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The map label for this gene is recN [H]

Identifier: 34497776

GI number: 34497776

Start: 2511759

End: 2513429

Strand: Reverse

Name: recN [H]

Synonym: CV_2321

Alternate gene names: 34497776

Gene position: 2513429-2511759 (Counterclockwise)

Preceding gene: 34497777

Following gene: 34497775

Centisome position: 52.9

GC content: 68.04

Gene sequence:

>1671_bases
ATGCTTCTCTCGCTGACCGTCAAAGATTTCGTCATCGTCGACAGCATCGCGCTGGACTTTTCCGGCGGCTTCACCGTGCT
CACCGGCGAGACCGGCGCCGGCAAGTCCATCATGCTGGACGCGCTGGGCTTGCTGTTGGGCGATCGCGCCGACGGCACTC
AGGTGCGCGAAGGCGCTGAGCGCGCCGAGATCACCGCGGAGTTCTCCACCGAGAACCGGCCGGAAGTGGACGCCTGGCTG
GATGAGAACGAGTTGTCCGGCGACGAAGGCGTGCTGCTGCTGCGCCGGCTGATAGACCGCGGCGGACGCTCCAAGAGCTT
CGTCAACGGCCAGGCCGCCACCTTGGCCCAGCTCAAGCAGTTGGGGGAATTCCTGGTGGACATCCATGGCCAGCACGCGC
ACCAGTCGCTGATGAAGAGCGAAACCCAGCGCCAGCTGCTGGACGCCTACGCCGGCTCCGCCACGCTGGCGCGCGACACC
CACAAGGCCTGGCAGGAATGGCAGGCCGCGCGCCAGGCGCGGCAGGACGCCGAGCGGATGTCGCGCGAATCCGAAGTGGA
GCGCGAACGGCTCACCTGGCAGATCGGCGAATTGACCGAACTCAATCTGCTGCCCGATGAATGGACCACGCTGAGCCAGA
GCCACACCCGGCTGGCCAACTCCGCCGAACTGGTGCAGAGCGCGCAGCAGGCGGTGGATGTGCTGTCCGAGAACGACGAC
AGCTGCCTGTCCCAGCTCGCCCACGTGCAAAGCCGCCTGTCCAAGCTTTCCAACCTGGATCCGCGCCTGTCCGACACCCT
GTCGCTGCTGGACTCGGTGGACGCCGAATTGCGCGAGGTGGTGTACAGCCTGCGCGACTACGCCAGCGACATCGACCAGG
ACGCGAACCAGCTGGTGGAAATGGAGCGCAGGCTGGATCTCCTGATGAGCACGGCGCGCAAATACCGCGTGCAGCCGGCC
GACCTGGCCGACAAGCTGGCCGACTGGCAGCAGCAGCTGGCCGCGCTGGAGGCCAGCGTGGACGTGGAAGCGCTGAGCGT
GGCGGAGGCCGCCAGCCTCGCCCGCTACCGCGCGCTGGCGGAAGCCCTGTCCGGCAAGCGCCGCCAGGCCGCCAGCGAGC
TGTCCGAGCGCATCTCCGGCGAAATGGGCCGCCTGGCGATGGGCGGCGCCCGCTTCGCCATCGAGCTGTCCGCGCTGGCC
GAACCTGGCGCGCACGGCATGGAGTCGATCGAATACCTGGTGGCCGCCAACGCCGGCACCAGCCTGCGCCCGCTGGCCAA
GGTGGCCTCCGGCGGCGAGCTGTCCCGCATCAGCCTGGCCATGCAGGTGGTGATCAGCCAGGTGGCCAGCGTGCCCACGC
TGATCTTCGACGAAGTGGACGTAGGCATAGGCGGCCGCGTGGCCGAGGTGATAGGCCACATGCTGCGCGACCTGGGCCAG
CGCTACCAGGTGCTGTGCATCACCCACCTGCCCCAGGTGGCGTCATGCGGCAAACACCATTGGCAAGTCAGCAAGCGGGA
ACACAAGGGCCAGGTGCTCAGCAGCATCGCGCCGCTGGACGCCGAACAGCGGGTGCTGGAAATCGCCCGCATGCTGGGCG
GCGTCGAACTCACCCAGACCACGCGCGAACACGCGGCGGAAATGCTGGCCTCCAACGCCGCCGCCCTCTAG

Upstream 100 bases:

>100_bases
CTGCGCATCCTGCACCCCGAGGGCTACAACTACTACGACATGCTGCGCCACAAGCTGCACTGGGGCGAGCGCCTGATCTA
ACCGGAACAGACCACACACC

Downstream 100 bases:

>100_bases
CCAAGCGCGGCGATTCCCGTTAGAATCGCTGGCTCTTATCGAATATGGAAGAGTGGCCGAGCGGTTTAAGGCACTGGTCT
TGAAAACCAGCGATGGGCAA

Product: DNA repair protein recN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MLLSLTVKDFVIVDSIALDFSGGFTVLTGETGAGKSIMLDALGLLLGDRADGTQVREGAERAEITAEFSTENRPEVDAWL
DENELSGDEGVLLLRRLIDRGGRSKSFVNGQAATLAQLKQLGEFLVDIHGQHAHQSLMKSETQRQLLDAYAGSATLARDT
HKAWQEWQAARQARQDAERMSRESEVERERLTWQIGELTELNLLPDEWTTLSQSHTRLANSAELVQSAQQAVDVLSENDD
SCLSQLAHVQSRLSKLSNLDPRLSDTLSLLDSVDAELREVVYSLRDYASDIDQDANQLVEMERRLDLLMSTARKYRVQPA
DLADKLADWQQQLAALEASVDVEALSVAEAASLARYRALAEALSGKRRQAASELSERISGEMGRLAMGGARFAIELSALA
EPGAHGMESIEYLVAANAGTSLRPLAKVASGGELSRISLAMQVVISQVASVPTLIFDEVDVGIGGRVAEVIGHMLRDLGQ
RYQVLCITHLPQVASCGKHHWQVSKREHKGQVLSSIAPLDAEQRVLEIARMLGGVELTQTTREHAAEMLASNAAAL

Sequences:

>Translated_556_residues
MLLSLTVKDFVIVDSIALDFSGGFTVLTGETGAGKSIMLDALGLLLGDRADGTQVREGAERAEITAEFSTENRPEVDAWL
DENELSGDEGVLLLRRLIDRGGRSKSFVNGQAATLAQLKQLGEFLVDIHGQHAHQSLMKSETQRQLLDAYAGSATLARDT
HKAWQEWQAARQARQDAERMSRESEVERERLTWQIGELTELNLLPDEWTTLSQSHTRLANSAELVQSAQQAVDVLSENDD
SCLSQLAHVQSRLSKLSNLDPRLSDTLSLLDSVDAELREVVYSLRDYASDIDQDANQLVEMERRLDLLMSTARKYRVQPA
DLADKLADWQQQLAALEASVDVEALSVAEAASLARYRALAEALSGKRRQAASELSERISGEMGRLAMGGARFAIELSALA
EPGAHGMESIEYLVAANAGTSLRPLAKVASGGELSRISLAMQVVISQVASVPTLIFDEVDVGIGGRVAEVIGHMLRDLGQ
RYQVLCITHLPQVASCGKHHWQVSKREHKGQVLSSIAPLDAEQRVLEIARMLGGVELTQTTREHAAEMLASNAAAL
>Mature_556_residues
MLLSLTVKDFVIVDSIALDFSGGFTVLTGETGAGKSIMLDALGLLLGDRADGTQVREGAERAEITAEFSTENRPEVDAWL
DENELSGDEGVLLLRRLIDRGGRSKSFVNGQAATLAQLKQLGEFLVDIHGQHAHQSLMKSETQRQLLDAYAGSATLARDT
HKAWQEWQAARQARQDAERMSRESEVERERLTWQIGELTELNLLPDEWTTLSQSHTRLANSAELVQSAQQAVDVLSENDD
SCLSQLAHVQSRLSKLSNLDPRLSDTLSLLDSVDAELREVVYSLRDYASDIDQDANQLVEMERRLDLLMSTARKYRVQPA
DLADKLADWQQQLAALEASVDVEALSVAEAASLARYRALAEALSGKRRQAASELSERISGEMGRLAMGGARFAIELSALA
EPGAHGMESIEYLVAANAGTSLRPLAKVASGGELSRISLAMQVVISQVASVPTLIFDEVDVGIGGRVAEVIGHMLRDLGQ
RYQVLCITHLPQVASCGKHHWQVSKREHKGQVLSSIAPLDAEQRVLEIARMLGGVELTQTTREHAAEMLASNAAAL

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=556, Percent_Identity=41.9064748201439, Blast_Score=410, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 60644; Mature: 60644

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSLTVKDFVIVDSIALDFSGGFTVLTGETGAGKSIMLDALGLLLGDRADGTQVREGAE
CEEEEEHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHCHH
RAEITAEFSTENRPEVDAWLDENELSGDEGVLLLRRLIDRGGRSKSFVNGQAATLAQLKQ
HHHEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LGEFLVDIHGQHAHQSLMKSETQRQLLDAYAGSATLARDTHKAWQEWQAARQARQDAERM
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRESEVERERLTWQIGELTELNLLPDEWTTLSQSHTRLANSAELVQSAQQAVDVLSENDD
HHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SCLSQLAHVQSRLSKLSNLDPRLSDTLSLLDSVDAELREVVYSLRDYASDIDQDANQLVE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MERRLDLLMSTARKYRVQPADLADKLADWQQQLAALEASVDVEALSVAEAASLARYRALA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EALSGKRRQAASELSERISGEMGRLAMGGARFAIELSALAEPGAHGMESIEYLVAANAGT
HHHCCHHHHHHHHHHHHHCCCCCCHHCCCCHHEEEEHHHCCCCCCHHHHHHHHHCCCCCC
SLRPLAKVASGGELSRISLAMQVVISQVASVPTLIFDEVDVGIGGRVAEVIGHMLRDLGQ
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
RYQVLCITHLPQVASCGKHHWQVSKREHKGQVLSSIAPLDAEQRVLEIARMLGGVELTQT
HHEEHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH
TREHAAEMLASNAAAL
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLLSLTVKDFVIVDSIALDFSGGFTVLTGETGAGKSIMLDALGLLLGDRADGTQVREGAE
CEEEEEHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHCHH
RAEITAEFSTENRPEVDAWLDENELSGDEGVLLLRRLIDRGGRSKSFVNGQAATLAQLKQ
HHHEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LGEFLVDIHGQHAHQSLMKSETQRQLLDAYAGSATLARDTHKAWQEWQAARQARQDAERM
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRESEVERERLTWQIGELTELNLLPDEWTTLSQSHTRLANSAELVQSAQQAVDVLSENDD
HHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SCLSQLAHVQSRLSKLSNLDPRLSDTLSLLDSVDAELREVVYSLRDYASDIDQDANQLVE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MERRLDLLMSTARKYRVQPADLADKLADWQQQLAALEASVDVEALSVAEAASLARYRALA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EALSGKRRQAASELSERISGEMGRLAMGGARFAIELSALAEPGAHGMESIEYLVAANAGT
HHHCCHHHHHHHHHHHHHCCCCCCHHCCCCHHEEEEHHHCCCCCCHHHHHHHHHCCCCCC
SLRPLAKVASGGELSRISLAMQVVISQVASVPTLIFDEVDVGIGGRVAEVIGHMLRDLGQ
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
RYQVLCITHLPQVASCGKHHWQVSKREHKGQVLSSIAPLDAEQRVLEIARMLGGVELTQT
HHEEHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH
TREHAAEMLASNAAAL
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA