| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497799
Identifier: 34497799
GI number: 34497799
Start: 2529278
End: 2529655
Strand: Reverse
Name: 34497799
Synonym: CV_2344
Alternate gene names: NA
Gene position: 2529655-2529278 (Counterclockwise)
Preceding gene: 34497800
Following gene: 34497797
Centisome position: 53.24
GC content: 66.67
Gene sequence:
>378_bases ATGGGCAAATTGCCGTTCAAGCAGGGCCAGCCGGCCTTCACCCCGCTTAGCACTTTCCAACGCTATCCGGAAGCGGAGAT GGTGGAGCGCTCGCGCGCCTTCTACGCCGACATCCGCCGCCGCAAGGCCGTGCGCGCATTCACCGGCCAGCCGGTTCCCC GCGAGGCGATAGAGAACGCGCTGCGCGCCGCCGGCGCCGCTCCATCCGGCGCCAACCGCCAGCCCTGGCATTTCGCCGTC GTCAGCGACCCGGACCAAAACGGAAGATACGGGAAGGCGCATAAAGCCGAGGCACGCGAATTTTATACACACAGGCGCCG CCGGAACGAAAGGACGCGCTGGCACCCCTGGGCACCGACGCCGACAAGCCTTTCCTGA
Upstream 100 bases:
>100_bases CTCTCGTTTGCCGATTGCGCTGCGGCACGGAAAACCGCATCGCCTCCGAAACCGCCGGACCGATGCCCCGGCGACGCAAC ACCCACTCGCAGGAGACGCC
Downstream 100 bases:
>100_bases AAAACGCGCCGTACCTGATCGCCATCTTCGGGCAGAAAAGACCGCGCTGAACGGCGGCAGCGAGATCAAGACCTCCTACG TGCCGGAGTCGGCATCCGCC
Product: oxidoreductase
Products: NA
Alternate protein names: Nitroreductase
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MGKLPFKQGQPAFTPLSTFQRYPEAEMVERSRAFYADIRRRKAVRAFTGQPVPREAIENALRAAGAAPSGANRQPWHFAV VSDPDQNGRYGKAHKAEAREFYTHRRRRNERTRWHPWAPTPTSLS
Sequences:
>Translated_125_residues MGKLPFKQGQPAFTPLSTFQRYPEAEMVERSRAFYADIRRRKAVRAFTGQPVPREAIENALRAAGAAPSGANRQPWHFAV VSDPDQNGRYGKAHKAEAREFYTHRRRRNERTRWHPWAPTPTSLS >Mature_124_residues GKLPFKQGQPAFTPLSTFQRYPEAEMVERSRAFYADIRRRKAVRAFTGQPVPREAIENALRAAGAAPSGANRQPWHFAVV SDPDQNGRYGKAHKAEAREFYTHRRRRNERTRWHPWAPTPTSLS
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42794271, Length=84, Percent_Identity=45.2380952380952, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI257743489, Length=64, Percent_Identity=53.125, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI257743486, Length=68, Percent_Identity=50, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14375; Mature: 14244
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLPFKQGQPAFTPLSTFQRYPEAEMVERSRAFYADIRRRKAVRAFTGQPVPREAIENA CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LRAAGAAPSGANRQPWHFAVVSDPDQNGRYGKAHKAEAREFYTHRRRRNERTRWHPWAPT HHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC PTSLS CCCCC >Mature Secondary Structure GKLPFKQGQPAFTPLSTFQRYPEAEMVERSRAFYADIRRRKAVRAFTGQPVPREAIENA CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LRAAGAAPSGANRQPWHFAVVSDPDQNGRYGKAHKAEAREFYTHRRRRNERTRWHPWAPT HHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC PTSLS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA