| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497866
Identifier: 34497866
GI number: 34497866
Start: 2596809
End: 2597366
Strand: Reverse
Name: 34497866
Synonym: CV_2411
Alternate gene names: NA
Gene position: 2597366-2596809 (Counterclockwise)
Preceding gene: 34497872
Following gene: 34497864
Centisome position: 54.67
GC content: 64.87
Gene sequence:
>558_bases ATGAGACGCATACTCTGCTTGCTGCCGCTGATGTTCTGCCTGGCGGCCTGGGCTGCGGATAACGAACAAATACAGGGCCA GGGCGGCCGCATCCTGCGCTACAGCTCCACTCAGGTGCGGGTTGAGCCATCGGCCGACGATGTGCGCAGCTATCTGCAAG CGCGCGATGCGCGACTGGAGGGCGCGAGCGCGGCGGCGGCGCTGCAGGCCGGCCGCAAGGCATTGGCGCGTTTGGGATAC GGGCGGGTGGATGTCGATGCCGATTACGGCGTGATCCGCGCAGAGAAAGACGAGAAGCTGATCAGCGAAGCGCGCCAGGT GCTGCGCGGGCTGCTGAAATTGAAATTCCCGCTGCCGGGCAAACCGGATCATCAGACCACCGAGGTGCTGCTGACCCTGA AGCCGGGAACCCAGCCCCGGCAGGTATTGCTGCGGGCGAATATCCGCCAGACCGTCTGGGACAGCAACGGCAATTCGCGC GCGCTGCTGTGCAGCGACCCAGCGGTCTATCGCCAGCTGTTCGACCAGCTGAGCGACGCGCTGGGCAAATCGAACTAG
Upstream 100 bases:
>100_bases ATTGTGCCTATCGGCTAAAAATAAGGCAGCCTTCACGCAGATTGCAATCGTCATCAAATTCGGATTGGATGTCATGTCAA TGTTTTGATGGAAACTGCCA
Downstream 100 bases:
>100_bases CGCACAAAACAAAAGCCCCGCTTGCGCGGGGCTTCGTCATATTCCGAACCGCTCCGGAATCAGATGCTTTCCACCTTGGC CATCTTGCGACGCTCATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MRRILCLLPLMFCLAAWAADNEQIQGQGGRILRYSSTQVRVEPSADDVRSYLQARDARLEGASAAAALQAGRKALARLGY GRVDVDADYGVIRAEKDEKLISEARQVLRGLLKLKFPLPGKPDHQTTEVLLTLKPGTQPRQVLLRANIRQTVWDSNGNSR ALLCSDPAVYRQLFDQLSDALGKSN
Sequences:
>Translated_185_residues MRRILCLLPLMFCLAAWAADNEQIQGQGGRILRYSSTQVRVEPSADDVRSYLQARDARLEGASAAAALQAGRKALARLGY GRVDVDADYGVIRAEKDEKLISEARQVLRGLLKLKFPLPGKPDHQTTEVLLTLKPGTQPRQVLLRANIRQTVWDSNGNSR ALLCSDPAVYRQLFDQLSDALGKSN >Mature_185_residues MRRILCLLPLMFCLAAWAADNEQIQGQGGRILRYSSTQVRVEPSADDVRSYLQARDARLEGASAAAALQAGRKALARLGY GRVDVDADYGVIRAEKDEKLISEARQVLRGLLKLKFPLPGKPDHQTTEVLLTLKPGTQPRQVLLRANIRQTVWDSNGNSR ALLCSDPAVYRQLFDQLSDALGKSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20458; Mature: 20458
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRILCLLPLMFCLAAWAADNEQIQGQGGRILRYSSTQVRVEPSADDVRSYLQARDARLE CCHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHCC GASAAAALQAGRKALARLGYGRVDVDADYGVIRAEKDEKLISEARQVLRGLLKLKFPLPG CHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCC KPDHQTTEVLLTLKPGTQPRQVLLRANIRQTVWDSNGNSRALLCSDPAVYRQLFDQLSDA CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHH LGKSN HCCCC >Mature Secondary Structure MRRILCLLPLMFCLAAWAADNEQIQGQGGRILRYSSTQVRVEPSADDVRSYLQARDARLE CCHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHCC GASAAAALQAGRKALARLGYGRVDVDADYGVIRAEKDEKLISEARQVLRGLLKLKFPLPG CHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCC KPDHQTTEVLLTLKPGTQPRQVLLRANIRQTVWDSNGNSRALLCSDPAVYRQLFDQLSDA CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHH LGKSN HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA