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The map label for this gene is 34497676

Identifier: 34497676

GI number: 34497676

Start: 2395710

End: 2396216

Strand: Reverse

Name: 34497676

Synonym: CV_2221

Alternate gene names: NA

Gene position: 2396216-2395710 (Counterclockwise)

Preceding gene: 34497685

Following gene: 34497671

Centisome position: 50.44

GC content: 62.52

Gene sequence:

>507_bases
ATGCAATCCCCCGGCATTCCCACCAACGAGGCAGAACGCGTCCGGGTGCTGCAAGAGTTGCTGATCCTGGATACCGATCC
GGAAGAACGCTACGACGCGATCACCGCCTACTGCCGCTCCCGCTTCGCAGTCAAGATCGCGCTGATCAGCCTGGTGGACA
GCGACCGCCTGTGGTTCAAATCCCGCTGCGGGCTGGACGCGAGCGAAACGCCGCGCGACATCAGCTTCTGCGCACATGCC
ATTCTCGGCGACGACATCTTGGAAATACCGGACGCCAGCAACGACAACCGCTTCAGTGACAATCCGATGGTGCTTGGCGA
TCCCAATATCCGTTTCTACGCCGGCGCGCCGTTGAAGCTGTCGTCCGGCCACACCATCGGCACGCTGTGCCTGATCGACC
CCAAGCCCAAGCGCCTGGCCGGAGAGGAGAAAAGGCATCTGAAAACGCTGGCGCATACCGTGGTGCTGGAGATAGAGGGC
AGCCGCGCCGTCAGCGAGCCCGGCTGA

Upstream 100 bases:

>100_bases
GTATTATTTATGCTATTAACATTGCAATGGCATCGCGCAATGGCATTACTGCCCGCATCGCCGCCTATACTCACATCACC
CCCCACACCGCGAGGTCATC

Downstream 100 bases:

>100_bases
CCCGCTCGCCGGCTAAGGCTCGGGCCACCTCTGGTAGCCATTCTCGTCGTAGAAAATCTCCGTCAACGCCTCGCCGTTCA
GCTCCAGCCTGACAAAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Diguanylate Cyclase; Signal Transduction Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; GAF Sensor Protein; Two-Component Hybrid Sensor And Regulator; GAF Domain-Containing Protein; Multi-Sensor Signal Transduction Histidine Kinase; GGDEF Domain-Containing Protein; Diguanylate Cyclase With PAS/PAC Sensor; Sensor Protein; PAS Sensor Protein; Histidine Kinase Response Regulator Hybrid Protein; Histidine Kinase-Response Regulator Hybrid Protein; Two-Component Sensor Histidine Kinase; Sensory Box/GGDEF Family Protein; Two-Component System Sensor Histidine Kinase; Sensor Histidine Kinase; GGDEF Domain Protein; GAF Sensor Signal Transduction Histidine Kinase; PAS Fold Family; Diguanylate Cyclase With PAS/PAC And GAF Sensors; Histidine Kinase/Response Regulator Hybrid Protein; GAF Sensor Diguanylate Cyclase; GAF Domain/GGDEF Domain/EAL Domain-Containing Protein; Diguanylate Cyclase/Phosphodiesterase With GAF Sensor; Phytochrome Sensor Protein; Signal Transduction Protein; Diguanylate Phosphodiesterase With GAF Sensor; Sensory Transduction Histidine Kinase; Signaling Protein; PAS/PAC Sensor Protein; ATPase Histidine Kinase- DNA Gyrase B- And; GAF Sensor Hybrid Histidine Kinase; Response Regulator Receiver Domain Protein; HWE Histidine Kinase; GAF Sensor-Containing Diguanylate Cyclase/Phosphodiesterase; GAF Sensor-Containing Diguanylate Cyclase; Pas/Pac Sensor Protein; Stage II Sporulation E Family Protein; Diguanylate Cyclase/Phosphodiesterase; GGDEF GAF Signalling Protein; GAF Domain/GGDEF Domain Protein; Two Component System Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; GAF Domain Protein; Adenylate Cyclase; Sensor Histidine Kinase/GAF Domain-Containing Protein; Histidine Kinase Of HWE Family; GAF/PAS-Family Sensor Histidine Kinase; GGDEF Domain-Containing PAS Signal Transduction Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Two-Component System Sensor Kinase; GAF And Chase3 Sensor Phosphotransfer Protein; FOG GGDEF Domain Protein; Signal Transduction Histidine Kinase-Like Protein; Serine/Threonine Protein Kinase; Cyclic Diguanylate Phosphodiesterase/Diguanylate Cyclase; Diguanylate-Cyclase; Gaf Sensor Signal Transduction Histidine Kinase; GGDEF And GAF Signalling Protein; Phosphodiesterase; GGDEF Family Protein; Sensor Kinase Protein

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MQSPGIPTNEAERVRVLQELLILDTDPEERYDAITAYCRSRFAVKIALISLVDSDRLWFKSRCGLDASETPRDISFCAHA
ILGDDILEIPDASNDNRFSDNPMVLGDPNIRFYAGAPLKLSSGHTIGTLCLIDPKPKRLAGEEKRHLKTLAHTVVLEIEG
SRAVSEPG

Sequences:

>Translated_168_residues
MQSPGIPTNEAERVRVLQELLILDTDPEERYDAITAYCRSRFAVKIALISLVDSDRLWFKSRCGLDASETPRDISFCAHA
ILGDDILEIPDASNDNRFSDNPMVLGDPNIRFYAGAPLKLSSGHTIGTLCLIDPKPKRLAGEEKRHLKTLAHTVVLEIEG
SRAVSEPG
>Mature_168_residues
MQSPGIPTNEAERVRVLQELLILDTDPEERYDAITAYCRSRFAVKIALISLVDSDRLWFKSRCGLDASETPRDISFCAHA
ILGDDILEIPDASNDNRFSDNPMVLGDPNIRFYAGAPLKLSSGHTIGTLCLIDPKPKRLAGEEKRHLKTLAHTVVLEIEG
SRAVSEPG

Specific function: Unknown

COG id: COG2203

COG function: function code T; FOG: GAF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18557; Mature: 18557

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSPGIPTNEAERVRVLQELLILDTDPEERYDAITAYCRSRFAVKIALISLVDSDRLWFK
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCEEH
SRCGLDASETPRDISFCAHAILGDDILEIPDASNDNRFSDNPMVLGDPNIRFYAGAPLKL
HHCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEECCCEEEEECCCEEE
SSGHTIGTLCLIDPKPKRLAGEEKRHLKTLAHTVVLEIEGSRAVSEPG
CCCCEEEEEEEECCCCCHHCCHHHHHHHHHHHEEEEEECCCCCCCCCC
>Mature Secondary Structure
MQSPGIPTNEAERVRVLQELLILDTDPEERYDAITAYCRSRFAVKIALISLVDSDRLWFK
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCEEH
SRCGLDASETPRDISFCAHAILGDDILEIPDASNDNRFSDNPMVLGDPNIRFYAGAPLKL
HHCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEECCCEEEEECCCEEE
SSGHTIGTLCLIDPKPKRLAGEEKRHLKTLAHTVVLEIEGSRAVSEPG
CCCCEEEEEEEECCCCCHHCCHHHHHHHHHHHEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA