLPWVQRHLLEMLSAGDDSRRGRIRLVADGTGVSCRVGKANVLF VHGNEVDDWNRANYEQLRMAARTGQWGGRIDPIEPNAGSKMVIEVMNDIKRQYPFVDLLKPETEAAIPILLTLSPEAYGK LQPVLSVLGRVGLDKFKSHIGWLGEDEALPISDALVNSTRPLPSSRQLLDGVEYMARQQADPMALLPGAASQQLGVMDAI RGLIQGKSTEEALRRGLDGLDKDQSFNPNAVDDTFTALDEQVDPSIDFLVAGHTHLERSLSRRKGQGSYFNSGTWARLIQ ISPQTRQDPQAFNTLINRLIKSRSMGELDQADGLVIRRCSVVSIWKDGDRTLGELRRVALAAGRKTLIPVPNTLRSKEA >Mature_479_residues MVSDLDFDEVHGISDLHIGGQPGFQIFGSTEELVWLLDTLSQKPAEQRVALVINGDFIDFLAEPGARHFNPDKAIGDLER IKGDGTFAAIFPAIQRFVSTANRTLIINLGNHDIELSLPWVQRHLLEMLSAGDDSRRGRIRLVADGTGVSCRVGKANVLF VHGNEVDDWNRANYEQLRMAARTGQWGGRIDPIEPNAGSKMVIEVMNDIKRQYPFVDLLKPETEAAIPILLTLSPEAYGK LQPVLSVLGRVGLDKFKSHIGWLGEDEALPISDALVNSTRPLPSSRQLLDGVEYMARQQADPMALLPGAASQQLGVMDAI RGLIQGKSTEEALRRGLDGLDKDQSFNPNAVDDTFTALDEQVDPSIDFLVAGHTHLERSLSRRKGQGSYFNSGTWARLIQ ISPQTRQDPQAFNTLINRLIKSRSMGELDQADGLVIRRCSVVSIWKDGDRTLGELRRVALAAGRKTLIPVPNTLRSKEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52805; Mature: 52805
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSDLDFDEVHGISDLHIGGQPGFQIFGSTEELVWLLDTLSQKPAEQRVALVINGDFIDF CCCCCCHHHHCCCCEEEECCCCCCEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH LAEPGARHFNPDKAIGDLERIKGDGTFAAIFPAIQRFVSTANRTLIINLGNHDIELSLPW HCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECHH VQRHLLEMLSAGDDSRRGRIRLVADGTGVSCRVGKANVLFVHGNEVDDWNRANYEQLRMA HHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCEEEEEEECCCCCCCCCCCHHHHHHH ARTGQWGGRIDPIEPNAGSKMVIEVMNDIKRQYPFVDLLKPETEAAIPILLTLSPEAYGK HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCHHHHH LQPVLSVLGRVGLDKFKSHIGWLGEDEALPISDALVNSTRPLPSSRQLLDGVEYMARQQA HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC DPMALLPGAASQQLGVMDAIRGLIQGKSTEEALRRGLDGLDKDQSFNPNAVDDTFTALDE CCEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH QVDPSIDFLVAGHTHLERSLSRRKGQGSYFNSGTWARLIQISPQTRQDPQAFNTLINRLI HCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH KSRSMGELDQADGLVIRRCSVVSIWKDGDRTLGELRRVALAAGRKTLIPVPNTLRSKEA HCCCCCCCHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCHHCCCCC >Mature Secondary Structure MVSDLDFDEVHGISDLHIGGQPGFQIFGSTEELVWLLDTLSQKPAEQRVALVINGDFIDF CCCCCCHHHHCCCCEEEECCCCCCEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH LAEPGARHFNPDKAIGDLERIKGDGTFAAIFPAIQRFVSTANRTLIINLGNHDIELSLPW HCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECHH VQRHLLEMLSAGDDSRRGRIRLVADGTGVSCRVGKANVLFVHGNEVDDWNRANYEQLRMA HHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCEEEEEEECCCCCCCCCCCHHHHHHH ARTGQWGGRIDPIEPNAGSKMVIEVMNDIKRQYPFVDLLKPETEAAIPILLTLSPEAYGK HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCHHHHH LQPVLSVLGRVGLDKFKSHIGWLGEDEALPISDALVNSTRPLPSSRQLLDGVEYMARQQA HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC DPMALLPGAASQQLGVMDAIRGLIQGKSTEEALRRGLDGLDKDQSFNPNAVDDTFTALDE CCEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH QVDPSIDFLVAGHTHLERSLSRRKGQGSYFNSGTWARLIQISPQTRQDPQAFNTLINRLI HCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH KSRSMGELDQADGLVIRRCSVVSIWKDGDRTLGELRRVALAAGRKTLIPVPNTLRSKEA HCCCCCCCHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA