| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is fixI [H]
Identifier: 34497497
GI number: 34497497
Start: 2225969
End: 2228395
Strand: Reverse
Name: fixI [H]
Synonym: CV_2042
Alternate gene names: 34497497
Gene position: 2228395-2225969 (Counterclockwise)
Preceding gene: 34497499
Following gene: 34497496
Centisome position: 46.9
GC content: 71.03
Gene sequence:
>2427_bases ATGAGCGAGAACTGTTTCCATTGCGGTTTGCCGGTGCCCGCCGGCGCCAGCTTCCCCATCCGCTACCGCCAGCGCGAAGA GCCCGCCTGCTGCGCCGGCTGCCAGGCGGTGGCCGCCACCATCATCGAATCCGGCCTGTCCGACTACTACAAGCACCGCA CCGAGGGCGCGGCCCGCGCCGAGGCGCTGCCGCAAGCGGTGCTGGAGCAGATCAAGCTGTACGACAGCGAGGAGCTGCAG CGCGGCTTCGTCCGCGTCGAGAGCGAAAACATCCGCGAAGCCTCGCTGATGCTGGAAGGCATCACCTGCGCCGCCTGCAT CTGGCTGAACGAGCAGCACATCCGCCGCCTGCCCGGCGTGCTGGGCGTAGACATCAACTACAGCACCCAGCGCGCCCGCG TGCGCTGGGACAACGGCCGCGTGCAGCTGTCCGCCATCCTGGAGGCGGTGGCGGCGATAGGCTATCGCGCCCATCCCTAC GACGCCGACCGCCAGGAAAAGCTGCAACAGAAGGAGCGCAAGCAGGCGCTGACCCGGCTGTGGGTGGCCGGCCTGTCGAT GATGCAGGTGATGATGTACGCGGTGCCGGTCTATCTGGCGCCGGACGGCGACATCGCGCCCGATTTCCTGTGGCTGCTGC ACTGGTCCAGCTTCATCCTGACGCTGCCGGTGCTGCTGTATTCGGCCCTGCCCTTCTACCGCAACACCTGGCGCGACTTG AAAACCGGCCGCGTCGGCATGGACACGCCGGTCAGCATCGGCATCCTCACCGCCTTCGCCGCCAGCTTCTGGGCGCTGAT CCACAAGGTGGAGCATGGCATCTACTTCGACTCGGTGTCGATGTTCGTCTTCCTGCTGCTGGGCGGCCGCTACCTGGAAG GCATCGCCCGCCGCAAGGCCGGCGCCGCCAGCGAAAGCCTGGTCAAGCTGGTGCCGGCCTTCGCCCACCGGCTGGACAAC TGGCCGCACAGCCGGGACAGCCGCGAGGCCACGGTGGCCGGCCTGAACCCCGGCGACGTGATCCTGGTCAAGCCCGGCGA AACCATTCCCGCCGACGGCGTGGTGCTGGACGGCCGCAGCGCCAGCAACGAATCGCTGCTCACCGGCGAGAGCCGCCCCA TCGCCAAAGCGCCCGGCGACGCGGTGATCGCCGGCAGCGTCAACACCTCCAGCCCGCTGGTGCTGCGCGTGGAACAGGCG GGCCAATCCACCCGGCTGGCCGGCATCGTGCGGCTGCTGGACCAGGCGCTGGCGGAAAAACCCCGGCTGGCCGTGCTGGC CGACCGCTTCGCCAGCTGGTTCGTCGCGTTCTTGCTGCTGGCCGCCGCCGGCAGCTACATCGGCTGGCATTTCATAGACC CAGGCCGCGCGCTGTGGATCATGGTGGCGGTGCTGGTCATCTCCTGCCCCTGCGCGTTGTCGCTGGCCACCCCGGCCGCG CTCACCGCCGCCAGCGGCCGCCTGGCCTCGCTGGGCGTGCTGACCACCCGCGGCCACGCGCTGGAAACGCTGGCCAAGGC GGACGACGCGGTGTTCGACAAGACCGGCACCCTCACCCACGGCCAGATGCGGCTGCTGGAAACGCGCGGCCCGCTGGACG CGCACCGCGCGCTGGCTGTCGCCGCCGCGCTGGAACAGGGATCCGAGCACCCGCTGGCGCAGGCCATCCTGGCCGCCGCG CCGGCGGACAGGCCGCAGGCGGACGGCTTGATCAACCACCCCGGCGGCGGCGTGGCCGGCGGCGTAGACGGCCGCGAGTG GCGGCTCGGCTCCGCCCCCTTCATCGCCGCCTGGCTGGGCCGCGAAGTGGACGAGGACGCCGGCTGGCAGCCGGACTGCA CCCAGGTGCTGCTGGCGGACGCCGACGGCGTGCAGGCCCGCTTCGCCATCGGCGACGCCTGCCGCGACGACGCGGCGGCG CTGATGGCCGAATTGACTCGCCGCGGACTGGCCGTCCATCTGCTCAGCGGCGACGGCGAAGGCCCGGTGGCCGGACTGGC CGCCAGGCTCGGCATCACGCGGTGGCGCTCGCGCGCGACGCCGGAAGACAAGCTCGCCTACGTCGCCGCGCTGCAGGCCA AGGGACGGCGAGTGCTGATGGTCGGCGACGGCGTCAACGACGCGCCGGTGCTGGCGCGCGCCGACGTGTCCATCGCCATG GGCGGCGGCACCGACGTCGCCCGCGCCAGCGGCGACATGGTGCTGATGGGCGACCGGCTGGGCCTGATCGGCGATTCCCT GGTCCTCAGCCGGCGCGCGCTGGCGGTGATCCGGCAGAACCTTGTCTGGGCGGCCGGGTATAATGTCGTCGCGCTGCCGC TGGCGATGCTGGGCCACGTCACGCCCTGGCTGGCCAGCCTGGGCATGGCCCTGAGCTCGCTGTTGGTGGTCGGCAACGCA TTGCGTCTCGTCAAACGGAATCCCTGA
Upstream 100 bases:
>100_bases GCCCCGAGCGCAAGCGCCGCGTTGAAATAATCCGCATCGAAAAACATTGCCATGCGCTGGATCAAGCATCGCGCGCCGGC TTTGATTACAATCCTACGTC
Downstream 100 bases:
>100_bases TGGAAAGCCTCTACCTGCTCATCCCGCTCAGCCTGGTGCTGGTCTTCGTGATCGGCGCCATTTTCTGGTGGGCCACCCGC TCCGGCCAGTTCGACGACAT
Product: cation transport P-type ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: E1-E2 type cation ATPase FixI [H]
Number of amino acids: Translated: 808; Mature: 807
Protein sequence:
>808_residues MSENCFHCGLPVPAGASFPIRYRQREEPACCAGCQAVAATIIESGLSDYYKHRTEGAARAEALPQAVLEQIKLYDSEELQ RGFVRVESENIREASLMLEGITCAACIWLNEQHIRRLPGVLGVDINYSTQRARVRWDNGRVQLSAILEAVAAIGYRAHPY DADRQEKLQQKERKQALTRLWVAGLSMMQVMMYAVPVYLAPDGDIAPDFLWLLHWSSFILTLPVLLYSALPFYRNTWRDL KTGRVGMDTPVSIGILTAFAASFWALIHKVEHGIYFDSVSMFVFLLLGGRYLEGIARRKAGAASESLVKLVPAFAHRLDN WPHSRDSREATVAGLNPGDVILVKPGETIPADGVVLDGRSASNESLLTGESRPIAKAPGDAVIAGSVNTSSPLVLRVEQA GQSTRLAGIVRLLDQALAEKPRLAVLADRFASWFVAFLLLAAAGSYIGWHFIDPGRALWIMVAVLVISCPCALSLATPAA LTAASGRLASLGVLTTRGHALETLAKADDAVFDKTGTLTHGQMRLLETRGPLDAHRALAVAAALEQGSEHPLAQAILAAA PADRPQADGLINHPGGGVAGGVDGREWRLGSAPFIAAWLGREVDEDAGWQPDCTQVLLADADGVQARFAIGDACRDDAAA LMAELTRRGLAVHLLSGDGEGPVAGLAARLGITRWRSRATPEDKLAYVAALQAKGRRVLMVGDGVNDAPVLARADVSIAM GGGTDVARASGDMVLMGDRLGLIGDSLVLSRRALAVIRQNLVWAAGYNVVALPLAMLGHVTPWLASLGMALSSLLVVGNA LRLVKRNP
Sequences:
>Translated_808_residues MSENCFHCGLPVPAGASFPIRYRQREEPACCAGCQAVAATIIESGLSDYYKHRTEGAARAEALPQAVLEQIKLYDSEELQ RGFVRVESENIREASLMLEGITCAACIWLNEQHIRRLPGVLGVDINYSTQRARVRWDNGRVQLSAILEAVAAIGYRAHPY DADRQEKLQQKERKQALTRLWVAGLSMMQVMMYAVPVYLAPDGDIAPDFLWLLHWSSFILTLPVLLYSALPFYRNTWRDL KTGRVGMDTPVSIGILTAFAASFWALIHKVEHGIYFDSVSMFVFLLLGGRYLEGIARRKAGAASESLVKLVPAFAHRLDN WPHSRDSREATVAGLNPGDVILVKPGETIPADGVVLDGRSASNESLLTGESRPIAKAPGDAVIAGSVNTSSPLVLRVEQA GQSTRLAGIVRLLDQALAEKPRLAVLADRFASWFVAFLLLAAAGSYIGWHFIDPGRALWIMVAVLVISCPCALSLATPAA LTAASGRLASLGVLTTRGHALETLAKADDAVFDKTGTLTHGQMRLLETRGPLDAHRALAVAAALEQGSEHPLAQAILAAA PADRPQADGLINHPGGGVAGGVDGREWRLGSAPFIAAWLGREVDEDAGWQPDCTQVLLADADGVQARFAIGDACRDDAAA LMAELTRRGLAVHLLSGDGEGPVAGLAARLGITRWRSRATPEDKLAYVAALQAKGRRVLMVGDGVNDAPVLARADVSIAM GGGTDVARASGDMVLMGDRLGLIGDSLVLSRRALAVIRQNLVWAAGYNVVALPLAMLGHVTPWLASLGMALSSLLVVGNA LRLVKRNP >Mature_807_residues SENCFHCGLPVPAGASFPIRYRQREEPACCAGCQAVAATIIESGLSDYYKHRTEGAARAEALPQAVLEQIKLYDSEELQR GFVRVESENIREASLMLEGITCAACIWLNEQHIRRLPGVLGVDINYSTQRARVRWDNGRVQLSAILEAVAAIGYRAHPYD ADRQEKLQQKERKQALTRLWVAGLSMMQVMMYAVPVYLAPDGDIAPDFLWLLHWSSFILTLPVLLYSALPFYRNTWRDLK TGRVGMDTPVSIGILTAFAASFWALIHKVEHGIYFDSVSMFVFLLLGGRYLEGIARRKAGAASESLVKLVPAFAHRLDNW PHSRDSREATVAGLNPGDVILVKPGETIPADGVVLDGRSASNESLLTGESRPIAKAPGDAVIAGSVNTSSPLVLRVEQAG QSTRLAGIVRLLDQALAEKPRLAVLADRFASWFVAFLLLAAAGSYIGWHFIDPGRALWIMVAVLVISCPCALSLATPAAL TAASGRLASLGVLTTRGHALETLAKADDAVFDKTGTLTHGQMRLLETRGPLDAHRALAVAAALEQGSEHPLAQAILAAAP ADRPQADGLINHPGGGVAGGVDGREWRLGSAPFIAAWLGREVDEDAGWQPDCTQVLLADADGVQARFAIGDACRDDAAAL MAELTRRGLAVHLLSGDGEGPVAGLAARLGITRWRSRATPEDKLAYVAALQAKGRRVLMVGDGVNDAPVLARADVSIAMG GGTDVARASGDMVLMGDRLGLIGDSLVLSRRALAVIRQNLVWAAGYNVVALPLAMLGHVTPWLASLGMALSSLLVVGNAL RLVKRNP
