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The map label for this gene is tldD [H]

Identifier: 34497553

GI number: 34497553

Start: 2288697

End: 2290139

Strand: Direct

Name: tldD [H]

Synonym: CV_2098

Alternate gene names: 34497553

Gene position: 2288697-2290139 (Clockwise)

Preceding gene: 34497552

Following gene: 34497554

Centisome position: 48.17

GC content: 68.26

Gene sequence:

>1443_bases
ATGCAAGACGCCTTCACCATCGCAGACGAACTGCTGCTCAAGCCCTACGGCCTGGACGAGGCCGCGCTGGAGCGCACGCT
GTCGCATATGCGCCATCACGCCGTTGACTACGCCGACCTTTACTTCCAGTACACCCGCAACGAGGGCTGGCATCTGGAAG
AGGGCATCGTCAAGTCCGGCAGCTTCAGCATCGATCAGGGTGTCGGCGTGCGCGCCGTCGCCGGAGACAAGACGGCCTTC
GCCTATTCCGACGCCATCAACCAGGATGCGCTCACCCGCGCGGCCGAGGCGGTGCGCGCGATCGGCAATGCCGGCGGCGA
CGGCAGCGCCGGCGCGGTGGAAAAGCGCAGGCCGCAGTCGCTGTACCCGGCCATCGACCCCTGTCACAGCCTGGAGGCCG
CCGCCAAGGTGGCGCTGCTGGAAAAGGTGGAAAAGCTGGCCAAGGCGATAGACCCGCGCGTGATTCAGGTGATGGCCGGC
CTGGCGATGGAGTACGACGTGGTCTACGTCGCGCGCCATGACGGCGTGCGCGCCGCCGACGTGAGGCCGCTGGTGCGGAT
GTCGGTGTCGGTGATCGCCGAACAGAACGGCCGCCGCGAGCAGGGCGCGTCCGGCGGCGGCGGCCGCTTCGACCTCGCCT
ATTTCGACGACGCGGTGGTGGAACGCTATGTGCGCGAGGCGGTCAAGCAGGCGCTGGTGAATCTGGAATCCCGCCCGGCG
CCGGCGGGCCAGATGACCGTGGTGCTGGGGCCGGGCTGGCCGGGCGTGCTGCTGCACGAGGCGATCGGCCATGGCCTGGA
AGGCGATTTCAACCGCAAGGGCACCTCGGCCTTCTCCGGCAAGATGGGCGAACGCGTGGCGGCGCCGGGCGTGACGGTGG
TGGACGATGGCGTGATGGGCGGCCGCCGCGGCGCGCTGGCCATCGACGACGAGGGCAACGCCACCCAGCGCACCGTGCTG
ATCGAGGACGGCATCCTCAAGGGCTATATGCAGGACGCGATGAATTCGCGGCTGATGCAGGTGGCGCCCACCGGTAACGG
CCGCCGCGAGTCGTACGCCAGCATTCCGATGCCGCGGATGACCAATACCTACATGCTGGCCGGCGAGCGCGATCCGCAGG
AAATCATCGCCTCGGTCAAGGATGGCCTGTACGCGGTGAATTTCGGCGGCGGGCAGGTGGACATCACCAGCGGCAAGTTC
GTGTTCTCGGCGTCGGAAGCCTGGCGCATCGAAAATGGCAAGCTGACCTACCCGGTCAAGGGCGCCACGCTGATCGGCAG
CGGCCCCGAGGTGCTGAACTACGTGTCGATGATAGGCAACGACCTGGCCCTGGACCAGGGCGTGGGCGTGTGCGGCAAGG
AAGGGCAAAGCGTGCCGGTCGGCGTCGGCCAGCCGACGCTGCGCATAGACGGCGGGCTGACCGTCGGCGGCACGGGCGGC
TGA

Upstream 100 bases:

>100_bases
GCGAGGGCGTCATCACCGCCGAGATCGATCCCGAATGGACGGATTCGGTGCGGAGCCGCCTGCCGGCTCTGGCGCACCGG
GTCATACGCTGAAAGAGAAT

Downstream 100 bases:

>100_bases
TTGTTGTCTGCCGCGGCCGGGCAGCAGCCCGGCCGTTTCACATCAAAGCGGGATGCCTTGCGTCTCGAGCGCGAGCGCCA
GCCTGTCCAGGCCAATGCCG

Product: tldD protein family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MQDAFTIADELLLKPYGLDEAALERTLSHMRHHAVDYADLYFQYTRNEGWHLEEGIVKSGSFSIDQGVGVRAVAGDKTAF
AYSDAINQDALTRAAEAVRAIGNAGGDGSAGAVEKRRPQSLYPAIDPCHSLEAAAKVALLEKVEKLAKAIDPRVIQVMAG
LAMEYDVVYVARHDGVRAADVRPLVRMSVSVIAEQNGRREQGASGGGGRFDLAYFDDAVVERYVREAVKQALVNLESRPA
PAGQMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSAFSGKMGERVAAPGVTVVDDGVMGGRRGALAIDDEGNATQRTVL
IEDGILKGYMQDAMNSRLMQVAPTGNGRRESYASIPMPRMTNTYMLAGERDPQEIIASVKDGLYAVNFGGGQVDITSGKF
VFSASEAWRIENGKLTYPVKGATLIGSGPEVLNYVSMIGNDLALDQGVGVCGKEGQSVPVGVGQPTLRIDGGLTVGGTGG

Sequences:

>Translated_480_residues
MQDAFTIADELLLKPYGLDEAALERTLSHMRHHAVDYADLYFQYTRNEGWHLEEGIVKSGSFSIDQGVGVRAVAGDKTAF
AYSDAINQDALTRAAEAVRAIGNAGGDGSAGAVEKRRPQSLYPAIDPCHSLEAAAKVALLEKVEKLAKAIDPRVIQVMAG
LAMEYDVVYVARHDGVRAADVRPLVRMSVSVIAEQNGRREQGASGGGGRFDLAYFDDAVVERYVREAVKQALVNLESRPA
PAGQMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSAFSGKMGERVAAPGVTVVDDGVMGGRRGALAIDDEGNATQRTVL
IEDGILKGYMQDAMNSRLMQVAPTGNGRRESYASIPMPRMTNTYMLAGERDPQEIIASVKDGLYAVNFGGGQVDITSGKF
VFSASEAWRIENGKLTYPVKGATLIGSGPEVLNYVSMIGNDLALDQGVGVCGKEGQSVPVGVGQPTLRIDGGLTVGGTGG
>Mature_480_residues
MQDAFTIADELLLKPYGLDEAALERTLSHMRHHAVDYADLYFQYTRNEGWHLEEGIVKSGSFSIDQGVGVRAVAGDKTAF
AYSDAINQDALTRAAEAVRAIGNAGGDGSAGAVEKRRPQSLYPAIDPCHSLEAAAKVALLEKVEKLAKAIDPRVIQVMAG
LAMEYDVVYVARHDGVRAADVRPLVRMSVSVIAEQNGRREQGASGGGGRFDLAYFDDAVVERYVREAVKQALVNLESRPA
PAGQMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSAFSGKMGERVAAPGVTVVDDGVMGGRRGALAIDDEGNATQRTVL
IEDGILKGYMQDAMNSRLMQVAPTGNGRRESYASIPMPRMTNTYMLAGERDPQEIIASVKDGLYAVNFGGGQVDITSGKF
VFSASEAWRIENGKLTYPVKGATLIGSGPEVLNYVSMIGNDLALDQGVGVCGKEGQSVPVGVGQPTLRIDGGLTVGGTGG

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=480, Percent_Identity=59.375, Blast_Score=533, Evalue=1e-152,
Organism=Escherichia coli, GI1790682, Length=403, Percent_Identity=21.8362282878412, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 50855; Mature: 50855

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDAFTIADELLLKPYGLDEAALERTLSHMRHHAVDYADLYFQYTRNEGWHLEEGIVKSG
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCHHCCCCCC
SFSIDQGVGVRAVAGDKTAFAYSDAINQDALTRAAEAVRAIGNAGGDGSAGAVEKRRPQS
CCCCCCCCCEEEECCCCCEEEEHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCC
LYPAIDPCHSLEAAAKVALLEKVEKLAKAIDPRVIQVMAGLAMEYDVVYVARHDGVRAAD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEEEEEEEECCCCCCCC
VRPLVRMSVSVIAEQNGRREQGASGGGGRFDLAYFDDAVVERYVREAVKQALVNLESRPA
CCHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PAGQMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSAFSGKMGERVAAPGVTVVDDGVMG
CCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCC
GRRGALAIDDEGNATQRTVLIEDGILKGYMQDAMNSRLMQVAPTGNGRRESYASIPMPRM
CCCCEEEECCCCCCCEEEEEEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC
TNTYMLAGERDPQEIIASVKDGLYAVNFGGGQVDITSGKFVFSASEAWRIENGKLTYPVK
CCEEEEECCCCHHHHHHHHHCCEEEEEECCCEEEEECCEEEEECCCCEEEECCEEEEEEC
GATLIGSGPEVLNYVSMIGNDLALDQGVGVCGKEGQSVPVGVGQPTLRIDGGLTVGGTGG
CCEEECCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCC
>Mature Secondary Structure
MQDAFTIADELLLKPYGLDEAALERTLSHMRHHAVDYADLYFQYTRNEGWHLEEGIVKSG
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCHHCCCCCC
SFSIDQGVGVRAVAGDKTAFAYSDAINQDALTRAAEAVRAIGNAGGDGSAGAVEKRRPQS
CCCCCCCCCEEEECCCCCEEEEHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCC
LYPAIDPCHSLEAAAKVALLEKVEKLAKAIDPRVIQVMAGLAMEYDVVYVARHDGVRAAD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEEEEEEEECCCCCCCC
VRPLVRMSVSVIAEQNGRREQGASGGGGRFDLAYFDDAVVERYVREAVKQALVNLESRPA
CCHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PAGQMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSAFSGKMGERVAAPGVTVVDDGVMG
CCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCC
GRRGALAIDDEGNATQRTVLIEDGILKGYMQDAMNSRLMQVAPTGNGRRESYASIPMPRM
CCCCEEEECCCCCCCEEEEEEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC
TNTYMLAGERDPQEIIASVKDGLYAVNFGGGQVDITSGKFVFSASEAWRIENGKLTYPVK
CCEEEEECCCCHHHHHHHHHCCEEEEEECCCEEEEECCEEEEECCCCEEEECCEEEEEEC
GATLIGSGPEVLNYVSMIGNDLALDQGVGVCGKEGQSVPVGVGQPTLRIDGGLTVGGTGG
CCEEECCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]