| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497832
Identifier: 34497832
GI number: 34497832
Start: 2560167
End: 2560490
Strand: Reverse
Name: 34497832
Synonym: CV_2377
Alternate gene names: NA
Gene position: 2560490-2560167 (Counterclockwise)
Preceding gene: 34497833
Following gene: 34497830
Centisome position: 53.89
GC content: 58.95
Gene sequence:
>324_bases ATGAAACTGTTTGAAAAGATCCCGAATCCTCGGGAAATCCGTCGCAAGCTGGGCCTGAACCAACAAGAGTTCTGGAGCCG CATCGGCGTTACCCAATCCGGCGGCTCCCGCTACGAAAGCGGCCGCAACATGCCGAAACCGGTCCGCGAACTGCTGCGCC TGGTTCACGTCGAGCAGATCGACCTGTCCAAGGTTCGCCGCGAAGATTTTGAAATCGTCGAAGACCTGAAGGAAACCCAC CCCGATCTGTACAAAAGCCTGCGCAAGGCCGTACGCACCAAGATCGAGGCACAGGAAGGCGGCGCCGAAGCTGCCGCCAG CTGA
Upstream 100 bases:
>100_bases AAAAATATTCCTGTTGAATTTTTTTTGCTATTTTTAGTAGGCAGGGCGAAGTCCTAAAAAAATACTAGAACCATTTGTTT CAGATACGAGAGGAACACTC
Downstream 100 bases:
>100_bases TTTCCAGCCCCTCGAAAAAGCCAGCCGCGGCACGCCGGGCTGGCTTTTTTTCATTCACGGGTCCACCAGGACCGCAAGGC TTCCCGCAGAATGACGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MKLFEKIPNPREIRRKLGLNQQEFWSRIGVTQSGGSRYESGRNMPKPVRELLRLVHVEQIDLSKVRREDFEIVEDLKETH PDLYKSLRKAVRTKIEAQEGGAEAAAS
Sequences:
>Translated_107_residues MKLFEKIPNPREIRRKLGLNQQEFWSRIGVTQSGGSRYESGRNMPKPVRELLRLVHVEQIDLSKVRREDFEIVEDLKETH PDLYKSLRKAVRTKIEAQEGGAEAAAS >Mature_107_residues MKLFEKIPNPREIRRKLGLNQQEFWSRIGVTQSGGSRYESGRNMPKPVRELLRLVHVEQIDLSKVRREDFEIVEDLKETH PDLYKSLRKAVRTKIEAQEGGAEAAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12387; Mature: 12387
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFEKIPNPREIRRKLGLNQQEFWSRIGVTQSGGSRYESGRNMPKPVRELLRLVHVEQI CCHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHH DLSKVRREDFEIVEDLKETHPDLYKSLRKAVRTKIEAQEGGAEAAAS HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKLFEKIPNPREIRRKLGLNQQEFWSRIGVTQSGGSRYESGRNMPKPVRELLRLVHVEQI CCHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHH DLSKVRREDFEIVEDLKETHPDLYKSLRKAVRTKIEAQEGGAEAAAS HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA