Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497483

Identifier: 34497483

GI number: 34497483

Start: 2209987

End: 2210727

Strand: Direct

Name: 34497483

Synonym: CV_2028

Alternate gene names: NA

Gene position: 2209987-2210727 (Clockwise)

Preceding gene: 34497482

Following gene: 34497484

Centisome position: 46.52

GC content: 69.23

Gene sequence:

>741_bases
ATGAAGCGGCTGCGCCATCCGCTGCTGCAGCTGTCGGCCTGCGCCTGCGCCTGGATGTTCGTCGCGCCCGCGCTGCATCT
GTTGCCATGGGCGGCATTGCAGGGCCTGTTCGCCGGCCTGCTCGCCATCTTGCTGAGGCTGCCCAGCTGGCAGCGCATCG
CGCATGGGCTGTTTGTGCCCGCGGCGGCGCTGGCCAGCCAGGCCGGCATCGCGCCGGGCTGGTACCTGGCGGCGCTGCTG
CTGACGCTGGCGTTGGGCCGCAACGCGCTGGTGGAGCGGGTGCCGCTCTATCGTTCCGCGGCTCTGGTCGCGGAACGGTT
GGCCGAGCGCCTGGCCGGGGATGCGTCCCTGCTCGAGGCCGGCTGCGGCGACGGCAGGCTGGCCCTGCAGTTGTCGCAGC
GTCGGCCGGACTTGCGCATGCGCGCGCTGGAGAACGCCGTCGGCAGCTGGCTGCTGGCGCGCTGGCGCTGGCTGCGGGCC
GGGAAGCCGAGCCAGCTGGCATTCGCCTGCCGCAATTTCTGGAATGAGGATTGGGGGGGGTATGACGCGGTCTACGTGTT
CCTGTCGCCGGAACCCATGCCCAGGGTCTGGCGCAAGTTCGTCGCCGAGGGCCGGCCCGGGAGCCTGCTCATCAGCAACA
CTTTTCCCGTGCCCGGCGTCGCGCCGGATGAATGCATTCCGCTCGAAGGCCCTTTGCAAAAAGAACTACTGATCTGGCGC
CATCCAAATGGACCTCGATAA

Upstream 100 bases:

>100_bases
CTCAACGACGGTTTCAAGCCGCAGATGAACCAGGACGTGATAGGCGGGCCGTCGGAAGGCGCGGCCCCGGCCGCGCCGCA
GCAGGGCGAGCCCTGAGCGC

Downstream 100 bases:

>100_bases
CTGGACCAAGACCATCGCCGAACGGCGCTGGGCCATATTGCCCGACACGCTGAACGAGCTGCGCGATGCCTGCGCCCGCC
ACAGCGACCTGATCAACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKRLRHPLLQLSACACAWMFVAPALHLLPWAALQGLFAGLLAILLRLPSWQRIAHGLFVPAAALASQAGIAPGWYLAALL
LTLALGRNALVERVPLYRSAALVAERLAERLAGDASLLEAGCGDGRLALQLSQRRPDLRMRALENAVGSWLLARWRWLRA
GKPSQLAFACRNFWNEDWGGYDAVYVFLSPEPMPRVWRKFVAEGRPGSLLISNTFPVPGVAPDECIPLEGPLQKELLIWR
HPNGPR

Sequences:

>Translated_246_residues
MKRLRHPLLQLSACACAWMFVAPALHLLPWAALQGLFAGLLAILLRLPSWQRIAHGLFVPAAALASQAGIAPGWYLAALL
LTLALGRNALVERVPLYRSAALVAERLAERLAGDASLLEAGCGDGRLALQLSQRRPDLRMRALENAVGSWLLARWRWLRA
GKPSQLAFACRNFWNEDWGGYDAVYVFLSPEPMPRVWRKFVAEGRPGSLLISNTFPVPGVAPDECIPLEGPLQKELLIWR
HPNGPR
>Mature_246_residues
MKRLRHPLLQLSACACAWMFVAPALHLLPWAALQGLFAGLLAILLRLPSWQRIAHGLFVPAAALASQAGIAPGWYLAALL
LTLALGRNALVERVPLYRSAALVAERLAERLAGDASLLEAGCGDGRLALQLSQRRPDLRMRALENAVGSWLLARWRWLRA
GKPSQLAFACRNFWNEDWGGYDAVYVFLSPEPMPRVWRKFVAEGRPGSLLISNTFPVPGVAPDECIPLEGPLQKELLIWR
HPNGPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27188; Mature: 27188

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLRHPLLQLSACACAWMFVAPALHLLPWAALQGLFAGLLAILLRLPSWQRIAHGLFVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AAALASQAGIAPGWYLAALLLTLALGRNALVERVPLYRSAALVAERLAERLAGDASLLEA
HHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
GCGDGRLALQLSQRRPDLRMRALENAVGSWLLARWRWLRAGKPSQLAFACRNFWNEDWGG
CCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
YDAVYVFLSPEPMPRVWRKFVAEGRPGSLLISNTFPVPGVAPDECIPLEGPLQKELLIWR
CEEEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE
HPNGPR
CCCCCC
>Mature Secondary Structure
MKRLRHPLLQLSACACAWMFVAPALHLLPWAALQGLFAGLLAILLRLPSWQRIAHGLFVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AAALASQAGIAPGWYLAALLLTLALGRNALVERVPLYRSAALVAERLAERLAGDASLLEA
HHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
GCGDGRLALQLSQRRPDLRMRALENAVGSWLLARWRWLRAGKPSQLAFACRNFWNEDWGG
CCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
YDAVYVFLSPEPMPRVWRKFVAEGRPGSLLISNTFPVPGVAPDECIPLEGPLQKELLIWR
CEEEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE
HPNGPR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA