| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is pabA [H]
Identifier: 34497630
GI number: 34497630
Start: 2348052
End: 2348621
Strand: Reverse
Name: pabA [H]
Synonym: CV_2175
Alternate gene names: 34497630
Gene position: 2348621-2348052 (Counterclockwise)
Preceding gene: 34497631
Following gene: 34497629
Centisome position: 49.43
GC content: 61.93
Gene sequence:
>570_bases ATGCTCCTCGTTATAGATAACTACGATTCCTTCACCTACAACCTGGTGCAGTATTTCGGCGAGCTGGGCCAGGACGTGAA GGTGTTCCGCAACGATGAAATCACGCTGCAGCAGATCGAAGAACTGAAGCCGCAATACCTGGTGGTCTCCCCCGGCCCCT GCACGCCCAACGAGGCGGGCGTGTCGGTTCCGGCCATCCTGCACTTTGCCGGCAAGCTGCCCATCATGGGCGTATGCCTG GGCCACCAGGGCATAGGCCAAGCCTTCGGCGGCAAGGTCGTCCACGCCAAGCAGCTGATGCACGGCAAGGTGTCGCCGGT CAGCCACCTGGACAAAGGCATGTTCCGCGGCCTGCCCAATCCGGTCACCTGCACCCGCTACCATTCGCTGGTGATCGAGC GCGAAACGCTGCCGGACTGCCTGGAAGTCACCGCCTGGACCGACGACGGCGAAATCATGGGCGTGCGCCACAAGACGCTG CCGATCGAGGGCGTGCAGTTCCACCCGGAATCCATTCTCACCGAGCACGGCCACCGCATGCTGGACAACTTCCTGAAGGA ATTCGCCTGA
Upstream 100 bases:
>100_bases CCGACTTAAATGACCAGCTTGCCGTGACCCTGGCGCTTGGAACCCATCGCCAGCGCGATAGACCAAATAGATTCCGCAAG ATATTTGATTTAGGTGAAAA
Downstream 100 bases:
>100_bases TGCGACTGAGGCCGCTGCTGATCGGCGTCCTGCTGGCCGCTCCCGCCTGGTCCGGCGCGCTGGAAGACTGCACGCGAAGC CAGGCCGACACCCCCGCCAT
Product: anthranilate synthase component II
Products: NA
Alternate protein names: Glutamine amido-transferase [H]
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MLLVIDNYDSFTYNLVQYFGELGQDVKVFRNDEITLQQIEELKPQYLVVSPGPCTPNEAGVSVPAILHFAGKLPIMGVCL GHQGIGQAFGGKVVHAKQLMHGKVSPVSHLDKGMFRGLPNPVTCTRYHSLVIERETLPDCLEVTAWTDDGEIMGVRHKTL PIEGVQFHPESILTEHGHRMLDNFLKEFA
Sequences:
>Translated_189_residues MLLVIDNYDSFTYNLVQYFGELGQDVKVFRNDEITLQQIEELKPQYLVVSPGPCTPNEAGVSVPAILHFAGKLPIMGVCL GHQGIGQAFGGKVVHAKQLMHGKVSPVSHLDKGMFRGLPNPVTCTRYHSLVIERETLPDCLEVTAWTDDGEIMGVRHKTL PIEGVQFHPESILTEHGHRMLDNFLKEFA >Mature_189_residues MLLVIDNYDSFTYNLVQYFGELGQDVKVFRNDEITLQQIEELKPQYLVVSPGPCTPNEAGVSVPAILHFAGKLPIMGVCL GHQGIGQAFGGKVVHAKQLMHGKVSPVSHLDKGMFRGLPNPVTCTRYHSLVIERETLPDCLEVTAWTDDGEIMGVRHKTL PIEGVQFHPESILTEHGHRMLDNFLKEFA
Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789760, Length=185, Percent_Identity=64.8648648648649, Blast_Score=268, Evalue=1e-73, Organism=Escherichia coli, GI1787517, Length=187, Percent_Identity=42.2459893048128, Blast_Score=150, Evalue=5e-38, Organism=Escherichia coli, GI1788854, Length=193, Percent_Identity=24.3523316062176, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786215, Length=157, Percent_Identity=27.3885350318471, Blast_Score=62, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322638, Length=185, Percent_Identity=50.2702702702703, Blast_Score=203, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6324361, Length=210, Percent_Identity=33.8095238095238, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 21049; Mature: 21049
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVIDNYDSFTYNLVQYFGELGQDVKVFRNDEITLQQIEELKPQYLVVSPGPCTPNEAG CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCC VSVPAILHFAGKLPIMGVCLGHQGIGQAFGGKVVHAKQLMHGKVSPVSHLDKGMFRGLPN CCHHHHHHHHCCCCEEEEEECCCCCCHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCC PVTCTRYHSLVIERETLPDCLEVTAWTDDGEIMGVRHKTLPIEGVQFHPESILTEHGHRM CEEHHHHHHEEEECCCCCCHHEEEEECCCCCEEEEEECCCCCCCCEECHHHHHHHHHHHH LDNFLKEFA HHHHHHHCC >Mature Secondary Structure MLLVIDNYDSFTYNLVQYFGELGQDVKVFRNDEITLQQIEELKPQYLVVSPGPCTPNEAG CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCC VSVPAILHFAGKLPIMGVCLGHQGIGQAFGGKVVHAKQLMHGKVSPVSHLDKGMFRGLPN CCHHHHHHHHCCCCEEEEEECCCCCCHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCC PVTCTRYHSLVIERETLPDCLEVTAWTDDGEIMGVRHKTLPIEGVQFHPESILTEHGHRM CEEHHHHHHEEEECCCCCCHHEEEEECCCCCEEEEEECCCCCCCCEECHHHHHHHHHHHH LDNFLKEFA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2404959; 659439 [H]