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The map label for this gene is ydiK [H]

Identifier: 34497807

GI number: 34497807

Start: 2538454

End: 2539548

Strand: Reverse

Name: ydiK [H]

Synonym: CV_2352

Alternate gene names: 34497807

Gene position: 2539548-2538454 (Counterclockwise)

Preceding gene: 34497808

Following gene: 34497801

Centisome position: 53.45

GC content: 66.3

Gene sequence:

>1095_bases
ATGCCGCCCCTCCCCAACGCTTTTCCCAATGTCAGCATACTCGGCGCCTTTCGCGTCGCCATACTGGCGTTGCTGGTGGT
CGCTTGCCTGAAAGTGCTGCAACCCTTCCTCGGCGCGCTGACCTGGGCCGCCATCATCGCCATTTCCGCCTGGCCGCTGT
ACAGCCGGCTCAAGCTGCGGCTGCGCGGCCGCCACAAGCTGGCGGCGCTGCTGATCGTGCTGGCGCTGTCCGCCGCGCTG
GCCATTCCCATCGGCCTGATGGCGCTGACACTGGCCGACACGCTCCCGCATCTGGCCAATCTGGCCCATGACCTGACCAG
TTTCCGGCTGCCCGACGCGCCGGCATGGCTGACCAATCTTCCGGTTGTCGGCGACAGCCTGCAGAAGCTGTGGCAAAGCA
CCCAGGCAGACCTGCCCGGCTTCTTCGAGAAAGTCCGTCCCGCGATCAATCAGGCGGCGCTGTGGCTGCTGTCCGGCGGC
GCCAATCTGGGTCTGAGCCTGCTGGAAATCGTGTTGGCCATCGCCGTCGCCGGTCTGCTGCTGATCAACGGCGACAAGCT
GTGGGATCTGGTGGAGCGCATCGTGGTCAAGCTGGGCGGAGAAACCGCCGGCGACCTGCCCGAGGTGATCGCCCGCACCA
TACGCAGCGTCACCACCGGCGTGGTCGGCACCGCGCTGGCGCAGACCATCCTGTGCGTGATCGGCTTGTTGATCGCCGGC
GTGCCTGGCGCGCTGGTGCTGGGCTTTTTGTGCTTCATCGTCGCGGTGGCGCAGATGCCGACGCTGGTCGTCTGGCTGCC
GGCCGCCGCCTGGGTATTCTACACCGGCCACACCGGGCTGGGCGTGTTCCTGCTGATCTGGGGTTTCCTGCTGATCAACA
CCATAGACAACATCCTGAAGCCGCTGTTGATCAGCCAAGGCGCGCAGATGCCGCTGTCGGTGATCTTCCTCGGCGTGATC
GGCGGCCTGATCGCCTGGGGGGTGATCGGCCTGTTCATCGGCCCCACCCTGCTGGCGGTAGGCCTGACCATGCTGCGCCA
TTGGCTGCAGCGCGAGGACAACGAGGAGCTGGCCTGCGAGGGCGAGCAGGGCTGA

Upstream 100 bases:

>100_bases
CGCATTTGCCCGCGAGCTGGCCAAGGTGGCAAACTAGCGCCGTATCCGGCCGGCGCCATCGCGCCGGCCGCCATTTCCGC
CACCTAGATCGGACGCCTCC

Downstream 100 bases:

>100_bases
GTCCTGCTTCCAAAAGAAACGGCGCGGCGTCCTGATATGGGCGCCGCGCCGTTTTTTGTTTCCAATCATCGCTCAATAGT
CGGGACAACGAACCACCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MPPLPNAFPNVSILGAFRVAILALLVVACLKVLQPFLGALTWAAIIAISAWPLYSRLKLRLRGRHKLAALLIVLALSAAL
AIPIGLMALTLADTLPHLANLAHDLTSFRLPDAPAWLTNLPVVGDSLQKLWQSTQADLPGFFEKVRPAINQAALWLLSGG
ANLGLSLLEIVLAIAVAGLLLINGDKLWDLVERIVVKLGGETAGDLPEVIARTIRSVTTGVVGTALAQTILCVIGLLIAG
VPGALVLGFLCFIVAVAQMPTLVVWLPAAAWVFYTGHTGLGVFLLIWGFLLINTIDNILKPLLISQGAQMPLSVIFLGVI
GGLIAWGVIGLFIGPTLLAVGLTMLRHWLQREDNEELACEGEQG

Sequences:

>Translated_364_residues
MPPLPNAFPNVSILGAFRVAILALLVVACLKVLQPFLGALTWAAIIAISAWPLYSRLKLRLRGRHKLAALLIVLALSAAL
AIPIGLMALTLADTLPHLANLAHDLTSFRLPDAPAWLTNLPVVGDSLQKLWQSTQADLPGFFEKVRPAINQAALWLLSGG
ANLGLSLLEIVLAIAVAGLLLINGDKLWDLVERIVVKLGGETAGDLPEVIARTIRSVTTGVVGTALAQTILCVIGLLIAG
VPGALVLGFLCFIVAVAQMPTLVVWLPAAAWVFYTGHTGLGVFLLIWGFLLINTIDNILKPLLISQGAQMPLSVIFLGVI
GGLIAWGVIGLFIGPTLLAVGLTMLRHWLQREDNEELACEGEQG
>Mature_363_residues
PPLPNAFPNVSILGAFRVAILALLVVACLKVLQPFLGALTWAAIIAISAWPLYSRLKLRLRGRHKLAALLIVLALSAALA
IPIGLMALTLADTLPHLANLAHDLTSFRLPDAPAWLTNLPVVGDSLQKLWQSTQADLPGFFEKVRPAINQAALWLLSGGA
NLGLSLLEIVLAIAVAGLLLINGDKLWDLVERIVVKLGGETAGDLPEVIARTIRSVTTGVVGTALAQTILCVIGLLIAGV
PGALVLGFLCFIVAVAQMPTLVVWLPAAAWVFYTGHTGLGVFLLIWGFLLINTIDNILKPLLISQGAQMPLSVIFLGVIG
GLIAWGVIGLFIGPTLLAVGLTMLRHWLQREDNEELACEGEQG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=337, Percent_Identity=37.0919881305638, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38627; Mature: 38496

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLPNAFPNVSILGAFRVAILALLVVACLKVLQPFLGALTWAAIIAISAWPLYSRLKLR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRGRHKLAALLIVLALSAALAIPIGLMALTLADTLPHLANLAHDLTSFRLPDAPAWLTNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
PVVGDSLQKLWQSTQADLPGFFEKVRPAINQAALWLLSGGANLGLSLLEIVLAIAVAGLL
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LINGDKLWDLVERIVVKLGGETAGDLPEVIARTIRSVTTGVVGTALAQTILCVIGLLIAG
HHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPGALVLGFLCFIVAVAQMPTLVVWLPAAAWVFYTGHTGLGVFLLIWGFLLINTIDNILK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLLISQGAQMPLSVIFLGVIGGLIAWGVIGLFIGPTLLAVGLTMLRHWLQREDNEELACE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GEQG
CCCC
>Mature Secondary Structure 
PPLPNAFPNVSILGAFRVAILALLVVACLKVLQPFLGALTWAAIIAISAWPLYSRLKLR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRGRHKLAALLIVLALSAALAIPIGLMALTLADTLPHLANLAHDLTSFRLPDAPAWLTNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
PVVGDSLQKLWQSTQADLPGFFEKVRPAINQAALWLLSGGANLGLSLLEIVLAIAVAGLL
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LINGDKLWDLVERIVVKLGGETAGDLPEVIARTIRSVTTGVVGTALAQTILCVIGLLIAG
HHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPGALVLGFLCFIVAVAQMPTLVVWLPAAAWVFYTGHTGLGVFLLIWGFLLINTIDNILK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLLISQGAQMPLSVIFLGVIGGLIAWGVIGLFIGPTLLAVGLTMLRHWLQREDNEELACE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GEQG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]