| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497612
Identifier: 34497612
GI number: 34497612
Start: 2334754
End: 2335950
Strand: Direct
Name: 34497612
Synonym: CV_2157
Alternate gene names: NA
Gene position: 2334754-2335950 (Clockwise)
Preceding gene: 34497611
Following gene: 34497613
Centisome position: 49.14
GC content: 61.65
Gene sequence:
>1197_bases ATGTTGAAGCTGAAGAGCGTGCTGCAAAAGGTCGGCCGGAAGCAGGCTGACCTGGCTGAGCACTTGAATGTTTCCCAGGC CACCGTGGCCCAGATCGTCAATCACGGCGAATGGCCCAAGAGCCTGGATGAAACCGACCTGCAGGAGAGCATCCGCCGCT ATCTGCAGGCGCATGGCGCCAGCGATGGGGACATCGACGGCGCATTTGAAGAGGTGAGCGAGCCGCGCGGGAACGCGGCC CGCTCGGTCTCCCAGACGAAAACCGACCAGGAATCCAACCAGGAGGAAACCATGTTACTACGCAAACAGACCTTGTTGCC CGCCACCCGCAAACATTTCAGCTTGTTCCGCGATCCATTTGCAGATGACGCCATTCAGTCCAACGAGGACATGTTCATCA GCCCGGACATCCGCTACGTGCGAGAAGCCATGTTGCAGACGGCCAAGCATGGCGGTCTGCTGGCGGTGGTGGCGGAGTCC GGCGCCGGTAAGACCACGCTGCTGCGCGACCTGGAAGACCGCATTCAGCGCGAGACCCAGCCGATCCAGATCATCAAGCC CTACGTGTTGGCGATGGAGGACAACGACAAGCAGGGCAAAACACTCAAGTCAACCCATATTGCTGAGGCCATCATGGCCG CCGTGGCCCCGCTGGAGAAGCCGAAGAGCAGCCCCGAGGCTCGCTTCGCCCAACTGCACAAGGCGCTGCGCGAAAGCCAT GCCGCAGGGTACCGCCACTGCCTGGTGATTGATGAGGCGCACTCCCTGCCCATCGCCACCCTCAAGCATCTGAAACGCTT CTTCGAACTGGAGCTGGGCTTCAAGAAGCTGCTGTCCATCATCTTGATTGGCCAGCCGGAGCTGAAGCTGAAGCTGTCCG AACGCGATGCGGGAGTGCGCGAGGTGGTGCAGCGCTGCGAAATGGTGGAGCTGGCACCGCTGGAAGGCGCACGCCTGGAG GAGTACCTGAAGTTCAAGCTGGAGCGGCTGAACAAGCCGGTAGCGGAGGTGATTGACGAAGGCGGCATCCACGCGCTGCG CGCCAGGCTGACCATCAACACCAAGCGCCTGGACCGGCCGGAATCCGTATCCCTGCTGTACCCGTTGGCTATCGGGAATC TGCTGACCGCATGCATGAACCTGGCCGCCGAGATTGGCGCCCCGCTGGTGACGGCTGACGTAGTGCGGGAGGTGTGA
Upstream 100 bases:
>100_bases CCGAAGACCAGCTCGCCGCCCTGGTGGCCGAGCTGACCAGCCCGGCAGCGGGCACCAAGTCGCCGCTTCGCGTAGTGAAG TCGGCATAAAGGAGCAAGTC
Downstream 100 bases:
>100_bases CATGCAAACCAACCCGATTCAGGCCAAGCGGCCACCGTTCAATGCCCAAATGATGACGGGTGCAATGAAGGTGGTCCACG CGATAGAAGCGCTGACCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Eha Protein; Sporulation Domain Protein; Type II Secretory Pathway Component ExeA Protein; Helix-Turn-Helix Domain-Containing Protein; ExeA Protein Phage-Like Protein; ExeA Protein; Type II Secretory Pathway Component ExeA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MLKLKSVLQKVGRKQADLAEHLNVSQATVAQIVNHGEWPKSLDETDLQESIRRYLQAHGASDGDIDGAFEEVSEPRGNAA RSVSQTKTDQESNQEETMLLRKQTLLPATRKHFSLFRDPFADDAIQSNEDMFISPDIRYVREAMLQTAKHGGLLAVVAES GAGKTTLLRDLEDRIQRETQPIQIIKPYVLAMEDNDKQGKTLKSTHIAEAIMAAVAPLEKPKSSPEARFAQLHKALRESH AAGYRHCLVIDEAHSLPIATLKHLKRFFELELGFKKLLSIILIGQPELKLKLSERDAGVREVVQRCEMVELAPLEGARLE EYLKFKLERLNKPVAEVIDEGGIHALRARLTINTKRLDRPESVSLLYPLAIGNLLTACMNLAAEIGAPLVTADVVREV
Sequences:
