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The map label for this gene is 34497595

Identifier: 34497595

GI number: 34497595

Start: 2323725

End: 2325326

Strand: Reverse

Name: 34497595

Synonym: CV_2140

Alternate gene names: NA

Gene position: 2325326-2323725 (Counterclockwise)

Preceding gene: 34497596

Following gene: 34497594

Centisome position: 48.94

GC content: 64.73

Gene sequence:

>1602_bases
ATGGCCCAGCCACCGCTCAAGCCGCTGGGCGCGCCGCGCAAGATCGACCTGGCCGAAGAGATGGAGCTGGCCGGCGTGGT
GGTGCCGCAGGACGTGGCCGATGCCATCCCGGCCGAACAGCCGGTGTTTCTGCCGTACCAGCAGCGCTGGTTCGAGGACG
AAGCCCAGATCATGTTCGCGGAGAAGAGCCGCCGCACCGGCCTTACCTGGGCGGAGGCCGGCCGCAACGTGGTCAAGGCC
GCCCGGCCGCGCCGGCGCCAGGGCTGCAATACCTTTTACGTGGGCAGCAAGAAGGAAATGGCGCTGGAGTACATCGCCGC
CTGCGCACTGTTCGCCAAGGCCTTCAACGAGCTGGCCCAGGCCGATGTCTACGAGCAAAGCTTTTGGGACGAAGGCAAGC
AGGAGGAAATCCTCACCTACATGATTCGCTTCCCCAAGAGCGGTTTCAAAATCCAGGCGCTGTCCAGCCGGCCGTCCAAT
CTGCGCGGCCTGCAGGGCGATGTGGTGATCGACGAGGCGGCTTTCCACGACTCGCTGGAGGAACTGCTCAAAGCGGCGCT
GGCGCTGACCATGTGGGGCAACAAGGTGCGGCTGATCAGCACCCACAACGGCGTCGAAAACCTGTTCAACCAGTACATTC
AGGAAGCGCGCGAGGGGCGCAAGGACTACAGCATTCACCGCATCACCCTGGATGACGCCATCGCCGATGGCCTGTACCAG
CGCATCTGCTACGTCACTGGCCAGATCTGGTCGCCGGAGGCGGAAAAGAAATGGCGCGACGACCTGTACCGCAATGCGCC
GAATAGGGAGTCGGCCGACGAAGAATATGGCTGCATCCCCAAGCACAGCGGCGGCGCCTGGCTGTCCAGAGCACTGATCG
AATCCCGCATGTCAGCCGATACGCCGGTATTGCGCTATGCCTGCCCGAATGGCTTCGAGCTGCTGTCTGACCATGTCCGC
CATGCCGAGTGCAGCGACTGGCTGGAGGTCAACTTGGCGCCCTTGCTGACCCAACTGCCTGTCGACGCCATCAGCTTCAA
CGGCGAAGACTTCGGCCGCACCGGCGACCTGTCGGTGCATGTGCCGCTGATCCAGCAGCAGAACCTGGTGCGCCGGGTGC
CGTTCATCCTGGAGCTGCGCAATGTGCCGTTCCGCCAGCAAGAGCAGATCGCCTTTTACCTACTGGACCGCCTGCCGCGC
TTCATGGGCGGCGCCTTCGACGCCCGCGGCAACGGTCACGCCTTGGCTGAGTTCGCCATGCAACGCTACGGCGCCAGCCG
CATCCAGCAAGTGATGTTGACCGAGAGCTGGTACCGCGAGCATATGCCGCCGCTGAAGGCGGCGCTGGAAGATGGCGACC
TGGTAGACCTGCCCAGGGACGCCGACATCCTGGCTGACCTGCGCGCCGTCCAGGTCATCAAGGGCGTGCCGCGCATCCCG
GATGTGCGCACAACTGGCGAAGACCAGGGCAAGCGCCACGGCGACGCCGCGGTGGCGCTTGCCCTGGCGTACTACGCCAG
CCGTGAACTCAACAAAGGCCCGGTGTCGGTGAAGTCACGCCGCCGCCGCACCGCCACCCGCATCACACAGGGGTACGCAT
GA

