| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is pgpA [H]
Identifier: 34497848
GI number: 34497848
Start: 2574146
End: 2574652
Strand: Direct
Name: pgpA [H]
Synonym: CV_2393
Alternate gene names: 34497848
Gene position: 2574146-2574652 (Clockwise)
Preceding gene: 34497847
Following gene: 34497849
Centisome position: 54.18
GC content: 64.89
Gene sequence:
>507_bases ATGACCATTTTGGCTGACGCACCAAGAATCACGCCCAACTGGCGTTTTCTGTTGAGCAACCCTATCCATCTGCTGTCTTT CGGTTTCGGCAGCGGCCTGATGAAAAAGGCGCCGGGCACCTGGGGCACCCTGGTCGCCTATCCCGTCTTCTTCCCCTTGC TGGCCTTGGGCATCCATGGCTGGATGCTGGTGGCGCTGTGCCTGCCGCTGTTCCTGATCGGCGTCTACGCCTGCGGCGTC ACCGGCCGCGCGCTGGGGGTGCACGACTACGGCGGCATCGTCTGGGACGAGGTGGTGGGCATGCTGATGGTGCTGGCCTT CGCGCCGGCAAGCTGGGCCGGCTGGATGCTGGCGTTCGCGCTGTTCCGCCTGTTCGACATCGTCAAGCCCTGGCCGATAC GCTGGTTCGACCAGCGCGTCGGCGGCGGTTTCGGCGTGATGGTGGATGATGTGATCGCCGCGCTGTTCGCGCTGGCCGCG CAGGCTGCGATCTGGCATTGGCTGTGA
Upstream 100 bases:
>100_bases GGCATCTGCCGCGCCACCCGCATCGGCCGCGTGCTGGACGGGCGGGGCGGCCTGTTGCTGGATGGCGCCGGGCAAGCCGT GACGCTGGACAAGAAAGGCT
Downstream 100 bases:
>100_bases TGCGAACGCATAAAACAGTTACAATCGGATCCTAAAGTGACAGACAGTTTGACGCTAGGCTGAGTCCAGCGCGCTGCCAT GAAAAACACGCCCGCGCTTC
Product: phosphatidylglycerophosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTILADAPRITPNWRFLLSNPIHLLSFGFGSGLMKKAPGTWGTLVAYPVFFPLLALGIHGWMLVALCLPLFLIGVYACGV TGRALGVHDYGGIVWDEVVGMLMVLAFAPASWAGWMLAFALFRLFDIVKPWPIRWFDQRVGGGFGVMVDDVIAALFALAA QAAIWHWL
Sequences:
>Translated_168_residues MTILADAPRITPNWRFLLSNPIHLLSFGFGSGLMKKAPGTWGTLVAYPVFFPLLALGIHGWMLVALCLPLFLIGVYACGV TGRALGVHDYGGIVWDEVVGMLMVLAFAPASWAGWMLAFALFRLFDIVKPWPIRWFDQRVGGGFGVMVDDVIAALFALAA QAAIWHWL >Mature_167_residues TILADAPRITPNWRFLLSNPIHLLSFGFGSGLMKKAPGTWGTLVAYPVFFPLLALGIHGWMLVALCLPLFLIGVYACGVT GRALGVHDYGGIVWDEVVGMLMVLAFAPASWAGWMLAFALFRLFDIVKPWPIRWFDQRVGGGFGVMVDDVIAALFALAAQ AAIWHWL
Specific function: Specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=159, Percent_Identity=45.2830188679245, Blast_Score=126, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 18433; Mature: 18302
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILADAPRITPNWRFLLSNPIHLLSFGFGSGLMKKAPGTWGTLVAYPVFFPLLALGIHG CCEECCCCCCCCCCHHHHCCCHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH WMLVALCLPLFLIGVYACGVTGRALGVHDYGGIVWDEVVGMLMVLAFAPASWAGWMLAFA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH LFRLFDIVKPWPIRWFDQRVGGGFGVMVDDVIAALFALAAQAAIWHWL HHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TILADAPRITPNWRFLLSNPIHLLSFGFGSGLMKKAPGTWGTLVAYPVFFPLLALGIHG CEECCCCCCCCCCHHHHCCCHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH WMLVALCLPLFLIGVYACGVTGRALGVHDYGGIVWDEVVGMLMVLAFAPASWAGWMLAFA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH LFRLFDIVKPWPIRWFDQRVGGGFGVMVDDVIAALFALAAQAAIWHWL HHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]