Specific function: FixI is a pump of a specific cation involved in symbiotic nitrogen fixation. The four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=781, Percent_Identity=31.4980793854033, Blast_Score=308, Evalue=2e-83, Organism=Homo sapiens, GI115529486, Length=813, Percent_Identity=29.8892988929889, Blast_Score=306, Evalue=7e-83, Organism=Homo sapiens, GI55743073, Length=594, Percent_Identity=31.8181818181818, Blast_Score=222, Evalue=9e-58, Organism=Homo sapiens, GI118498343, Length=172, Percent_Identity=31.9767441860465, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1786691, Length=745, Percent_Identity=33.6912751677852, Blast_Score=325, Evalue=7e-90, Organism=Escherichia coli, GI1789879, Length=734, Percent_Identity=31.7438692098093, Blast_Score=249, Evalue=6e-67, Organism=Escherichia coli, GI1786914, Length=487, Percent_Identity=29.5687885010267, Blast_Score=130, Evalue=3e-31, Organism=Escherichia coli, GI2367363, Length=170, Percent_Identity=25.8823529411765, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17556548, Length=777, Percent_Identity=27.027027027027, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI32566766, Length=187, Percent_Identity=25.668449197861, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17557770, Length=187, Percent_Identity=25.668449197861, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17557486, Length=92, Percent_Identity=38.0434782608696, Blast_Score=68, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320475, Length=763, Percent_Identity=28.4403669724771, Blast_Score=269, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6319772, Length=633, Percent_Identity=29.3838862559242, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6321430, Length=534, Percent_Identity=24.9063670411985, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6325221, Length=534, Percent_Identity=24.5318352059925, Blast_Score=95, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6321271, Length=179, Percent_Identity=29.608938547486, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321432, Length=108, Percent_Identity=36.1111111111111, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI221329854, Length=559, Percent_Identity=31.484794275492, Blast_Score=224, Evalue=2e-58, Organism=Drosophila melanogaster, GI281366676, Length=109, Percent_Identity=35.7798165137615, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 86462; Mature: 86330
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS00154 ATPASE_E1_E2 ; PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENCFHCGLPVPAGASFPIRYRQREEPACCAGCQAVAATIIESGLSDYYKHRTEGAARA CCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH EALPQAVLEQIKLYDSEELQRGFVRVESENIREASLMLEGITCAACIWLNEQHIRRLPGV HHHHHHHHHHHHHCCHHHHHHHHEEECCCCCHHHHHHHHCCCEEEEEEECHHHHHHCCCC LGVDINYSTQRARVRWDNGRVQLSAILEAVAAIGYRAHPYDADRQEKLQQKERKQALTRL EEEECCCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH WVAGLSMMQVMMYAVPVYLAPDGDIAPDFLWLLHWSSFILTLPVLLYSALPFYRNTWRDL HHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH KTGRVGMDTPVSIGILTAFAASFWALIHKVEHGIYFDSVSMFVFLLLGGRYLEGIARRKA HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHC GAASESLVKLVPAFAHRLDNWPHSRDSREATVAGLNPGDVILVKPGETIPADGVVLDGRS CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCEEECCCC ASNESLLTGESRPIAKAPGDAVIAGSVNTSSPLVLRVEQAGQSTRLAGIVRLLDQALAEK CCCCCEECCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC PRLAVLADRFASWFVAFLLLAAAGSYIGWHFIDPGRALWIMVAVLVISCPCALSLATPAA CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHCCCHH LTAASGRLASLGVLTTRGHALETLAKADDAVFDKTGTLTHGQMRLLETRGPLDAHRALAV HHHCCCCHHEEEEEECCCHHHHHHHHCCHHHHCCCCCCCCCHHEEECCCCCCHHHHHHHH AAALEQGSEHPLAQAILAAAPADRPQADGLINHPGGGVAGGVDGREWRLGSAPFIAAWLG HHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHC REVDEDAGWQPDCTQVLLADADGVQARFAIGDACRDDAAALMAELTRRGLAVHLLSGDGE CCCCCCCCCCCCCCEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHCCEEEEEECCCCC GPVAGLAARLGITRWRSRATPEDKLAYVAALQAKGRRVLMVGDGVNDAPVLARADVSIAM CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCEEEEE GGGTDVARASGDMVLMGDRLGLIGDSLVLSRRALAVIRQNLVWAAGYNVVALPLAMLGHV CCCCCHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH TPWLASLGMALSSLLVVGNALRLVKRNP HHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SENCFHCGLPVPAGASFPIRYRQREEPACCAGCQAVAATIIESGLSDYYKHRTEGAARA CCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH EALPQAVLEQIKLYDSEELQRGFVRVESENIREASLMLEGITCAACIWLNEQHIRRLPGV HHHHHHHHHHHHHCCHHHHHHHHEEECCCCCHHHHHHHHCCCEEEEEEECHHHHHHCCCC LGVDINYSTQRARVRWDNGRVQLSAILEAVAAIGYRAHPYDADRQEKLQQKERKQALTRL EEEECCCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH WVAGLSMMQVMMYAVPVYLAPDGDIAPDFLWLLHWSSFILTLPVLLYSALPFYRNTWRDL HHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH KTGRVGMDTPVSIGILTAFAASFWALIHKVEHGIYFDSVSMFVFLLLGGRYLEGIARRKA HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHC GAASESLVKLVPAFAHRLDNWPHSRDSREATVAGLNPGDVILVKPGETIPADGVVLDGRS CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCEEECCCC ASNESLLTGESRPIAKAPGDAVIAGSVNTSSPLVLRVEQAGQSTRLAGIVRLLDQALAEK CCCCCEECCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC PRLAVLADRFASWFVAFLLLAAAGSYIGWHFIDPGRALWIMVAVLVISCPCALSLATPAA CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHCCCHH LTAASGRLASLGVLTTRGHALETLAKADDAVFDKTGTLTHGQMRLLETRGPLDAHRALAV HHHCCCCHHEEEEEECCCHHHHHHHHCCHHHHCCCCCCCCCHHEEECCCCCCHHHHHHHH AAALEQGSEHPLAQAILAAAPADRPQADGLINHPGGGVAGGVDGREWRLGSAPFIAAWLG HHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHC REVDEDAGWQPDCTQVLLADADGVQARFAIGDACRDDAAALMAELTRRGLAVHLLSGDGE CCCCCCCCCCCCCCEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHCCEEEEEECCCCC GPVAGLAARLGITRWRSRATPEDKLAYVAALQAKGRRVLMVGDGVNDAPVLARADVSIAM CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCEEEEE GGGTDVARASGDMVLMGDRLGLIGDSLVLSRRALAVIRQNLVWAAGYNVVALPLAMLGHV CCCCCHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH TPWLASLGMALSSLLVVGNALRLVKRNP HHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8661920; 12597275 [H]