>Translated_398_residues MLKLKSVLQKVGRKQADLAEHLNVSQATVAQIVNHGEWPKSLDETDLQESIRRYLQAHGASDGDIDGAFEEVSEPRGNAA RSVSQTKTDQESNQEETMLLRKQTLLPATRKHFSLFRDPFADDAIQSNEDMFISPDIRYVREAMLQTAKHGGLLAVVAES GAGKTTLLRDLEDRIQRETQPIQIIKPYVLAMEDNDKQGKTLKSTHIAEAIMAAVAPLEKPKSSPEARFAQLHKALRESH AAGYRHCLVIDEAHSLPIATLKHLKRFFELELGFKKLLSIILIGQPELKLKLSERDAGVREVVQRCEMVELAPLEGARLE EYLKFKLERLNKPVAEVIDEGGIHALRARLTINTKRLDRPESVSLLYPLAIGNLLTACMNLAAEIGAPLVTADVVREV >Mature_398_residues MLKLKSVLQKVGRKQADLAEHLNVSQATVAQIVNHGEWPKSLDETDLQESIRRYLQAHGASDGDIDGAFEEVSEPRGNAA RSVSQTKTDQESNQEETMLLRKQTLLPATRKHFSLFRDPFADDAIQSNEDMFISPDIRYVREAMLQTAKHGGLLAVVAES GAGKTTLLRDLEDRIQRETQPIQIIKPYVLAMEDNDKQGKTLKSTHIAEAIMAAVAPLEKPKSSPEARFAQLHKALRESH AAGYRHCLVIDEAHSLPIATLKHLKRFFELELGFKKLLSIILIGQPELKLKLSERDAGVREVVQRCEMVELAPLEGARLE EYLKFKLERLNKPVAEVIDEGGIHALRARLTINTKRLDRPESVSLLYPLAIGNLLTACMNLAAEIGAPLVTADVVREV
Specific function: Unknown
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44374; Mature: 44374
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLKSVLQKVGRKQADLAEHLNVSQATVAQIVNHGEWPKSLDETDLQESIRRYLQAHGA CCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC SDGDIDGAFEEVSEPRGNAARSVSQTKTDQESNQEETMLLRKQTLLPATRKHFSLFRDPF CCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCC ADDAIQSNEDMFISPDIRYVREAMLQTAKHGGLLAVVAESGAGKTTLLRDLEDRIQRETQ CCHHHCCCCCEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC PIQIIKPYVLAMEDNDKQGKTLKSTHIAEAIMAAVAPLEKPKSSPEARFAQLHKALRESH CCEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AAGYRHCLVIDEAHSLPIATLKHLKRFFELELGFKKLLSIILIGQPELKLKLSERDAGVR CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH EVVQRCEMVELAPLEGARLEEYLKFKLERLNKPVAEVIDEGGIHALRARLTINTKRLDRP HHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHEEHHEEEECHHHCCCC ESVSLLYPLAIGNLLTACMNLAAEIGAPLVTADVVREV CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MLKLKSVLQKVGRKQADLAEHLNVSQATVAQIVNHGEWPKSLDETDLQESIRRYLQAHGA CCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC SDGDIDGAFEEVSEPRGNAARSVSQTKTDQESNQEETMLLRKQTLLPATRKHFSLFRDPF CCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCC ADDAIQSNEDMFISPDIRYVREAMLQTAKHGGLLAVVAESGAGKTTLLRDLEDRIQRETQ CCHHHCCCCCEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC PIQIIKPYVLAMEDNDKQGKTLKSTHIAEAIMAAVAPLEKPKSSPEARFAQLHKALRESH CCEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AAGYRHCLVIDEAHSLPIATLKHLKRFFELELGFKKLLSIILIGQPELKLKLSERDAGVR CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH EVVQRCEMVELAPLEGARLEEYLKFKLERLNKPVAEVIDEGGIHALRARLTINTKRLDRP HHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHEEHHEEEECHHHCCCC ESVSLLYPLAIGNLLTACMNLAAEIGAPLVTADVVREV CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA