| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497561
Identifier: 34497561
GI number: 34497561
Start: 2298053
End: 2298631
Strand: Direct
Name: 34497561
Synonym: CV_2106
Alternate gene names: NA
Gene position: 2298053-2298631 (Clockwise)
Preceding gene: 34497560
Following gene: 34497562
Centisome position: 48.37
GC content: 60.1
Gene sequence:
>579_bases TTGACAGAAATTTCGGAAATTACTATCTTCCAGATCATGGAACTGACACCTGTAAGCCAAAGATTCGTACTGCACTGGGG CGAGATGGGCACCCGCTGGGGCGTCAACCGCACCGTCGCCCAGATTCACGCCTTACTGTTCATCAGCGGCCGCGCGATGT GCGCGGAAGAGCTGGCGGAGACGCTGAACGTCGCCCGCTCCAATGTCAGCAACAGTCTGAAGGAGCTGCAAGGCTGGAAA CTGATCCGCAATGTCCATGTGCTCGGCGACCGCCGCGATCATTTCGAAACCTCGGGAGACGTGTGGGAGCTGTTCCGCAT CATCGTCGCCGAGCGGCAGCGGCGCGAGATCGAACCGACGCTGCAGGTGCTGCGCGAATGCATGGAGAGTCCTGAGTTCA AGCTGGAGAGCCCGCTGGCGCAGCAAAGGATACGTAATACCTGGCAATTCATGGACACCTTGACCGCGTGGACGCGGGAA ATGCTGCGCCTGTCCACGGCTACGCTGAGCAAGGTGCTGAAAATGGGCGCCGGCATCCAGAAGCTGCTGGGCCGGGGCAA GCCGGATGCCGACGAGTGA
Upstream 100 bases:
>100_bases GAGAGAGCCGCTGGCCGGGGCGCCCAGGCAGGTGGCGCTGGCCGGCTAGGGAAAGGGGGCATGGCGGGGGCACGGCCTGT TTTGTTTGTAAATTTCTCTA
Downstream 100 bases:
>100_bases GCTGCTGAGGTGCAGGGTTCCGAGAGGGCGCTGGCGCGGATGCGAACGATGGCCAGCCGTCTTGGCTGGCATGAGGATTT TTTTGACCATTAATTTCTGT
Product: transcriptional regulator
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator; Transcriptional Regulator-Like Protein; Helix-Turn-Helix Type; Regulatory Protein ArsR; Transcriptional Regulatory Protein; Transcriptional Regulator Arsr Family; Transcriptional Regulators-Like Protein; ArsR-Family Transcriptional Regulator; Transcriptional Regulator Trmb; Transcription Regulator Protein; HTH Domain Family; Transcriptional Regulator ArsR Family; Transcriptional Regulators-Like; Transcriptional Regulator Protein-Like Protein
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTEISEITIFQIMELTPVSQRFVLHWGEMGTRWGVNRTVAQIHALLFISGRAMCAEELAETLNVARSNVSNSLKELQGWK LIRNVHVLGDRRDHFETSGDVWELFRIIVAERQRREIEPTLQVLRECMESPEFKLESPLAQQRIRNTWQFMDTLTAWTRE MLRLSTATLSKVLKMGAGIQKLLGRGKPDADE
Sequences:
>Translated_192_residues MTEISEITIFQIMELTPVSQRFVLHWGEMGTRWGVNRTVAQIHALLFISGRAMCAEELAETLNVARSNVSNSLKELQGWK LIRNVHVLGDRRDHFETSGDVWELFRIIVAERQRREIEPTLQVLRECMESPEFKLESPLAQQRIRNTWQFMDTLTAWTRE MLRLSTATLSKVLKMGAGIQKLLGRGKPDADE >Mature_191_residues TEISEITIFQIMELTPVSQRFVLHWGEMGTRWGVNRTVAQIHALLFISGRAMCAEELAETLNVARSNVSNSLKELQGWKL IRNVHVLGDRRDHFETSGDVWELFRIIVAERQRREIEPTLQVLRECMESPEFKLESPLAQQRIRNTWQFMDTLTAWTREM LRLSTATLSKVLKMGAGIQKLLGRGKPDADE
Specific function: Unknown
COG id: COG1510
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22165; Mature: 22034
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEISEITIFQIMELTPVSQRFVLHWGEMGTRWGVNRTVAQIHALLFISGRAMCAEELAE CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH TLNVARSNVSNSLKELQGWKLIRNVHVLGDRRDHFETSGDVWELFRIIVAERQRREIEPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHH LQVLRECMESPEFKLESPLAQQRIRNTWQFMDTLTAWTREMLRLSTATLSKVLKMGAGIQ HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH KLLGRGKPDADE HHHCCCCCCCCC >Mature Secondary Structure TEISEITIFQIMELTPVSQRFVLHWGEMGTRWGVNRTVAQIHALLFISGRAMCAEELAE CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH TLNVARSNVSNSLKELQGWKLIRNVHVLGDRRDHFETSGDVWELFRIIVAERQRREIEPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHH LQVLRECMESPEFKLESPLAQQRIRNTWQFMDTLTAWTREMLRLSTATLSKVLKMGAGIQ HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH KLLGRGKPDADE HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA