Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is yufP [H]

Identifier: 34497804

GI number: 34497804

Start: 2534772

End: 2535779

Strand: Direct

Name: yufP [H]

Synonym: CV_2349

Alternate gene names: 34497804

Gene position: 2534772-2535779 (Clockwise)

Preceding gene: 34497803

Following gene: 34497805

Centisome position: 53.35

GC content: 64.58

Gene sequence:

>1008_bases
GTGACGGGCCTCGTCACCTGGATGATTGGCGAGAACCCCTGGGAATGCCTGCAGCTGCTGATCCACGGCGCCTTCGGCTA
CGGTGAGGGCATAGGCTACACGCTGTTTTACACCACCAGCTTCATTTTCGCCGGCCTGTCGGTGGCCACCGCCTTCCACG
CCGGGCTGTTCAACATCGGCGGCGAAGGCCAGGCCTATCTGGCCGGCCTGGGCGTGACGCTGGTGATGCTGGGCTTCGAC
CACGCGCTGCCGCCCTATGTGCTGATTCCGCTGGCCATGCTGGCGGCGATGGGCTTCGGCGCGGCCTGGGCCTACATCCC
GGCCTACCTGCAGGCCAAGCGCGGCAGCCACATCGTGGTCACCACCATCATGTTCAACTTCATCGCCTACTCGCTGATGT
TGTACCTGATCAGCCACCAGCTGATCGAAGCCGGCTCGCAGAACCCGACCACACGCCTGTTCGCCGAGAACGGCTGGATT
CCGCAGATGCACGAGCTGTTCGCCTTCCTGCCGAATTCGCCGCTGAACCTGAGCTTCGTGTTCGCGCTGCTGGCGGCCGG
CCTGTTCTACCTGATCGTCTGGCACAGCCGCTGGGGCTTCACGCTGCGCACCGTCGGCACCAACGAGCACGCCGCCGGCT
ACGCCGGCATGAGCGTCAGCCGCGTGATCATCGTGGCAATGTGCGTGTCCGGCGCGCTGGTGGGCCTGGCCTCGGTCAAC
GACCTCTTGGGCTCCTCGCATCGGATGAACGTGCTGTTCACCAACGGCGTCGGCTTCGTCGGCATCGCCGTGGCGCTGAT
GGGCCGCAACCACCCGGTGGGCATCATCCTGTCCGCGCTGCTGTTCGGCGCGCTGACCCAGGGCGGCTCCGACCTGTCGT
TCGAAAAACCGATGATCACCCGCGAGATGATCCTGTTCATCCAGGGCCTGATCATCCTGTTCTGCGGCGCGCTGGAAAAC
CTGTTCGAGCCGTTCATCGCCGGCCTGTTCAAGCGCAAGGACAAGTAA

Upstream 100 bases:

>100_bases
TGGGGGGGCACAAGCATTGAAATTCGGACAACCATCCACTCTGCCGCGTTGGGCGCAGCTGACCATCCTGCCGGCGCTCA
ACCTGCTGGCCGCCTTACTG

Downstream 100 bases:

>100_bases
TATGGAAATGTTCTTCAGTCTTCTCGATTCCACCGTGCGCGTGGCCACGCCGCTGGTGCTGGCCGCGCTGGCCGGCATGT
TCTCCGAGCGCTCCGGCGTG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MTGLVTWMIGENPWECLQLLIHGAFGYGEGIGYTLFYTTSFIFAGLSVATAFHAGLFNIGGEGQAYLAGLGVTLVMLGFD
HALPPYVLIPLAMLAAMGFGAAWAYIPAYLQAKRGSHIVVTTIMFNFIAYSLMLYLISHQLIEAGSQNPTTRLFAENGWI
PQMHELFAFLPNSPLNLSFVFALLAAGLFYLIVWHSRWGFTLRTVGTNEHAAGYAGMSVSRVIIVAMCVSGALVGLASVN
DLLGSSHRMNVLFTNGVGFVGIAVALMGRNHPVGIILSALLFGALTQGGSDLSFEKPMITREMILFIQGLIILFCGALEN
LFEPFIAGLFKRKDK

Sequences:

>Translated_335_residues
MTGLVTWMIGENPWECLQLLIHGAFGYGEGIGYTLFYTTSFIFAGLSVATAFHAGLFNIGGEGQAYLAGLGVTLVMLGFD
HALPPYVLIPLAMLAAMGFGAAWAYIPAYLQAKRGSHIVVTTIMFNFIAYSLMLYLISHQLIEAGSQNPTTRLFAENGWI
PQMHELFAFLPNSPLNLSFVFALLAAGLFYLIVWHSRWGFTLRTVGTNEHAAGYAGMSVSRVIIVAMCVSGALVGLASVN
DLLGSSHRMNVLFTNGVGFVGIAVALMGRNHPVGIILSALLFGALTQGGSDLSFEKPMITREMILFIQGLIILFCGALEN
LFEPFIAGLFKRKDK
>Mature_334_residues
TGLVTWMIGENPWECLQLLIHGAFGYGEGIGYTLFYTTSFIFAGLSVATAFHAGLFNIGGEGQAYLAGLGVTLVMLGFDH
ALPPYVLIPLAMLAAMGFGAAWAYIPAYLQAKRGSHIVVTTIMFNFIAYSLMLYLISHQLIEAGSQNPTTRLFAENGWIP
QMHELFAFLPNSPLNLSFVFALLAAGLFYLIVWHSRWGFTLRTVGTNEHAAGYAGMSVSRVIIVAMCVSGALVGLASVND
LLGSSHRMNVLFTNGVGFVGIAVALMGRNHPVGIILSALLFGALTQGGSDLSFEKPMITREMILFIQGLIILFCGALENL
FEPFIAGLFKRKDK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36233; Mature: 36102

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLVTWMIGENPWECLQLLIHGAFGYGEGIGYTLFYTTSFIFAGLSVATAFHAGLFNIG
CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GEGQAYLAGLGVTLVMLGFDHALPPYVLIPLAMLAAMGFGAAWAYIPAYLQAKRGSHIVV
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEH
TTIMFNFIAYSLMLYLISHQLIEAGSQNPTTRLFAENGWIPQMHELFAFLPNSPLNLSFV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHH
FALLAAGLFYLIVWHSRWGFTLRTVGTNEHAAGYAGMSVSRVIIVAMCVSGALVGLASVN
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DLLGSSHRMNVLFTNGVGFVGIAVALMGRNHPVGIILSALLFGALTQGGSDLSFEKPMIT
HHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH
REMILFIQGLIILFCGALENLFEPFIAGLFKRKDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TGLVTWMIGENPWECLQLLIHGAFGYGEGIGYTLFYTTSFIFAGLSVATAFHAGLFNIG
CCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GEGQAYLAGLGVTLVMLGFDHALPPYVLIPLAMLAAMGFGAAWAYIPAYLQAKRGSHIVV
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEH
TTIMFNFIAYSLMLYLISHQLIEAGSQNPTTRLFAENGWIPQMHELFAFLPNSPLNLSFV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHH
FALLAAGLFYLIVWHSRWGFTLRTVGTNEHAAGYAGMSVSRVIIVAMCVSGALVGLASVN
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DLLGSSHRMNVLFTNGVGFVGIAVALMGRNHPVGIILSALLFGALTQGGSDLSFEKPMIT
HHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH
REMILFIQGLIILFCGALENLFEPFIAGLFKRKDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]