Upstream 100 bases:

>100_bases
TGGCCGAACAGGAAGAAAAGCTGGAAGAACTTCGCGGTGCCGATGGCATGAGCGAGCAGATGGAATCCCGTATTCGTCGC
ATCCTGCTGGGGAAAGAATG

Downstream 100 bases:

>100_bases
AAGCAAAGGGCATGTGGGTCAGCCCCACCGAGTTCGTCCAGTTCGGCGAATCGAGCTCCAGCCTGTCCAGCCAGATCGCC
ACCCGCTCCAGGAGCATCGA

Product: portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MAQPPLKPLGAPRKIDLAEEMELAGVVVPQDVADAIPAEQPVFLPYQQRWFEDEAQIMFAEKSRRTGLTWAEAGRNVVKA
ARPRRRQGCNTFYVGSKKEMALEYIAACALFAKAFNELAQADVYEQSFWDEGKQEEILTYMIRFPKSGFKIQALSSRPSN
LRGLQGDVVIDEAAFHDSLEELLKAALALTMWGNKVRLISTHNGVENLFNQYIQEAREGRKDYSIHRITLDDAIADGLYQ
RICYVTGQIWSPEAEKKWRDDLYRNAPNRESADEEYGCIPKHSGGAWLSRALIESRMSADTPVLRYACPNGFELLSDHVR
HAECSDWLEVNLAPLLTQLPVDAISFNGEDFGRTGDLSVHVPLIQQQNLVRRVPFILELRNVPFRQQEQIAFYLLDRLPR
FMGGAFDARGNGHALAEFAMQRYGASRIQQVMLTESWYREHMPPLKAALEDGDLVDLPRDADILADLRAVQVIKGVPRIP
DVRTTGEDQGKRHGDAAVALALAYYASRELNKGPVSVKSRRRRTATRITQGYA

Sequences:

>Translated_533_residues
MAQPPLKPLGAPRKIDLAEEMELAGVVVPQDVADAIPAEQPVFLPYQQRWFEDEAQIMFAEKSRRTGLTWAEAGRNVVKA
ARPRRRQGCNTFYVGSKKEMALEYIAACALFAKAFNELAQADVYEQSFWDEGKQEEILTYMIRFPKSGFKIQALSSRPSN
LRGLQGDVVIDEAAFHDSLEELLKAALALTMWGNKVRLISTHNGVENLFNQYIQEAREGRKDYSIHRITLDDAIADGLYQ
RICYVTGQIWSPEAEKKWRDDLYRNAPNRESADEEYGCIPKHSGGAWLSRALIESRMSADTPVLRYACPNGFELLSDHVR
HAECSDWLEVNLAPLLTQLPVDAISFNGEDFGRTGDLSVHVPLIQQQNLVRRVPFILELRNVPFRQQEQIAFYLLDRLPR
FMGGAFDARGNGHALAEFAMQRYGASRIQQVMLTESWYREHMPPLKAALEDGDLVDLPRDADILADLRAVQVIKGVPRIP
DVRTTGEDQGKRHGDAAVALALAYYASRELNKGPVSVKSRRRRTATRITQGYA
>Mature_532_residues
AQPPLKPLGAPRKIDLAEEMELAGVVVPQDVADAIPAEQPVFLPYQQRWFEDEAQIMFAEKSRRTGLTWAEAGRNVVKAA
RPRRRQGCNTFYVGSKKEMALEYIAACALFAKAFNELAQADVYEQSFWDEGKQEEILTYMIRFPKSGFKIQALSSRPSNL
RGLQGDVVIDEAAFHDSLEELLKAALALTMWGNKVRLISTHNGVENLFNQYIQEAREGRKDYSIHRITLDDAIADGLYQR
ICYVTGQIWSPEAEKKWRDDLYRNAPNRESADEEYGCIPKHSGGAWLSRALIESRMSADTPVLRYACPNGFELLSDHVRH
AECSDWLEVNLAPLLTQLPVDAISFNGEDFGRTGDLSVHVPLIQQQNLVRRVPFILELRNVPFRQQEQIAFYLLDRLPRF
MGGAFDARGNGHALAEFAMQRYGASRIQQVMLTESWYREHMPPLKAALEDGDLVDLPRDADILADLRAVQVIKGVPRIPD
VRTTGEDQGKRHGDAAVALALAYYASRELNKGPVSVKSRRRRTATRITQGYA

Specific function: Unknown

COG id: COG4373

COG function: function code R; Mu-like prophage FluMu protein gp28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp28 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004921
- InterPro:   IPR012036 [H]

Pfam domain/function: PF03237 Terminase_6 [H]

EC number: NA

Molecular weight: Translated: 60192; Mature: 60061

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQPPLKPLGAPRKIDLAEEMELAGVVVPQDVADAIPAEQPVFLPYQQRWFEDEAQIMFA
CCCCCCCCCCCCCCCCHHHHHHHCCEECCHHHHHHCCCCCCEECCHHHHHCCCCHHEEEE
EKSRRTGLTWAEAGRNVVKAARPRRRQGCNTFYVGSKKEMALEYIAACALFAKAFNELAQ
HHCCCCCCCHHHHCHHHHHHCCCHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
ADVYEQSFWDEGKQEEILTYMIRFPKSGFKIQALSSRPSNLRGLQGDVVIDEAAFHDSLE
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHH
ELLKAALALTMWGNKVRLISTHNGVENLFNQYIQEAREGRKDYSIHRITLDDAIADGLYQ
HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH
RICYVTGQIWSPEAEKKWRDDLYRNAPNRESADEEYGCIPKHSGGAWLSRALIESRMSAD
HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
TPVLRYACPNGFELLSDHVRHAECSDWLEVNLAPLLTQLPVDAISFNGEDFGRTGDLSVH
CCEEEEECCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCHHEECCCCCCCCCCCCEEE
VPLIQQQNLVRRVPFILELRNVPFRQQEQIAFYLLDRLPRFMGGAFDARGNGHALAEFAM
ECHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
QRYGASRIQQVMLTESWYREHMPPLKAALEDGDLVDLPRDADILADLRAVQVIKGVPRIP
HHHCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCC
DVRTTGEDQGKRHGDAAVALALAYYASRELNKGPVSVKSRRRRTATRITQGYA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AQPPLKPLGAPRKIDLAEEMELAGVVVPQDVADAIPAEQPVFLPYQQRWFEDEAQIMFA
CCCCCCCCCCCCCCCHHHHHHHCCEECCHHHHHHCCCCCCEECCHHHHHCCCCHHEEEE
EKSRRTGLTWAEAGRNVVKAARPRRRQGCNTFYVGSKKEMALEYIAACALFAKAFNELAQ
HHCCCCCCCHHHHCHHHHHHCCCHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
ADVYEQSFWDEGKQEEILTYMIRFPKSGFKIQALSSRPSNLRGLQGDVVIDEAAFHDSLE
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHH
ELLKAALALTMWGNKVRLISTHNGVENLFNQYIQEAREGRKDYSIHRITLDDAIADGLYQ
HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH
RICYVTGQIWSPEAEKKWRDDLYRNAPNRESADEEYGCIPKHSGGAWLSRALIESRMSAD
HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
TPVLRYACPNGFELLSDHVRHAECSDWLEVNLAPLLTQLPVDAISFNGEDFGRTGDLSVH
CCEEEEECCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCHHEECCCCCCCCCCCCEEE
VPLIQQQNLVRRVPFILELRNVPFRQQEQIAFYLLDRLPRFMGGAFDARGNGHALAEFAM
ECHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
QRYGASRIQQVMLTESWYREHMPPLKAALEDGDLVDLPRDADILADLRAVQVIKGVPRIP
HHHCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCC
DVRTTGEDQGKRHGDAAVALALAYYASRELNKGPVSVKSRRRRTATRITQGYA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]