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The map label for this gene is plpC [H]

Identifier: 34497752

GI number: 34497752

Start: 2484308

End: 2485117

Strand: Direct

Name: plpC [H]

Synonym: CV_2297

Alternate gene names: 34497752

Gene position: 2484308-2485117 (Clockwise)

Preceding gene: 34497751

Following gene: 34497753

Centisome position: 52.29

GC content: 62.35

Gene sequence:

>810_bases
ATGCGTAGATTCGTGATCAAGGCAGTTGCCGCATCCGTAGTGGGCCTGGCACTGGCCGGCCAGGTTCTGGCCGCCGACCC
GGCCAAGAAGCAGATCGTCATCGGCACCACCGTCGGCGACTTCGGCGACATGGTCAAACAGTCGATCAAGCCCCAGCTGG
AAAAGCAGGGTTACTCGGTAAAGCTGGTGGAATTCACCGACTACGTGCGTCCGAACCTGGCGCTGCAGGAAGGCTCGCTG
GACGTGAACGTGTTCCAGCACAAACCCTACCTCGACAACTTCGCCAAGGAACACAAGCTTAGCCTGAAGGAAGTGTTCCA
GGTGCCGACCGCGCCGCTGGGGATCTACCCGGGCAAGCTGAAGTCGCTGAAGGACGCGAAACCGGGCGTGACGATCGCCG
CCCCTAACGATCCGTCCAACTTCGCCCGCGCGCTGGTGATGCTGAACGATCTGGGCTGGGTGAAGCTGAAGGCCGGCATC
AATCCGCTGACCGCCTCCGAGCGCGATATCGCCGAAAACATCAAGAAGGTGAAGATCGTGCCGCTGGAGGCCGCCCAGCT
GCCGCGCTCGCGCAGCGACGTGGACTTCGCCGTGATCAACGGCAACTACGCCACCAGCTCCGGCATCAAGCTGACCGACG
CCGTCTACCAGGAAAAGAGCTACGCCTACGTGAACTGGGGCGTGGTGCGCGCGGCCGACGCCGCCAAGCCCTGGGCCAAG
GATGTGGTCTCCGCCTACAACTCCGCGGCGTTCAAGTCCTACACCAAGCAGAAGTTCGCCGGCTACAAGCTGCCGCAGAA
CTGGAACTGA

Upstream 100 bases:

>100_bases
GCTGCTGCTGGTGGTGCTGGTGCAAATCATCCAGCTGCTGGGCAACCGCCTGGCGGCCAAGCTCGACAAACGCTGATTTC
AAAATCTAAAGGAGAGAACA

Downstream 100 bases:

>100_bases
GTTTTTCTTGTAACACTCCTGGCTACAAGACTTGCGGAGGGCTTCGGCCCTCCTTTTTTTATGCCCGCGGCGGGGGCGGG
CATTCCGATGCATTTATATA

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: PLP3 [H]

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRRFVIKAVAASVVGLALAGQVLAADPAKKQIVIGTTVGDFGDMVKQSIKPQLEKQGYSVKLVEFTDYVRPNLALQEGSL
DVNVFQHKPYLDNFAKEHKLSLKEVFQVPTAPLGIYPGKLKSLKDAKPGVTIAAPNDPSNFARALVMLNDLGWVKLKAGI
NPLTASERDIAENIKKVKIVPLEAAQLPRSRSDVDFAVINGNYATSSGIKLTDAVYQEKSYAYVNWGVVRAADAAKPWAK
DVVSAYNSAAFKSYTKQKFAGYKLPQNWN

Sequences:

>Translated_269_residues
MRRFVIKAVAASVVGLALAGQVLAADPAKKQIVIGTTVGDFGDMVKQSIKPQLEKQGYSVKLVEFTDYVRPNLALQEGSL
DVNVFQHKPYLDNFAKEHKLSLKEVFQVPTAPLGIYPGKLKSLKDAKPGVTIAAPNDPSNFARALVMLNDLGWVKLKAGI
NPLTASERDIAENIKKVKIVPLEAAQLPRSRSDVDFAVINGNYATSSGIKLTDAVYQEKSYAYVNWGVVRAADAAKPWAK
DVVSAYNSAAFKSYTKQKFAGYKLPQNWN
>Mature_269_residues
MRRFVIKAVAASVVGLALAGQVLAADPAKKQIVIGTTVGDFGDMVKQSIKPQLEKQGYSVKLVEFTDYVRPNLALQEGSL
DVNVFQHKPYLDNFAKEHKLSLKEVFQVPTAPLGIYPGKLKSLKDAKPGVTIAAPNDPSNFARALVMLNDLGWVKLKAGI
NPLTASERDIAENIKKVKIVPLEAAQLPRSRSDVDFAVINGNYATSSGIKLTDAVYQEKSYAYVNWGVVRAADAAKPWAK
DVVSAYNSAAFKSYTKQKFAGYKLPQNWN

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=259, Percent_Identity=38.6100386100386, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1790093, Length=240, Percent_Identity=34.1666666666667, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 29385; Mature: 29385

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFVIKAVAASVVGLALAGQVLAADPAKKQIVIGTTVGDFGDMVKQSIKPQLEKQGYSV
CCHHHHHHHHHHHHHHHHHCHHEECCCCCCEEEEEECCHHHHHHHHHHHCCHHHHCCCEE
KLVEFTDYVRPNLALQEGSLDVNVFQHKPYLDNFAKEHKLSLKEVFQVPTAPLGIYPGKL
EEEEECCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHH
KSLKDAKPGVTIAAPNDPSNFARALVMLNDLGWVKLKAGINPLTASERDIAENIKKVKIV
HHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHEEEEE
PLEAAQLPRSRSDVDFAVINGNYATSSGIKLTDAVYQEKSYAYVNWGVVRAADAAKPWAK
EECHHHCCCCCCCCEEEEEECCEECCCCCEEHHHHHHCCCEEEEECCEEEECCCCCHHHH
DVVSAYNSAAFKSYTKQKFAGYKLPQNWN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRRFVIKAVAASVVGLALAGQVLAADPAKKQIVIGTTVGDFGDMVKQSIKPQLEKQGYSV
CCHHHHHHHHHHHHHHHHHCHHEECCCCCCEEEEEECCHHHHHHHHHHHCCHHHHCCCEE
KLVEFTDYVRPNLALQEGSLDVNVFQHKPYLDNFAKEHKLSLKEVFQVPTAPLGIYPGKL
EEEEECCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHH
KSLKDAKPGVTIAAPNDPSNFARALVMLNDLGWVKLKAGINPLTASERDIAENIKKVKIV
HHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHEEEEE
PLEAAQLPRSRSDVDFAVINGNYATSSGIKLTDAVYQEKSYAYVNWGVVRAADAAKPWAK
EECHHHCCCCCCCCEEEEEECCEECCCCCEEHHHHHHCCCEEEEECCEEEECCCCCHHHH
DVVSAYNSAAFKSYTKQKFAGYKLPQNWN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8335249; 8406866 [H]