| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yufP [H]
Identifier: 34497804
GI number: 34497804
Start: 2534772
End: 2535779
Strand: Direct
Name: yufP [H]
Synonym: CV_2349
Alternate gene names: 34497804
Gene position: 2534772-2535779 (Clockwise)
Preceding gene: 34497803
Following gene: 34497805
Centisome position: 53.35
GC content: 64.58
Gene sequence:
>1008_bases GTGACGGGCCTCGTCACCTGGATGATTGGCGAGAACCCCTGGGAATGCCTGCAGCTGCTGATCCACGGCGCCTTCGGCTA CGGTGAGGGCATAGGCTACACGCTGTTTTACACCACCAGCTTCATTTTCGCCGGCCTGTCGGTGGCCACCGCCTTCCACG CCGGGCTGTTCAACATCGGCGGCGAAGGCCAGGCCTATCTGGCCGGCCTGGGCGTGACGCTGGTGATGCTGGGCTTCGAC CACGCGCTGCCGCCCTATGTGCTGATTCCGCTGGCCATGCTGGCGGCGATGGGCTTCGGCGCGGCCTGGGCCTACATCCC GGCCTACCTGCAGGCCAAGCGCGGCAGCCACATCGTGGTCACCACCATCATGTTCAACTTCATCGCCTACTCGCTGATGT TGTACCTGATCAGCCACCAGCTGATCGAAGCCGGCTCGCAGAACCCGACCACACGCCTGTTCGCCGAGAACGGCTGGATT CCGCAGATGCACGAGCTGTTCGCCTTCCTGCCGAATTCGCCGCTGAACCTGAGCTTCGTGTTCGCGCTGCTGGCGGCCGG CCTGTTCTACCTGATCGTCTGGCACAGCCGCTGGGGCTTCACGCTGCGCACCGTCGGCACCAACGAGCACGCCGCCGGCT ACGCCGGCATGAGCGTCAGCCGCGTGATCATCGTGGCAATGTGCGTGTCCGGCGCGCTGGTGGGCCTGGCCTCGGTCAAC GACCTCTTGGGCTCCTCGCATCGGATGAACGTGCTGTTCACCAACGGCGTCGGCTTCGTCGGCATCGCCGTGGCGCTGAT GGGCCGCAACCACCCGGTGGGCATCATCCTGTCCGCGCTGCTGTTCGGCGCGCTGACCCAGGGCGGCTCCGACCTGTCGT TCGAAAAACCGATGATCACCCGCGAGATGATCCTGTTCATCCAGGGCCTGATCATCCTGTTCTGCGGCGCGCTGGAAAAC CTGTTCGAGCCGTTCATCGCCGGCCTGTTCAAGCGCAAGGACAAGTAA
Upstream 100 bases:
>100_bases TGGGGGGGCACAAGCATTGAAATTCGGACAACCATCCACTCTGCCGCGTTGGGCGCAGCTGACCATCCTGCCGGCGCTCA ACCTGCTGGCCGCCTTACTG
Downstream 100 bases:
>100_bases TATGGAAATGTTCTTCAGTCTTCTCGATTCCACCGTGCGCGTGGCCACGCCGCTGGTGCTGGCCGCGCTGGCCGGCATGT TCTCCGAGCGCTCCGGCGTG
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTGLVTWMIGENPWECLQLLIHGAFGYGEGIGYTLFYTTSFIFAGLSVATAFHAGLFNIGGEGQAYLAGLGVTLVMLGFD HALPPYVLIPLAMLAAMGFGAAWAYIPAYLQAKRGSHIVVTTIMFNFIAYSLMLYLISHQLIEAGSQNPTTRLFAENGWI PQMHELFAFLPNSPLNLSFVFALLAAGLFYLIVWHSRWGFTLRTVGTNEHAAGYAGMSVSRVIIVAMCVSGALVGLASVN DLLGSSHRMNVLFTNGVGFVGIAVALMGRNHPVGIILSALLFGALTQGGSDLSFEKPMITREMILFIQGLIILFCGALEN LFEPFIAGLFKRKDK
Sequences:
>Translated_335_residues MTGLVTWMIGENPWECLQLLIHGAFGYGEGIGYTLFYTTSFIFAGLSVATAFHAGLFNIGGEGQAYLAGLGVTLVMLGFD HALPPYVLIPLAMLAAMGFGAAWAYIPAYLQAKRGSHIVVTTIMFNFIAYSLMLYLISHQLIEAGSQNPTTRLFAENGWI PQMHELFAFLPNSPLNLSFVFALLAAGLFYLIVWHSRWGFTLRTVGTNEHAAGYAGMSVSRVIIVAMCVSGALVGLASVN DLLGSSHRMNVLFTNGVGFVGIAVALMGRNHPVGIILSALLFGALTQGGSDLSFEKPMITREMILFIQGLIILFCGALEN LFEPFIAGLFKRKDK >Mature_334_residues TGLVTWMIGENPWECLQLLIHGAFGYGEGIGYTLFYTTSFIFAGLSVATAFHAGLFNIGGEGQAYLAGLGVTLVMLGFDH ALPPYVLIPLAMLAAMGFGAAWAYIPAYLQAKRGSHIVVTTIMFNFIAYSLMLYLISHQLIEAGSQNPTTRLFAENGWIP QMHELFAFLPNSPLNLSFVFALLAAGLFYLIVWHSRWGFTLRTVGTNEHAAGYAGMSVSRVIIVAMCVSGALVGLASVND LLGSSHRMNVLFTNGVGFVGIAVALMGRNHPVGIILSALLFGALTQGGSDLSFEKPMITREMILFIQGLIILFCGALENL FEPFIAGLFKRKDK
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4603
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR002229 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 36233; Mature: 36102
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLVTWMIGENPWECLQLLIHGAFGYGEGIGYTLFYTTSFIFAGLSVATAFHAGLFNIG CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GEGQAYLAGLGVTLVMLGFDHALPPYVLIPLAMLAAMGFGAAWAYIPAYLQAKRGSHIVV CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEH TTIMFNFIAYSLMLYLISHQLIEAGSQNPTTRLFAENGWIPQMHELFAFLPNSPLNLSFV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHH FALLAAGLFYLIVWHSRWGFTLRTVGTNEHAAGYAGMSVSRVIIVAMCVSGALVGLASVN HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DLLGSSHRMNVLFTNGVGFVGIAVALMGRNHPVGIILSALLFGALTQGGSDLSFEKPMIT HHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH REMILFIQGLIILFCGALENLFEPFIAGLFKRKDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGLVTWMIGENPWECLQLLIHGAFGYGEGIGYTLFYTTSFIFAGLSVATAFHAGLFNIG CCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GEGQAYLAGLGVTLVMLGFDHALPPYVLIPLAMLAAMGFGAAWAYIPAYLQAKRGSHIVV CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEH TTIMFNFIAYSLMLYLISHQLIEAGSQNPTTRLFAENGWIPQMHELFAFLPNSPLNLSFV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHH FALLAAGLFYLIVWHSRWGFTLRTVGTNEHAAGYAGMSVSRVIIVAMCVSGALVGLASVN HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DLLGSSHRMNVLFTNGVGFVGIAVALMGRNHPVGIILSALLFGALTQGGSDLSFEKPMIT HHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH REMILFIQGLIILFCGALENLFEPFIAGLFKRKDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]