Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497857

Identifier: 34497857

GI number: 34497857

Start: 2586342

End: 2586812

Strand: Reverse

Name: 34497857

Synonym: CV_2402

Alternate gene names: NA

Gene position: 2586812-2586342 (Counterclockwise)

Preceding gene: 34497863

Following gene: 34497856

Centisome position: 54.45

GC content: 60.3

Gene sequence:

>471_bases
ATGCCGCGGACAACTCGCATCACCTCATCTCAACTCATCGGATTCACGCTTTTAAAACTTGGGAATGAAGCGTGCAGGCA
TCATAAAGAATGCATTTTCCGGAGCGCGCCATTCACATGGAATTCAGAATCAACCCTGAAATCCGGCACGACCAAAGTGC
GCGAAGTTTTGCCGCGGGCGGAAACCATTGGACGGATAAACCGGCAGATCAACGTAGCCGCAAGAAATGAGGCAAGCCCT
GTTCGAGAAAATTGGCGCGGCGGCGCCAGGTCCGCCTCAGCGCGACCCTCTCGGCGCCAGCCCTACGCGCGCTGCCGAGA
ATGCGAGCCGGTCCTTCCCGAGGCAGAAGCAATGGACCCGCGCCCCCTCTCTCCCCGATCGAAGCCTGGACTCCCCGCCC
AATCCTGCTCGCGGCCTCGCTGCAGGCCCTGTTACGAACCCAATTCGCCATCCCGCGCGCGCCGAGCGTAA

Upstream 100 bases:

>100_bases
AACCCAGGCAAGCCAGCTTGCGGCTTCCGCCTCTCTGAAAAAGGGACATTTTCCACTCCACAGTTATTCAGGAATAAGCA
AGCCAGCGCAGCCGATCCCC

Downstream 100 bases:

>100_bases
AATCGGAGCCACTCGACCGACACATTGGCATCGATCCGCTCAAGCGATCGTACTTTCCCTGGACAGCCAATATCGTCGAC
AATGAAACCAGACATAGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MPRTTRITSSQLIGFTLLKLGNEACRHHKECIFRSAPFTWNSESTLKSGTTKVREVLPRAETIGRINRQINVAARNEASP
VRENWRGGARSASARPSRRQPYARCRECEPVLPEAEAMDPRPLSPRSKPGLPAQSCSRPRCRPCYEPNSPSRARRA

Sequences:

>Translated_156_residues
MPRTTRITSSQLIGFTLLKLGNEACRHHKECIFRSAPFTWNSESTLKSGTTKVREVLPRAETIGRINRQINVAARNEASP
VRENWRGGARSASARPSRRQPYARCRECEPVLPEAEAMDPRPLSPRSKPGLPAQSCSRPRCRPCYEPNSPSRARRA
>Mature_155_residues
PRTTRITSSQLIGFTLLKLGNEACRHHKECIFRSAPFTWNSESTLKSGTTKVREVLPRAETIGRINRQINVAARNEASPV
RENWRGGARSASARPSRRQPYARCRECEPVLPEAEAMDPRPLSPRSKPGLPAQSCSRPRCRPCYEPNSPSRARRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17551; Mature: 17420

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTTRITSSQLIGFTLLKLGNEACRHHKECIFRSAPFTWNSESTLKSGTTKVREVLPRA
CCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
ETIGRINRQINVAARNEASPVRENWRGGARSASARPSRRQPYARCRECEPVLPEAEAMDP
HHHHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
RPLSPRSKPGLPAQSCSRPRCRPCYEPNSPSRARRA
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRTTRITSSQLIGFTLLKLGNEACRHHKECIFRSAPFTWNSESTLKSGTTKVREVLPRA
CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
ETIGRINRQINVAARNEASPVRENWRGGARSASARPSRRQPYARCRECEPVLPEAEAMDP
HHHHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
RPLSPRSKPGLPAQSCSRPRCRPCYEPNSPSRARRA
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA