Click here to switch to the map view.

The map label for this gene is kstR2 [H]

Identifier: 34497546

GI number: 34497546

Start: 2278178

End: 2278792

Strand: Reverse

Name: kstR2 [H]

Synonym: CV_2091

Alternate gene names: 34497546

Gene position: 2278792-2278178 (Counterclockwise)

Preceding gene: 34497547

Following gene: 34497545

Centisome position: 47.96

GC content: 66.83

Gene sequence:

>615_bases
TTGTCCCCATCGCACAGGATTGACATGAGCCCAGTGGAACCCACCCGCCCCCCCGAGGAAAATGGCCGGCGCATGGAGCT
GGTCCGCGCCGCCGCCATCCTGTTCCGCGACCAGGGCTACGAACGCACCACCGTGCGCGACCTGGGCAACGCCGTCGGCA
TGCAGTCCGGCAGCCTGTTCTACCATTTCCGCACCAAGGAAGAAATCCTGGTGGCGGTGATGGCGCTGGGCATCACCAGC
ACCACCGAGCAGCTCGCCGCCGCGCTGGACGCCGCGCCCGACATCCGCGACAAGCTCGCCGCCCTGTTCCGCGTTCATCT
GAACTCCCTGCTGGGAGACAACCAGGCGGCGCTGGAAGTGATGCTGTACGAATGGCGCAGCGTGTCGGAATCCGCCAAAC
CCGGACTGGTGGTGCTGCGCGACCGCTACGAGACGCTGTGGCAGCAGGTGCTGGACGAGGCCGCCGACGCCGGCCTGGTC
AAGCGGGACACCCGTTTGCTGCGCCGCACGCTGCTGGGCAGCCTGCACTGGACCGTGCAATGGTATCGACGCGACGGCGA
GCTCGACGTGGATGCGCTGGCCCAGCGCATGTTGCAACTGGTACTGTTCGACTAG

Upstream 100 bases:

>100_bases
CCCTGTTTCGAGCGCAGCTGCCCGTACGGCCACACCGACTGCCTGGAAAAAATGCAGCCGGAGTTAGTGTGGCAGGCCGC
GCAACGACTACTCCCCTCGC

Downstream 100 bases:

>100_bases
ACAGGAAAAAACCTTATCAAAAGGGGAAAAATGTTCTAATATCAGCGATATAGGAACATTGGGACCCTAGCCATGGCAAA
TATCGCGAGCGTAGGCTACC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSPSHRIDMSPVEPTRPPEENGRRMELVRAAAILFRDQGYERTTVRDLGNAVGMQSGSLFYHFRTKEEILVAVMALGITS
TTEQLAAALDAAPDIRDKLAALFRVHLNSLLGDNQAALEVMLYEWRSVSESAKPGLVVLRDRYETLWQQVLDEAADAGLV
KRDTRLLRRTLLGSLHWTVQWYRRDGELDVDALAQRMLQLVLFD

Sequences:

>Translated_204_residues
MSPSHRIDMSPVEPTRPPEENGRRMELVRAAAILFRDQGYERTTVRDLGNAVGMQSGSLFYHFRTKEEILVAVMALGITS
TTEQLAAALDAAPDIRDKLAALFRVHLNSLLGDNQAALEVMLYEWRSVSESAKPGLVVLRDRYETLWQQVLDEAADAGLV
KRDTRLLRRTLLGSLHWTVQWYRRDGELDVDALAQRMLQLVLFD
>Mature_203_residues
SPSHRIDMSPVEPTRPPEENGRRMELVRAAAILFRDQGYERTTVRDLGNAVGMQSGSLFYHFRTKEEILVAVMALGITST
TEQLAAALDAAPDIRDKLAALFRVHLNSLLGDNQAALEVMLYEWRSVSESAKPGLVVLRDRYETLWQQVLDEAADAGLVK
RDTRLLRRTLLGSLHWTVQWYRRDGELDVDALAQRMLQLVLFD

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23135; Mature: 23004

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSHRIDMSPVEPTRPPEENGRRMELVRAAAILFRDQGYERTTVRDLGNAVGMQSGSLF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEE
YHFRTKEEILVAVMALGITSTTEQLAAALDAAPDIRDKLAALFRVHLNSLLGDNQAALEV
EEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
MLYEWRSVSESAKPGLVVLRDRYETLWQQVLDEAADAGLVKRDTRLLRRTLLGSLHWTVQ
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHE
WYRRDGELDVDALAQRMLQLVLFD
EEECCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPSHRIDMSPVEPTRPPEENGRRMELVRAAAILFRDQGYERTTVRDLGNAVGMQSGSLF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEE
YHFRTKEEILVAVMALGITSTTEQLAAALDAAPDIRDKLAALFRVHLNSLLGDNQAALEV
EEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
MLYEWRSVSESAKPGLVVLRDRYETLWQQVLDEAADAGLVKRDTRLLRRTLLGSLHWTVQ
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHE
WYRRDGELDVDALAQRMLQLVLFD
EEECCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA