| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497857
Identifier: 34497857
GI number: 34497857
Start: 2586342
End: 2586812
Strand: Reverse
Name: 34497857
Synonym: CV_2402
Alternate gene names: NA
Gene position: 2586812-2586342 (Counterclockwise)
Preceding gene: 34497863
Following gene: 34497856
Centisome position: 54.45
GC content: 60.3
Gene sequence:
>471_bases ATGCCGCGGACAACTCGCATCACCTCATCTCAACTCATCGGATTCACGCTTTTAAAACTTGGGAATGAAGCGTGCAGGCA TCATAAAGAATGCATTTTCCGGAGCGCGCCATTCACATGGAATTCAGAATCAACCCTGAAATCCGGCACGACCAAAGTGC GCGAAGTTTTGCCGCGGGCGGAAACCATTGGACGGATAAACCGGCAGATCAACGTAGCCGCAAGAAATGAGGCAAGCCCT GTTCGAGAAAATTGGCGCGGCGGCGCCAGGTCCGCCTCAGCGCGACCCTCTCGGCGCCAGCCCTACGCGCGCTGCCGAGA ATGCGAGCCGGTCCTTCCCGAGGCAGAAGCAATGGACCCGCGCCCCCTCTCTCCCCGATCGAAGCCTGGACTCCCCGCCC AATCCTGCTCGCGGCCTCGCTGCAGGCCCTGTTACGAACCCAATTCGCCATCCCGCGCGCGCCGAGCGTAA
Upstream 100 bases:
>100_bases AACCCAGGCAAGCCAGCTTGCGGCTTCCGCCTCTCTGAAAAAGGGACATTTTCCACTCCACAGTTATTCAGGAATAAGCA AGCCAGCGCAGCCGATCCCC
Downstream 100 bases:
>100_bases AATCGGAGCCACTCGACCGACACATTGGCATCGATCCGCTCAAGCGATCGTACTTTCCCTGGACAGCCAATATCGTCGAC AATGAAACCAGACATAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MPRTTRITSSQLIGFTLLKLGNEACRHHKECIFRSAPFTWNSESTLKSGTTKVREVLPRAETIGRINRQINVAARNEASP VRENWRGGARSASARPSRRQPYARCRECEPVLPEAEAMDPRPLSPRSKPGLPAQSCSRPRCRPCYEPNSPSRARRA
Sequences:
>Translated_156_residues MPRTTRITSSQLIGFTLLKLGNEACRHHKECIFRSAPFTWNSESTLKSGTTKVREVLPRAETIGRINRQINVAARNEASP VRENWRGGARSASARPSRRQPYARCRECEPVLPEAEAMDPRPLSPRSKPGLPAQSCSRPRCRPCYEPNSPSRARRA >Mature_155_residues PRTTRITSSQLIGFTLLKLGNEACRHHKECIFRSAPFTWNSESTLKSGTTKVREVLPRAETIGRINRQINVAARNEASPV RENWRGGARSASARPSRRQPYARCRECEPVLPEAEAMDPRPLSPRSKPGLPAQSCSRPRCRPCYEPNSPSRARRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17551; Mature: 17420
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTTRITSSQLIGFTLLKLGNEACRHHKECIFRSAPFTWNSESTLKSGTTKVREVLPRA CCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH ETIGRINRQINVAARNEASPVRENWRGGARSASARPSRRQPYARCRECEPVLPEAEAMDP HHHHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC RPLSPRSKPGLPAQSCSRPRCRPCYEPNSPSRARRA CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRTTRITSSQLIGFTLLKLGNEACRHHKECIFRSAPFTWNSESTLKSGTTKVREVLPRA CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH ETIGRINRQINVAARNEASPVRENWRGGARSASARPSRRQPYARCRECEPVLPEAEAMDP HHHHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC RPLSPRSKPGLPAQSCSRPRCRPCYEPNSPSRARRA CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA