| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is aroF [H]
Identifier: 34497813
GI number: 34497813
Start: 2544894
End: 2545841
Strand: Direct
Name: aroF [H]
Synonym: CV_2358
Alternate gene names: 34497813
Gene position: 2544894-2545841 (Clockwise)
Preceding gene: 34497812
Following gene: 34497814
Centisome position: 53.56
GC content: 71.2
Gene sequence:
>948_bases ATGATAGTGGTGATGAATGCGGGCGCGAGCGAGGCCGATGTCAATGCCGTGGTGGCCAGGATAGAGCGCGCCGGTCTGGC TGCCCATGTCTCCCGCGGCATGGAGCGCACGGTGATAGGCGCGGTGGGCGAGGAGCGCGGGCTGGAGCCCGGCGGCTTCG AGGCCATGGCCGGCGTGGAGCGCGCGCTCAGGGTGGTCGGCGATGACCGCATCGTTTCCAGGGCCGCTCAGCCGGAGGAT AGCGCCGTGCGGGTGGGGCGGACGGTGTTCGGCGCCGGCGGCGCGGCCTGGCTGGGCGGCTGCGCGCAGGACTGGGGCGA AGCCGCGCTTCGCGCCGCCGCGCGCCATGTGGCGGCCGCCGGCGGCAAGCTGCTGTACGCGGGCGGCGGCCGCAGCCATG CCAGTCCCTACCATTACCAGGCGATGGGCGTGGCCGAACTGGAGCGCCTTTGCGACGCGGCCGGCGAGGCCGGGCTGGGC GCCGTCGCCGAATTGCGCGACGTCCGCCTGCTGGACTCGCATCTGGAACTGCAGACGGAGGCGCTGCTGCTGCCGCCGCA AGCGCTCAGCAATGTCGAATTGCTGCGCGAAGTCGGCCGCGTAAATAAGACTGTCATCCTGCAGCGGGACAATCGCCTGA CGCTGGACGAGTGGCTGGCGGCGGCCGAGCATGTGGCGCTTGGCGGCAATCACCAGATCGTGCTGTGCGAATGCGGAGGG GATGGCCAGTCTGTCAGCCTGGATGTCGGGAGCCTGCTCAGCCTGCGCAAGCGGACCCACTTGCCGGTCATCGCCGCGGG CCCCTTGGCTGCCGATCCGCTTGCCGCCCGCGCGCTGGCGCGCGCCGCGCTGACTTCAGGCGCCTGCGGCCTGATGCTGG AGTGCGCGGGGTGGACGGAGTCTGAAGCCGTCGCCTGGCAAACGTATCTGGCCGGCATCGCCGCATGA
Upstream 100 bases:
>100_bases TCTGGTCCAGGCCATCGCCGCTGGCCCGCTTGGCGCGGCGGCTGGCCGGCCGCTGGCGCCGCAATGTCTCCCCGCAGGGA GAGGACAAGGAGGCTGAATA
Downstream 100 bases:
>100_bases GCGCATTGGCGGACCTGCTGGGCGAGATCGCCGCTTGCCGGGTCTGCGAGGCGGCATTGCCTTGCGGGCCGAGGCCGGCG CTCAGGGCGGCGGCGGGAGC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MIVVMNAGASEADVNAVVARIERAGLAAHVSRGMERTVIGAVGEERGLEPGGFEAMAGVERALRVVGDDRIVSRAAQPED SAVRVGRTVFGAGGAAWLGGCAQDWGEAALRAAARHVAAAGGKLLYAGGGRSHASPYHYQAMGVAELERLCDAAGEAGLG AVAELRDVRLLDSHLELQTEALLLPPQALSNVELLREVGRVNKTVILQRDNRLTLDEWLAAAEHVALGGNHQIVLCECGG DGQSVSLDVGSLLSLRKRTHLPVIAAGPLAADPLAARALARAALTSGACGLMLECAGWTESEAVAWQTYLAGIAA
Sequences:
>Translated_315_residues MIVVMNAGASEADVNAVVARIERAGLAAHVSRGMERTVIGAVGEERGLEPGGFEAMAGVERALRVVGDDRIVSRAAQPED SAVRVGRTVFGAGGAAWLGGCAQDWGEAALRAAARHVAAAGGKLLYAGGGRSHASPYHYQAMGVAELERLCDAAGEAGLG AVAELRDVRLLDSHLELQTEALLLPPQALSNVELLREVGRVNKTVILQRDNRLTLDEWLAAAEHVALGGNHQIVLCECGG DGQSVSLDVGSLLSLRKRTHLPVIAAGPLAADPLAARALARAALTSGACGLMLECAGWTESEAVAWQTYLAGIAA >Mature_315_residues MIVVMNAGASEADVNAVVARIERAGLAAHVSRGMERTVIGAVGEERGLEPGGFEAMAGVERALRVVGDDRIVSRAAQPED SAVRVGRTVFGAGGAAWLGGCAQDWGEAALRAAARHVAAAGGKLLYAGGGRSHASPYHYQAMGVAELERLCDAAGEAGLG AVAELRDVRLLDSHLELQTEALLLPPQALSNVELLREVGRVNKTVILQRDNRLTLDEWLAAAEHVALGGNHQIVLCECGG DGQSVSLDVGSLLSLRKRTHLPVIAAGPLAADPLAARALARAALTSGACGLMLECAGWTESEAVAWQTYLAGIAA
Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG2876
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006268 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 32583; Mature: 32583
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVVMNAGASEADVNAVVARIERAGLAAHVSRGMERTVIGAVGEERGLEPGGFEAMAGVE CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCCCCCHHHHHHHH RALRVVGDDRIVSRAAQPEDSAVRVGRTVFGAGGAAWLGGCAQDWGEAALRAAARHVAAA HHHHHHCCHHHHHHCCCCCCHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GGKLLYAGGGRSHASPYHYQAMGVAELERLCDAAGEAGLGAVAELRDVRLLDSHLELQTE CCEEEEECCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH ALLLPPQALSNVELLREVGRVNKTVILQRDNRLTLDEWLAAAEHVALGGNHQIVLCECGG EEEECHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHEECCCCEEEEEEECC DGQSVSLDVGSLLSLRKRTHLPVIAAGPLAADPLAARALARAALTSGACGLMLECAGWTE CCCEEEECHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC SEAVAWQTYLAGIAA CHHHHHHHHHHHHCC >Mature Secondary Structure MIVVMNAGASEADVNAVVARIERAGLAAHVSRGMERTVIGAVGEERGLEPGGFEAMAGVE CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCCCCCHHHHHHHH RALRVVGDDRIVSRAAQPEDSAVRVGRTVFGAGGAAWLGGCAQDWGEAALRAAARHVAAA HHHHHHCCHHHHHHCCCCCCHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GGKLLYAGGGRSHASPYHYQAMGVAELERLCDAAGEAGLGAVAELRDVRLLDSHLELQTE CCEEEEECCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH ALLLPPQALSNVELLREVGRVNKTVILQRDNRLTLDEWLAAAEHVALGGNHQIVLCECGG EEEECHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHEECCCCEEEEEEECC DGQSVSLDVGSLLSLRKRTHLPVIAAGPLAADPLAARALARAALTSGACGLMLECAGWTE CCCEEEECHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC SEAVAWQTYLAGIAA CHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571; 12743122 [H]