| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497605
Identifier: 34497605
GI number: 34497605
Start: 2329784
End: 2330272
Strand: Reverse
Name: 34497605
Synonym: CV_2150
Alternate gene names: NA
Gene position: 2330272-2329784 (Counterclockwise)
Preceding gene: 34497607
Following gene: 34497604
Centisome position: 49.05
GC content: 51.94
Gene sequence:
>489_bases GTGGGACGGTGTGACTTGATTATGGTAACTAAAAAGTTACCTGTCAATCTGATTGGAGAGCTTTTAGTGTCTATTGGTGA ACGCCTGAGGGAAGAGCGCGAGCGTTTAGGCTTCACGCAGCCCGCTTTTGCTGGGTTGGCAGAAACAACCAAAAAAAGTC AGATTGACTATGAGAAGGACGTGACCCAACCCAAGGCGGGCTATCTAGCCGCAATCACAAAAGTTGGGGCCGATGTGCAG TACATCGTGACTGGTATGCGTTCTGCCCAAGCTCTCTCAAGCGATGAGCAGGAGTTACTAGCACTGTTCCGCGCGGCACC CCTTGAAGTGAAAGCGACCATCGTCGCAGGCTTGAAAGGAGGCGTTCGGCCATCGTCCGGCAGTAAGATTTCAGTCGGCG GCAGCTTCCATGGTCAAGTAGTTGAGGGCGATGTCACTAATACGGTCTCTGGTGGCATGCACATAGGTGGAAAAACCGGA GAGAAGTAA
Upstream 100 bases:
>100_bases AGCTCGGCTCGGGCCTCTTCGGGGGTGCGTAGTTGCATGGATAGCTCCTGGTTAAGGGGCGGCGGCGCTTAGGAGAGTGC CGCTTAAGTTGCCGTTCGTG
Downstream 100 bases:
>100_bases ATCTGTACGTAGTCGAATTGTCCTGAATGACAGGTGCAATTTTTGGTAAAGCTGGTAGCGTAGTTAGCTCGAAGAGGCTG GCGGATGGCTTCGTTCCATT
Product: transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MGRCDLIMVTKKLPVNLIGELLVSIGERLREERERLGFTQPAFAGLAETTKKSQIDYEKDVTQPKAGYLAAITKVGADVQ YIVTGMRSAQALSSDEQELLALFRAAPLEVKATIVAGLKGGVRPSSGSKISVGGSFHGQVVEGDVTNTVSGGMHIGGKTG EK
Sequences:
>Translated_162_residues MGRCDLIMVTKKLPVNLIGELLVSIGERLREERERLGFTQPAFAGLAETTKKSQIDYEKDVTQPKAGYLAAITKVGADVQ YIVTGMRSAQALSSDEQELLALFRAAPLEVKATIVAGLKGGVRPSSGSKISVGGSFHGQVVEGDVTNTVSGGMHIGGKTG EK >Mature_161_residues GRCDLIMVTKKLPVNLIGELLVSIGERLREERERLGFTQPAFAGLAETTKKSQIDYEKDVTQPKAGYLAAITKVGADVQY IVTGMRSAQALSSDEQELLALFRAAPLEVKATIVAGLKGGVRPSSGSKISVGGSFHGQVVEGDVTNTVSGGMHIGGKTGE K
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17103; Mature: 16972
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRCDLIMVTKKLPVNLIGELLVSIGERLREERERLGFTQPAFAGLAETTKKSQIDYEKD CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHH VTQPKAGYLAAITKVGADVQYIVTGMRSAQALSSDEQELLALFRAAPLEVKATIVAGLKG CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHEEECCCC GVRPSSGSKISVGGSFHGQVVEGDVTNTVSGGMHIGGKTGEK CCCCCCCCEEEECCCCCCEEEECCCCCCCCCCEEECCCCCCC >Mature Secondary Structure GRCDLIMVTKKLPVNLIGELLVSIGERLREERERLGFTQPAFAGLAETTKKSQIDYEKD CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHH VTQPKAGYLAAITKVGADVQYIVTGMRSAQALSSDEQELLALFRAAPLEVKATIVAGLKG CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHEEECCCC GVRPSSGSKISVGGSFHGQVVEGDVTNTVSGGMHIGGKTGEK CCCCCCCCEEEECCCCCCEEEECCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA