| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497510
Identifier: 34497510
GI number: 34497510
Start: 2243544
End: 2244119
Strand: Reverse
Name: 34497510
Synonym: CV_2055
Alternate gene names: NA
Gene position: 2244119-2243544 (Counterclockwise)
Preceding gene: 34497511
Following gene: 34497509
Centisome position: 47.23
GC content: 68.58
Gene sequence:
>576_bases ATGAAGCAAATGTTGTTCTGGCAGCGCCTGGACTGCCCGGGACTGGAGCAGGCGGAAATCGAAACCGGCGCCGGACTTTC CCTTTCCGCCAGCGGCAGCCTGCTGCACGCCGACACCGGCGCCAGCCTGCGCTACCGGATGCAGCTGGATCACCACGGCA GGCTCAGCCACGCCCACATCGACCTCTCCGCGCCCGACGCGCGCCAACTGACGCTGCAGCACGCCGAAACCGGCCGCTGG CTGGTCAACGGCCAGCCGGAACCGGCCTGGGACGGCTGCCCGGAGCTGGATCTGCAGGCCTGCGGCCTGACCAATGCTTT CCCCATACGCCGGCTGAAGCTGGCGGTCGGCGACAGCGCCGAGCTGTCGATGCTGTTCATCCGGCTGCCCGCCCTGACGC CCGCCGTCTGTCCGCAGCGCTACACCCGACTGCCGGACCGCGACGGCATGCCCTGCTACCGCTATGAATCCCCGGGCTTC GCCGCCGACATCGTCGTCGACCAGCAGGGCTTCACCGTCCATTACAGCGACTTCCTGCAACGGCTGCCCGCGGCGGCCGC GACTGAGCGAAAGTAA
Upstream 100 bases:
>100_bases ATCGGACCGGAAGACCAGGCCTTCGTGCCGCTGGAGAAACGCTGAGCCATGCAGCAAGCGACGCGGCCGGACAGCCGCGT CGGCAAGACTGGAGCAGTCA
Downstream 100 bases:
>100_bases ACACATGAACCGCCAATACCGTACCGCCCTGCCCGGCACCGGGCTGGATTATTTCGACGCCCGCGCCGCCGTGGAGGCCA TCCGGCCCGGCGCCTGGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKQMLFWQRLDCPGLEQAEIETGAGLSLSASGSLLHADTGASLRYRMQLDHHGRLSHAHIDLSAPDARQLTLQHAETGRW LVNGQPEPAWDGCPELDLQACGLTNAFPIRRLKLAVGDSAELSMLFIRLPALTPAVCPQRYTRLPDRDGMPCYRYESPGF AADIVVDQQGFTVHYSDFLQRLPAAAATERK
Sequences:
>Translated_191_residues MKQMLFWQRLDCPGLEQAEIETGAGLSLSASGSLLHADTGASLRYRMQLDHHGRLSHAHIDLSAPDARQLTLQHAETGRW LVNGQPEPAWDGCPELDLQACGLTNAFPIRRLKLAVGDSAELSMLFIRLPALTPAVCPQRYTRLPDRDGMPCYRYESPGF AADIVVDQQGFTVHYSDFLQRLPAAAATERK >Mature_191_residues MKQMLFWQRLDCPGLEQAEIETGAGLSLSASGSLLHADTGASLRYRMQLDHHGRLSHAHIDLSAPDARQLTLQHAETGRW LVNGQPEPAWDGCPELDLQACGLTNAFPIRRLKLAVGDSAELSMLFIRLPALTPAVCPQRYTRLPDRDGMPCYRYESPGF AADIVVDQQGFTVHYSDFLQRLPAAAATERK
Specific function: Unknown
COG id: COG3554
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21154; Mature: 21154
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQMLFWQRLDCPGLEQAEIETGAGLSLSASGSLLHADTGASLRYRMQLDHHGRLSHAHI CCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEEECCCCCEEEEEE DLSAPDARQLTLQHAETGRWLVNGQPEPAWDGCPELDLQACGLTNAFPIRRLKLAVGDSA ECCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEECCCC ELSMLFIRLPALTPAVCPQRYTRLPDRDGMPCYRYESPGFAADIVVDQQGFTVHYSDFLQ CEEEEEEECCCCCHHCCCHHHHCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEHHHHHH RLPAAAATERK HCCCCCCCCCC >Mature Secondary Structure MKQMLFWQRLDCPGLEQAEIETGAGLSLSASGSLLHADTGASLRYRMQLDHHGRLSHAHI CCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEEECCCCCEEEEEE DLSAPDARQLTLQHAETGRWLVNGQPEPAWDGCPELDLQACGLTNAFPIRRLKLAVGDSA ECCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEECCCC ELSMLFIRLPALTPAVCPQRYTRLPDRDGMPCYRYESPGFAADIVVDQQGFTVHYSDFLQ CEEEEEEECCCCCHHCCCHHHHCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEHHHHHH RLPAAAATERK HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA