| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yycE [H]
Identifier: 34497641
GI number: 34497641
Start: 2359265
End: 2359597
Strand: Reverse
Name: yycE [H]
Synonym: CV_2186
Alternate gene names: 34497641
Gene position: 2359597-2359265 (Counterclockwise)
Preceding gene: 34497642
Following gene: 34497637
Centisome position: 49.66
GC content: 66.07
Gene sequence:
>333_bases ATGTATTGCGAGGGCCTGAACCTGAGGTTGCTGGGCAGCTTCAAGGACCACGACGGCTTCGACGGCGTGATGCTCGGCCT GCCCGGCGCCGGCTACCACCTGGAATTCGTCGTCAGCCATCACCATCCCGTACCGCCCAACCCCACAGTGGAAGACCTGC TGGTGCTGTATCTGTCCGACCACGCCGAATGGGAAGCCGCCTGCGCCTGCATGCGCGCCGCCGGCTTCGCGCAGGTGCCG TCAGCCAACCCGTACTGGGACGCGCACGGCGCCACCTTCGCCGACCATGACGGCTACCGCACCGTGCTGCAGAACGCCAA GAGTCCGGCATAA
Upstream 100 bases:
>100_bases ATGAAAGCGTCCCAACCCGCCCGCCTCCATCGCCATGTACAAGCAAACACCGCATCTCCGGGTCGCGCGCCCGGTCAGCA ACCTGAACCTCAGCAAGGCC
Downstream 100 bases:
>100_bases GGATCATCAGGCGCCCGGCTGCGGATCAGTCAGGCGAGACGGTTGAGCGCTTCGGCCCACGACGGAGAAAATACGCTGGA CACCCTGTCCGGATGCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MYCEGLNLRLLGSFKDHDGFDGVMLGLPGAGYHLEFVVSHHHPVPPNPTVEDLLVLYLSDHAEWEAACACMRAAGFAQVP SANPYWDAHGATFADHDGYRTVLQNAKSPA
Sequences:
>Translated_110_residues MYCEGLNLRLLGSFKDHDGFDGVMLGLPGAGYHLEFVVSHHHPVPPNPTVEDLLVLYLSDHAEWEAACACMRAAGFAQVP SANPYWDAHGATFADHDGYRTVLQNAKSPA >Mature_110_residues MYCEGLNLRLLGSFKDHDGFDGVMLGLPGAGYHLEFVVSHHHPVPPNPTVEDLLVLYLSDHAEWEAACACMRAAGFAQVP SANPYWDAHGATFADHDGYRTVLQNAKSPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 11979; Mature: 11979
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCEGLNLRLLGSFKDHDGFDGVMLGLPGAGYHLEFVVSHHHPVPPNPTVEDLLVLYLSD CCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCC HAEWEAACACMRAAGFAQVPSANPYWDAHGATFADHDGYRTVLQNAKSPA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC >Mature Secondary Structure MYCEGLNLRLLGSFKDHDGFDGVMLGLPGAGYHLEFVVSHHHPVPPNPTVEDLLVLYLSD CCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCC HAEWEAACACMRAAGFAQVPSANPYWDAHGATFADHDGYRTVLQNAKSPA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1312531; 7584024; 9384377 [H]